https://github.com/fgcz/specl
prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 2 DOI reference(s) in README -
○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.1%) to scientific vocabulary
Keywords
dda
dia
mass-spectrometry
proteomics
Last synced: 4 months ago
·
JSON representation
Repository
prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
Basic Info
- Host: GitHub
- Owner: fgcz
- Language: R
- Default Branch: master
- Homepage: https://bioconductor.org/packages/specL
- Size: 1.86 MB
Statistics
- Stars: 1
- Watchers: 2
- Forks: 1
- Open Issues: 1
- Releases: 0
Topics
dda
dia
mass-spectrometry
proteomics
Created about 3 years ago
· Last pushed about 3 years ago
Metadata Files
Readme
README.md
specL
prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
Talks
Owner
- Name: Functional Genomics Center UZH|ETH Zurich
- Login: fgcz
- Kind: organization
- Email: protinf@fgcz.ethz.ch
- Location: Switzerland
- Website: https://fgcz.ch
- Repositories: 10
- Profile: https://github.com/fgcz
proteome informatics FGCZ
GitHub Events
Total
Last Year
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 1
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- HijaziHassan (1)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Dependencies
DESCRIPTION
cran
- DBI >= 0.5 depends
- R >= 4.1 depends
- RSQLite >= 1.1 depends
- methods >= 3.3 depends
- protViz >= 0.7 depends
- seqinr >= 3.3 depends
- BiocGenerics * suggests
- BiocStyle >= 2.2 suggests
- RUnit >= 0.4 suggests
- knitr >= 1.15 suggests
- rmarkdown * suggests
inst/Dockerfile
docker
- bioconductor/release_core2 latest build