A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments - Version for publication in JOSS

This release has addressed the comments of the reviewers of the Journal of Open Source Software (JOSS). It is meant to be archived on Zenodo to provide a citable persistent DOI.

Scientific Software - Peer-reviewed - Python
Published by mgalland over 6 years ago

A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments - Version released during the JOSS review process

This release is part of the review process for the publication in the Journal of Open Source Software.
https://github.com/openjournals/joss-reviews/issues/1465. Fixed some issues with formatting for the publication.

Scientific Software - Peer-reviewed - Python
Published by mgalland almost 7 years ago

A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments - Clean first release

• Removed unnecessary scripts and mapped bam files

Scientific Software - Peer-reviewed - Python
Published by JihedC about 7 years ago

A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments - Snakemake ChIP-seq Paired-end pipeline

First release of the Snakemake ChIP-seq PE pipeline! Youpi!

Scientific Software - Peer-reviewed - Python
Published by JihedC about 7 years ago

A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments - Pre-release of the ChIP-seq PE pipeline

This release is a pre-release of the snakemake ChIP-seq analysis pipeline in order to be tested on real data sample before merging to the master branch.

Scientific Software - Peer-reviewed - Python
Published by JihedC over 7 years ago