2023-invasion_modules
Data and code for the study: Dijoux, S., Pichon, N. A., Sentis, A. and Boukal, D. S. (2024). Body size and trophic position determine the outcomes of species invasions along temperature and productivity gradients. Ecology Letters, 27, e14310.
Science Score: 67.0%
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 2 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Academic email domains
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.7%) to scientific vocabulary
Repository
Data and code for the study: Dijoux, S., Pichon, N. A., Sentis, A. and Boukal, D. S. (2024). Body size and trophic position determine the outcomes of species invasions along temperature and productivity gradients. Ecology Letters, 27, e14310.
Basic Info
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 1
Metadata Files
README.md
2023-Invasion_modules
Overview
This repository gathers the codes and data we used in the study: Dijoux, S., Pichon, N. A., Sentis, A. and Boukal, D. S. (2024). Body size and trophic position determine the outcomes of species invasions: along temperature and productivity gradients. Ecology Letters, 27, e14310.
Published version available on Ecology Letters: https://doi.org/10.1111/ele.14310
Preprint version on Authorea
Codes and data generated and transformed in the study are separated in their respective folders.
Authors & Contact details:
Samuel Dijoux (dijous00@prf.jcu.cz),
Noémie A. Pichon (noemie.pichon@wsl.ch),
Arnaud Sentis (arnaud.sentis@inrae.fr),
David S. Boukal (dboukal@prf.jcu.cz).
Responsible of data collection, codes development and online upload: Samuel Dijoux.
Cite the code:
Brief summary of the study
This study investigates the multiple influences of invading species in simple communities (consumer-resource systems) that are subject to environmental gradients (temperatures and nutrient enrichment) and community size structure. We developed biomass-based models of community dynamics to investigate the influences of invader traits (body mass and trophic position) on community changes in composition, diversity and stability regime. We compare four food web modules consisting of three species (apparent and exploitative competition, trophic chain, intraguild predation), thus summarizing all trophic interactions formed between local communities and invading species.
Layout
The repository is split into two main directories, each containing a descriptive README.md: * code: all codes used in the study for the analyses, data transformation, and figure illustrations. * data: all data generated and transformed.
This repository was built following the cross-post by Daniel I. Bolnick, Roger Schürch, Daniel Vedder, Daniel Vedder, Leron Perez and Robert Montgomerie, and the GitHub Template by Griffin Chure: https://github.com/gchure/reproducible_research.
Owner
- Name: Samuel Dijoux
- Login: Samuel-Dijoux
- Kind: user
- Location: Czech Republic
- Company: Dept. Ecosystem Biology/University South Bohemia
- Website: https://kbe.prf.jcu.cz/en/samuel-dijoux
- Twitter: Sam_Dijoux
- Repositories: 2
- Profile: https://github.com/Samuel-Dijoux
PhD Candidate at the Dept. Ecosystem Biology of the University South Bohemia
Citation (CITATION.cff)
cff-version: 1.0.0
message: "If you use our code and data in the present repository, please cite it as below."
authors:
- family-names: "Dijoux"
given-names: "Samuel"
orcid: "https://orcid.org/0000-0002-8086-7696"
- family-names: "Pichon"
given-names: "Noémie A."
orcid: "https://orcid.org/0000-0003-2972-1912"
- family-names: "Sentis"
given-names: "Arnaud"
orcid: "https://orcid.org/0000-0003-4617-3620"
- family-names: "Boukal"
given-names: "David S."
orcid: "https://orcid.org/0000-0001-8181-7458"
title: "Code and data: "Body size and trophic position
determine the outcomes of species invasions along
temperature and productivity gradients"."
version: 2.0.1
doi: 10.5281/zenodo.8296873
date-released: 2023-08-29
url: "https://doi.org/10.5281/zenodo.8296873"