mummerprocessing

Program to help process MUMmer outputs

https://github.com/alvarortor/mummerprocessing

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (3.2%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Program to help process MUMmer outputs

Basic Info
  • Host: GitHub
  • Owner: Alvarortor
  • Language: Perl
  • Default Branch: main
  • Size: 15.6 KB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created over 2 years ago · Last pushed about 2 years ago
Metadata Files
Readme Citation

README.md

MUMmerProcessing

Program to help process MUMmer outputs

8/23/2023 Output is set up so Excel is able to filter materials from longest to shortest sequence. Will be updated later on as I'm able to autoBLAST. 8/29/2023 Added Proofing program at end to check for any issues, also modified how lines are read to remove header and trailer lines.

Notes are also provided in file

Please cite if you use

Owner

  • Login: Alvarortor
  • Kind: user

Citation (Citation.cff)

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Ortola Tortosa"
  given-names: "Alvaro"
orcid: "https://orcid.org/0009-0007-4907-5512"
title: "MUM2Seq"
date-released: 2023-08-24
url: "https://github.com/Alvarortor/MUMmerProcessing"

GitHub Events

Total
Last Year