siena3d
Spectroastrometric analysis tool for Ionised gas Emission in Nearby AGN.
Science Score: 44.0%
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○Scientific vocabulary similarity
Low similarity (15.0%) to scientific vocabulary
Repository
Spectroastrometric analysis tool for Ionised gas Emission in Nearby AGN.
Basic Info
- Host: GitHub
- Owner: nicowinkel
- License: bsd-3-clause
- Language: Python
- Default Branch: main
- Homepage: https://nicowinkel.github.io/Siena3D
- Size: 30.5 MB
Statistics
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 1
Metadata Files
README.md
Siena3D
Scope
Siena3D is a tool to analyse the morphology of the ionised gas emission in 3D spectroscopic data cubes. It uses a set of emission lines to decompose an input spectrum and trace the components via their kinematics. This allows to resolve and characterize the individual components with a sub-pixel resolution, well below the width of the point spread function.
Siena3D was originally developed to analyse the extended emission line region (EELR) in unobscured AGN obtained with ESO VLT/MUSE. However, the method may also be applied to other science cases or IFU data that were aquired with other instruments.
Installation
The easiest way to install is to first create a dedicated conda environment prior to the installation:
conda create --name siena3d python=3.9
conda activate Siena3D
In order to install Siena3D, first clone the repository with
git clone https://github.com/nicowinkel/Siena3D
Go to the directory Siena3D and install the package with
pip install .
In addition, the user needs to manually install the Maoppy package with the commnand
pip install git+https://gitlab.lam.fr/lam-grd-public/maoppy.git@master
More information on the Maoppy package can be found here.
Basic usage
The Siena3D code can be run entirely from the command line. It is set up such that the files are placed in the "Input" and "Output" subdirectories of the working directory. A demo is provided in the example directory where also the parameter files together with a set of example data cube are provided. To test the installation and run the example, go to the example directory and execute:
python runall.py
We refer to the Siena3D user manual for more information on running Siena3D and the underlying algorithms.
Manual for more information on parameter file setup
More details on the underlying algorithms and principles of Siena3D can be found in the Siena3D User Manual. It provides an overview of the underlying algorithm, requirements for the input data as well as options and tips on how to setup the parameter files.
Owner
- Name: Nico Winkel
- Login: nicowinkel
- Kind: user
- Location: Heidelberg
- Company: Max-Planck-Institute for Astronomy
- Website: nicowinkel.com
- Repositories: 2
- Profile: https://github.com/nicowinkel
Postdoc at the Max-Planck-Institute for Astronomy, Heidelberg. I work on reducing and processing IFU data to study the AGN-host galaxy interaction
Citation (CITATION.cff)
cff-version: 1.2.0
title: Siena3D
version: 0.0.3
date-released: 2022-10-25
type: software
message: If you use this software, please cite as below.
date-released: 2022-08-29
url: 'https://github.com/nicowinkel/Siena3D'
doi: 10.5281/zenodo.7247953
authors:
- family-names: Winkel
given-names: Nico
email: winkel@mpia.de
affiliation: MPIA Heidelberg
orcid: 'https://orcid.org/0000-0001-9428-6238'
- family-names: Singha
given-names: Mainak
email: singham4@myumanitoba.ca
affiliation: University of Aanitoba
orcid: 'https://orcid.org/0000-0001-5687-1516'
GitHub Events
Total
Last Year
Committers
Last synced: about 3 years ago
All Time
- Total Commits: 55
- Total Committers: 2
- Avg Commits per committer: 27.5
- Development Distribution Score (DDS): 0.073
Top Committers
| Name | Commits | |
|---|---|---|
| Nico Winkel | w****l@m****e | 51 |
| Nico Winkel | 7****l@u****m | 4 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
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Packages
- Total packages: 1
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Total downloads:
- pypi 7 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 2
- Total maintainers: 1
pypi.org: siena3d
Spectroastrometric analysis tool for Ionised gas Emission in Nearby AGN
- Homepage: https://github.com/nicowinkel/Siena3D
- Documentation: https://siena3d.readthedocs.io/
- License: BSD-3-Clause
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Latest release: 0.0.3
published over 3 years ago
Rankings
Maintainers (1)
Dependencies
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
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