Artery.FE
Artery.FE: An implementation of the 1D blood flow equations in FEniCS - Published in JOSS (2018)
Science Score: 93.0%
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Found 7 DOI reference(s) in README and JOSS metadata -
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Published in Journal of Open Source Software
Repository
Implementation of the 1D blood flow equations using FEniCS
Basic Info
Statistics
- Stars: 22
- Watchers: 6
- Forks: 11
- Open Issues: 3
- Releases: 2
Metadata Files
README.md
artery.fe
Implementation of the 1D blood flow equations in FEniCS.
Documentation
The documentation was build using Sphinx autobuild and is hosted on Readthedocs https://bloodflow.readthedocs.io
Installation and dependencies
We recommend installing artery.fe using the provided Dockerfile. This ensures all dependencies are correctly installed. Build the Docker image by running
docker build --no-cache -t arteryfe:2017.2.0 .
To create and enter a Docker container run
docker run -ti -p 127.0.0.1:8000:8000 -v $(pwd):/home/fenics/shared -w /home/fenics/shared "arteryfe:2017.2.0"
Alternatively, artery.fe can be installed using the provided setup.py file by running
python3 setup.py install
This requires FEniCS version 2017.2.0 or higher.
Usage
The demo can be run using
python3 demo_arterybranch.py --cfg config/demo_arterybranch.cfg
Support
Active contributions and bug reports from users are welcome and encouraged. Should you experience any issues, please do not hesitate to contact @akdiem for advice.
License
artery.fe is free software made available under the BSD 3-clause License. For details see the LICENSE file.
Owner
- Name: KVSlab
- Login: KVSlab
- Kind: organization
- Repositories: 6
- Profile: https://github.com/KVSlab
JOSS Publication
Artery.FE: An implementation of the 1D blood flow equations in FEniCS
Authors
Department of Computational Physiology, Simula Research Laboratory
Department of Computational Physiology, Simula Research Laboratory
Department of Computational Physiology, Simula Research Laboratory
Editor
Tania Allard
Tags
python fenics blood flow pde finite elementGitHub Events
Total
- Watch event: 2
Last Year
- Watch event: 2
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 7
- Total pull requests: 35
- Average time to close issues: 15 days
- Average time to close pull requests: 32 minutes
- Total issue authors: 4
- Total pull request authors: 1
- Average comments per issue: 0.86
- Average comments per pull request: 0.0
- Merged pull requests: 35
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- alexdiem (2)
- hdillinger (2)
- jhill1 (2)
- Pahansith7 (1)
Pull Request Authors
- alexdiem (35)