qbatch - v2.3.1

What's Changed

• List comprehension to drop lines starting with comment by @gdevenyi in https://github.com/CoBrALab/qbatch/pull/221

Full Changelog: https://github.com/CoBrALab/qbatch/compare/v2.3...v2.3.1

- Python
Published by gdevenyi 7 months ago

qbatch -

• add --block for blocking job submission

- Python
Published by gdevenyi over 4 years ago

qbatch -

• fix python2 unicode support
• remove unneeded dependencies

- Python
Published by gdevenyi almost 6 years ago

qbatch - v2.2

• Fix log file naming for Slurm non-array jobs
• Add CITATION.cff file
• Update setup.py to fix description on PyPi
• Chunk size can now be unlimited, set size "0" to have unlimited chunk
• Fix workdir vs chdir for old vs new Slurm by using the short "-D" option instead
• Implement container mode for generating jobs to be parsed by external qbatch generated by internal qbatch within a container.

- Python
Published by gdevenyi almost 6 years ago

qbatch -

Bugfixes - fix SLURM job search returning wrong result when no jobs - fix UNICODE support in python2 for environment variables

- Python
Published by gdevenyi over 6 years ago

qbatch -

Bugfixes: - Accidental embedding of quotes into squeue listing broke SLURM dependencies

- Python
Published by gdevenyi over 6 years ago

qbatch -

A few bugs fixed after some testing of a new deployment c/o @egarza

• always check for parallel before submitting jobs
• explicitly embed the shell as part of the job commands os that posix_compliant job starting on Torque/PBS/SGE will use the right shell, in cases where the default shell is /bin/csh

- Python
Published by gdevenyi over 6 years ago

qbatch -

Fix dependency specification on SLURM

- Python
Published by gdevenyi over 6 years ago

qbatch -

Fix single job submission

- Python
Published by gdevenyi almost 7 years ago

qbatch - Niagara

• Added proper setup.py for dependencies
• Threads per command in local run
• Fix slurm logfile naming based on single or array jobs
• Move binary checks to presubmission so help works
• UTF-8 and python3 encoding fixes

- Python
Published by gdevenyi about 7 years ago

qbatch - 2.0.2 release

PyPi packaging changed and doesn't automatically include VERSION anymore.

Just code the version into setup.py instead of writing a full MANIFEST.in file

- Python
Published by gdevenyi almost 8 years ago

qbatch - 2.0.1 release

Fix broken indenting in job files Cleanup some error checking

- Python
Published by gdevenyi almost 8 years ago

qbatch - 2.0 release

Lots of big changes in this release: - Slurm support - Python API - lots of small feature additions and tweaks

- Python
Published by gdevenyi almost 8 years ago

qbatch - 1.0.1 release

This release exists only to fix the python wheel distribution on pypi. :-)

- Python
Published by pipitone almost 10 years ago

qbatch - 1.0 release

- Python
Published by pipitone almost 10 years ago

qbatch - 1.0rc4

1.0 release candidate 4

- Python
Published by gdevenyi almost 10 years ago

qbatch - 1.0rc3

1.0 release candidate 3

- Python
Published by gdevenyi almost 10 years ago