Releases | Open Source Science

https://github.com/geoscienceaustralia/dea-sandbox - 2.1.0

Major upgrade to DEA Sandbox environment to include new Python packages and software. Several new packages have also been added, including gcfs (for accessing data on Google Cloud), xarray-spatial (for performing spatial analysis with xarray), and pyspark (unified analytics engine for large-scale data processing).

Most significantly, this includes an upgrade to JupyterLab 4.0, which will update the main Sandbox user interface. Users may encounter caching issues when logging in to the Sandbox for the first time after this upgrade; please empty cache and hard reload your Sandbox’s browser tab if problems occur. Please note that some existing Sandbox functionality (code snippet tool and resource monitor graphs) are not currently supported by JupyterLab 4.0 and will be restored as soon as they are available.

See the full list of Python package versions available in the new Sandbox environment.

What's Changed

Fix new user role setup on ARE by @Ariana-B in https://github.com/GeoscienceAustralia/dea-sandbox/pull/284
Update Sandbox image packages by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/286
Add minimum package versions for ESRI/GDAL nodata fix by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/288
Add comment bot to report Docker image package versions by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/290
upgrade to jupyterlab > 4 by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/291

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.10...2.1.0

- Python
Published by robbibt almost 2 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.10

What's Changed

This is a standard/regular update to keep the DEA Sandbox environment up to date with important new functionality required for our internal users and our internal product development. The release includes the latest versions of many important Python packages, particularly:

datacube==1.8.18 - latest version includes better compatibility for odc-geo (important for future transition to datacube 1.9)
odc-geo==0.4.3 - Important updates to interactive plotting functionality and reprojection
dea-tools==0.3.2 - New functionality (xr_interpolate interpolation function) and bug fixes
eodatasets==0.30.4 - Latest updates include better nodata support and new DEA Intertidal properties

PRs:

Make everything compatible with jupyterlab=3.6.x by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/280
fix jupytext by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/281
Update DEA Sandbox image by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/282
Add s5cmd to Sandbox image by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/283

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.9...2.0.10

- Python
Published by robbibt over 2 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.9

What's Changed

Update odc-geo to resolve projection bug by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/277

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.8...2.0.9

- Python
Published by emmaai over 2 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.8

What's Changed

update odc core version and remove install dea-tools from local folder by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/274

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.7...2.0.8

- Python
Published by emmaai over 2 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.7

What's Changed

Transfer nci_environment from digitalearthau by @Ariana-B in https://github.com/GeoscienceAustralia/dea-sandbox/pull/260
Dsg docs by @dunkgray in https://github.com/GeoscienceAustralia/dea-sandbox/pull/262
DSNS-201: Added additional documentation to assist with running the tests in nci by @gordonyeong in https://github.com/GeoscienceAustralia/dea-sandbox/pull/263
DSNS-201: Updated the readme as there's a more accurate place to put the instructions on running tests in by @gordonyeong in https://github.com/GeoscienceAustralia/dea-sandbox/pull/264
Remove pyTMD<2.0 restriction, add spyndex by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/261
remove gdal pin by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/265
Upgrade python by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/268
update base images by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/269
free space in workflow by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/270
Update ensure user script by @Ariana-B in https://github.com/GeoscienceAustralia/dea-sandbox/pull/272
Upgrade to awscliv2 by @matt-fry-ga in https://github.com/GeoscienceAustralia/dea-sandbox/pull/271
Add DEA Tools and minimum pyTMD version by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/273

New Contributors

@Ariana-B made their first contribution in https://github.com/GeoscienceAustralia/dea-sandbox/pull/260
@dunkgray made their first contribution in https://github.com/GeoscienceAustralia/dea-sandbox/pull/262
@gordonyeong made their first contribution in https://github.com/GeoscienceAustralia/dea-sandbox/pull/263
@matt-fry-ga made their first contribution in https://github.com/GeoscienceAustralia/dea-sandbox/pull/271

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.6...2.0.7

- Python
Published by emmaai over 2 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.6

What's Changed

pin tf=2.7 and add planetary package by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/259

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.4...2.0.6

- Python
Published by emmaai about 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.5

Upgrade odc versions

- Python
Published by emmaai about 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.4

What's Changed

Update readme by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/256
Pin scipy to >=1.10.1 by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/257
free space in github workflow by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/258

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.3...2.0.4

- Python
Published by emmaai about 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.3

What's Changed

correct the ref and add stable tag by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/252
correct shell script typos by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/253
fix the shell syntax by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/254

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.2...2.0.3

- Python
Published by emmaai over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.2

What's Changed

Update integration test by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/249
fix typos in yaml by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/250
Fix image publishing by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/251

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/2.0.1...2.0.2

``` Package Version Editable project location

absl-py 1.4.0 access 1.1.8 affine 2.4.0 aiobotocore 2.4.2 aiohttp 3.8.4 aioitertools 0.11.0 aiosignal 1.3.1 alabaster 0.7.13 alembic 1.9.3 amply 0.1.5 anyio 3.6.2 appdirs 1.4.4 argon2-cffi 21.3.0 argon2-cffi-bindings 21.2.0 arrow 1.2.3 asciitree 0.3.3 astropy 5.2.1 asttokens 2.2.1 astunparse 1.6.3 async-generator 1.10 async-timeout 4.0.2 atomicwrites 1.4.1 attrs 22.2.0 autopep8 2.0.1 aws-requests-auth 0.4.2 awscli 1.25.60 Babel 2.11.0 backcall 0.2.0 backports.functools-lru-cache 1.6.4 backports.zoneinfo 0.2.1 beautifulsoup4 4.11.2 black 23.1.0 bleach 6.0.0 blinker 1.5 bokeh 2.4.3 boltons 21.0.0 boto3 1.24.59 botocore 1.27.59 Bottleneck 1.3.6 branca 0.6.0 brotlipy 0.7.0 cached-property 1.5.2 cachetools 5.3.0 Cartopy 0.21.1 cattrs 22.2.0 certifi 2022.12.7 certipy 0.1.3 cffi 1.15.1 cftime 1.6.2 cgal 5.5.2.post202303131425 charset-normalizer 2.1.1 ciso8601 2.3.0 click 8.1.3 click-plugins 1.1.1 cligj 0.7.2 cloudpickle 2.2.1 cmocean 2.0 cognitojwt 1.4.1 colorama 0.4.4 colorcet 3.0.1 colorspacious 1.1.2 colour 0.1.5 comm 0.1.2 contextily 1.3.0 contourpy 1.0.7 coverage 7.1.0 cryptography 39.0.0 cycler 0.11.0 Cython 0.29.33 cytoolz 0.12.0 dask 2023.2.0 dask-gateway 2023.1.1 dask-glm 0.2.0 dask-image 2022.9.0 dask-labextension 6.0.0 dask-ml 2022.5.27 datacube 1.8.12 datacube-ows 1.8.33 datacube-stats 1.0.2 datashader 0.14.4 datashape 0.5.4 debugpy 1.6.6 decorator 5.1.1 deepdiff 6.2.3 defusedxml 0.7.1 deprecation 2.1.0 descartes 1.1.0 digitalearthau 20220517 dill 0.3.6 distributed 2023.2.0 docutils 0.16 ecdsa 0.18.0 entrypoints 0.4 eodatasets3 0.29.6 esda 2.4.3 exceptiongroup 1.1.0 executing 1.2.0 fasteners 0.17.3 fastjsonschema 2.16.2 fc 1.3.9 ffmpeg-python 0.2.0 Fiona 1.8.22 Flask 2.2.2 flask-babel 3.0.1 Flask-Log-Request-ID 0.10.1 flatbuffers 23.1.21 flitcore 3.8.0 folium 0.14.0 fonttools 4.38.0 fqdn 1.5.1 frozenlist 1.3.3 fsspec 2023.1.0 future 0.18.3 gast 0.4.0 GDAL 3.6.1 GeoAlchemy2 0.13.1 geographiclib 1.52 geohash2 1.1 geojson 2.5.0 geopandas 0.12.2 geopy 2.3.0 geoviews 1.9.6 giddy 2.3.3 gitdb 4.0.10 GitPython 3.1.30 gmpy2 2.1.2 google-auth 2.16.0 google-auth-oauthlib 0.4.6 google-pasta 0.2.0 greenlet 2.0.2 grpcio 1.51.1 h5py 3.8.0 hdmedians 0.14.2 hdstats 0.1.8.post1 HeapDict 1.0.1 holoviews 1.15.4 idna 3.4 imagecodecs 2022.12.24 imageio 2.25.1 importlib-metadata 6.0.0 importlib-resources 5.10.2 inequality 1.0.0 iniconfig 2.0.0 ipycanvas 0.13.1 ipycytoscape 1.3.3 ipyevents 2.0.1 ipyfilechooser 0.6.0 ipykernel 6.21.2 ipyleaflet 0.17.2 ipympl 0.9.2 ipython 8.10.0 ipython-genutils 0.2.0 ipywidgets 8.0.4 iso8601 1.1.0 isoduration 20.11.0 isort 5.12.0 itsdangerous 2.1.2 jedi 0.18.2 Jinja2 3.1.2 jmespath 1.0.1 joblib 1.2.0 Js2Py 0.74 json5 0.9.5 jsonlines 1.2.0 jsonpointer 2.3 jsonschema 4.17.3 jupyter 1.0.0 jupyter-bokeh 3.0.5 jupyterclient 8.0.2 jupyter-console 6.5.1 jupyter-contrib-core 0.4.2 jupyter-contrib-nbextensions 0.7.0 jupytercore 5.2.0 jupyter-events 0.6.3 jupyter-highlight-selected-word 0.2.0 jupyter-nbextensions-configurator 0.6.1 jupyter-resource-usage 0.7.1 jupyterserver 2.2.1 jupyter-server-mathjax 0.2.6 jupyter-server-proxy 3.2.2 jupyterserverterminals 0.4.4 jupyter-telemetry 0.1.0 jupyter-ui-poll 0.2.2 jupyterhub 3.1.1 jupyterlab 3.5.3 jupyterlab-code-formatter 1.5.3 jupyterlab-code-snippets 2.1.0 jupyterlab-geojson 3.3.1 jupyterlab-git 0.41.0 jupyterlab-iframe 0.4.4 jupyterlab-language-pack-fr-FR 3.5.post2 jupyterlab-logout 0.5.0 jupyterlab-pygments 0.2.2 jupyterlabserver 2.19.0 jupyterlab-spellchecker 0.7.2 jupyterlab-system-monitor 0.8.0 jupyterlab-topbar 0.6.1 jupyterlab-widgets 3.0.5 jupytext 1.14.4 keras 2.11.0 Keras-Preprocessing 1.1.2 kiwisolver 1.4.4 lark 1.1.5 libpysal 4.7.0 line-profiler 4.0.3 llvmlite 0.39.1 lmdb 1.4.0 locket 1.0.0 lxml 4.9.2 lz4 4.3.2 Mako 1.2.4 mapclassify 2.5.0 Markdown 3.4.1 markdown-it-py 2.1.0 MarkupSafe 2.1.2 matplotlib 3.7.0 matplotlib-inline 0.1.6 mdit-py-plugins 0.3.3 mdurl 0.1.0 mercantile 1.2.1 mgwr 2.1.2 mistune 2.0.5 momepy 0.5.4 morecantile 3.2.5 mpmath 1.2.1 msgpack 1.0.4 multidict 6.0.4 multipledispatch 0.6.0 multiprocess 0.70.14 munch 2.5.0 munkres 1.1.4 mypy 1.0.0 mypy-extensions 1.0.0 nbclassic 0.5.1 nbclient 0.7.2 nbconvert 7.2.9 nbdime 3.1.1 nbformat 5.7.3 nbgitpuller 1.1.1 nbval 0.9.6 nest-asyncio 1.5.6 netCDF4 1.6.2 networkx 3.0 notebook 6.5.2 notebookshim 0.2.2 numba 0.56.4 numcodecs 0.11.0 numexpr 2.8.3 numpy 1.23.5 oauthlib 3.2.2 odc-algo 0.2.3 odc-cloud 0.2.3 odc-dscache 0.2.2 odc-geo 0.3.3 odc-io 0.2.1 odc-stac 0.3.5 odc-stats 1.0.33 odc-ui 0.2.1.dev3668 opencv-contrib-python-headless 4.7.0.72 opencv-python-headless 4.7.0.72 opt-einsum 3.3.0 ordered-set 4.1.0 orjson 3.8.5 osmnet 0.1.6 otps 0.3.2 OWSLib 0.27.2 packaging 23.0 pamela 1.0.0 pandana 0.6.1 pandas 1.5.3 pandocfilters 1.5.0 panel 0.14.3 param 1.12.3 parso 0.8.3 partd 1.3.0 pathos 0.3.0 pathspec 0.11.0 patsy 0.5.3 pexpect 4.8.0 pickleshare 0.7.5 Pillow 9.4.0 PIMS 0.6.1 pip 23.0 pkgutilresolvename 1.3.10 platformdirs 3.0.0 plotly 5.13.0 pluggy 1.0.0 ply 3.11 pointpats 2.2.0 pooch 1.6.0 pox 0.3.2 ppft 1.7.6.6 prometheus-client 0.16.0 prometheus-flask-exporter 0.22.3 prompt-toolkit 3.0.36 protobuf 4.21.12 psutil 5.9.4 psycopg2 2.9.3 ptyprocess 0.7.0 PuLP 2.7.0 pure-eval 0.2.2 pyasn1 0.4.8 pyasn1-modules 0.2.7 pycodestyle 2.10.0 pycparser 2.21 pyct 0.4.6 pycurl 7.45.1 pydantic 1.10.4 pydash 6.0.0 pydotplus 2.0.2 pyerfa 2.0.0.1 pygeos 0.14 Pygments 2.14.0 pyjsparser 2.7.1 PyJWT 2.6.0 pyOpenSSL 23.0.0 pyows 0.2.7 pyparsing 2.4.7 pyproj 3.4.1 PyQt5 5.15.7 PyQt5-sip 12.11.0 pyrsistent 0.19.3 pysal 23.1 pysheds 0.3.3 pyshp 2.3.1 PySocks 1.7.1 pystac 1.6.1 pystac-client 0.6.0 pytest 7.2.1 python-dateutil 2.8.2 python-geohash 0.8.5 python-jose 3.3.0 python-json-logger 2.0.6 python-rapidjson 1.9 python-slugify 8.0.0 pyTMD 1.1.3 pytz 2022.7.1 pytz-deprecation-shim 0.1.0.post0 pyu2f 0.1.5 pyviz-comms 2.2.1 PyWavelets 1.4.1 PyYAML 5.4.1 pyzmq 25.0.0 qtconsole 5.4.0 QtPy 2.3.0 quantecon 0.5.3 quilt3 5.0.0 rasterio 1.3.4 rasterstats 0.17.1 regex 2022.10.31 requests 2.28.2 requests-futures 1.0.0 requests-oauthlib 1.3.1 rfc3339-validator 0.1.4 rfc3986-validator 0.1.1 rio-cogeo 3.5.0 rios 1.4.13 rioxarray 0.13.3 rsa 4.7.2 rsgislib 4.1.95 Rtree 1.0.1 ruamel.yaml 0.17.21 ruamel.yaml.clib 0.2.7 rvlib 0.0.6 s2cloudmask 0.1 s3fs 2023.1.0 s3transfer 0.6.0 scikit-image 0.19.3 scikit-learn 1.2.1 scipy 1.10.0 seaborn 0.12.2 segregation 2.3.1 Send2Trash 1.8.0 sentry-sdk 1.15.0 setuptools 67.3.1 setuptools-scm 7.1.0 shapely 2.0.1 sidecar 0.5.2 simpervisor 0.4 simplejson 3.18.3 sip 6.7.7 six 1.16.0 slicerator 1.1.0 smmap 3.0.5 sniffio 1.3.0 snuggs 1.4.7 sortedcontainers 2.4.0 soupsieve 2.3.2.post1 spaghetti 1.7.2 spectate 1.0.1 spglm 1.0.8 spint 1.0.7 splot 1.1.5.post1 spopt 0.5.0 spreg 1.3.0 spvcm 0.3.0 SQLAlchemy 1.4.46 stack-data 0.6.2 statsmodels 0.13.5 structlog 22.1.0 sympy 1.11.1 tables 3.7.0 tblib 1.7.0 tenacity 8.2.1 tensorboard 2.11.2 tensorboard-data-server 0.6.1 tensorboard-plugin-wit 1.8.1 tensorflow 2.11.0 tensorflow-estimator 2.11.0 termcolor 2.2.0 terminado 0.17.1 text-unidecode 1.3 threadpoolctl 3.1.0 thredds-crawler 1.5.4 tifffile 2022.10.10 timezonefinderL 4.0.2 tinycss2 1.2.1 tobler 0.9.0 toml 0.10.2 tomli 2.0.1 toolz 0.12.0 tornado 6.2 tornado-proxy-handlers 0.0.5 tqdm 4.64.1 traitlets 5.9.0 traittypes 0.2.1 typing_extensions 4.4.0 tzdata 2022.7 tzlocal 4.2 unicodedata2 15.0.0 Unidecode 1.3.6 urbanaccess 0.2.2 uri-template 1.2.0 urllib3 1.26.14 urlpath 1.2.0 voluptuous 0.13.1 wcwidth 0.2.6 webcolors 1.12 webencodings 0.5.1 websocket-client 1.5.1 Werkzeug 2.2.2 wheel 0.38.4 widgetsnbextension 4.0.5 wrapt 1.14.1 xarray 2023.1.0 xgboost 1.7.1 xyzservices 2022.9.0 yapf 0.32.0 yarl 1.8.2 zarr 2.13.6 zict 2.2.0 zipp 3.13.0 zstandard 0.19.0 ```

- Python
Published by emmaai over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.1

Minor release to replace rsync with cp in sync_repo.

``` Package Version Editable project location

absl-py 1.4.0 access 1.1.8 affine 2.4.0 aiobotocore 2.4.2 aiohttp 3.8.4 aioitertools 0.11.0 aiosignal 1.3.1 alabaster 0.7.13 alembic 1.9.3 amply 0.1.5 anyio 3.6.2 appdirs 1.4.4 argon2-cffi 21.3.0 argon2-cffi-bindings 21.2.0 arrow 1.2.3 asciitree 0.3.3 astropy 5.2.1 asttokens 2.2.1 astunparse 1.6.3 async-generator 1.10 async-timeout 4.0.2 atomicwrites 1.4.1 attrs 22.2.0 autopep8 2.0.1 aws-requests-auth 0.4.2 awscli 1.25.60 Babel 2.11.0 backcall 0.2.0 backports.functools-lru-cache 1.6.4 backports.zoneinfo 0.2.1 beautifulsoup4 4.11.2 black 23.1.0 bleach 6.0.0 blinker 1.5 bokeh 2.4.3 boltons 21.0.0 boto3 1.24.59 botocore 1.27.59 Bottleneck 1.3.6 branca 0.6.0 brotlipy 0.7.0 cached-property 1.5.2 cachetools 5.3.0 Cartopy 0.21.1 cattrs 22.2.0 certifi 2022.12.7 certipy 0.1.3 cffi 1.15.1 cftime 1.6.2 cgal 5.5.1.post202210191030 charset-normalizer 2.1.1 ciso8601 2.3.0 click 8.1.3 click-plugins 1.1.1 cligj 0.7.2 cloudpickle 2.2.1 cmocean 2.0 cognitojwt 1.4.1 colorama 0.4.4 colorcet 3.0.1 colorspacious 1.1.2 colour 0.1.5 comm 0.1.2 contextily 1.3.0 contourpy 1.0.7 coverage 7.1.0 cryptography 39.0.0 cycler 0.11.0 Cython 0.29.33 cytoolz 0.12.0 dask 2023.2.0 dask-gateway 2023.1.1 dask-glm 0.2.0 dask-image 2022.9.0 dask-labextension 6.0.0 dask-ml 2022.5.27 datacube 1.8.11 datacube-ows 1.8.33 datacube-stats 1.0.2 datashader 0.14.4 datashape 0.5.4 dea-tools 0.1.dev1 /home/jovyan/Tools debugpy 1.6.6 decorator 5.1.1 deepdiff 6.2.3 defusedxml 0.7.1 deprecation 2.1.0 descartes 1.1.0 digitalearthau 20220517 dill 0.3.6 distributed 2023.2.0 docutils 0.16 ecdsa 0.18.0 entrypoints 0.4 eodatasets3 0.29.5 esda 2.4.3 exceptiongroup 1.1.0 executing 1.2.0 fasteners 0.17.3 fastjsonschema 2.16.2 fc 1.3.9 ffmpeg-python 0.2.0 Fiona 1.8.22 Flask 2.2.2 flask-babel 3.0.1 Flask-Log-Request-ID 0.10.1 flatbuffers 23.1.21 flitcore 3.8.0 folium 0.14.0 fonttools 4.38.0 fqdn 1.5.1 frozenlist 1.3.3 fsspec 2023.1.0 future 0.18.3 gast 0.4.0 GDAL 3.6.1 GeoAlchemy2 0.13.1 geographiclib 1.52 geohash2 1.1 geojson 2.5.0 geopandas 0.12.2 geopy 2.3.0 geoviews 1.9.6 giddy 2.3.3 gitdb 4.0.10 GitPython 3.1.30 gmpy2 2.1.2 google-auth 2.16.0 google-auth-oauthlib 0.4.6 google-pasta 0.2.0 greenlet 2.0.2 grpcio 1.51.1 h5py 3.8.0 hdmedians 0.14.2 hdstats 0.1.8.post1 HeapDict 1.0.1 holoviews 1.15.4 idna 3.4 imagecodecs 2022.12.24 imageio 2.25.1 importlib-metadata 6.0.0 importlib-resources 5.10.2 inequality 1.0.0 iniconfig 2.0.0 ipycanvas 0.13.1 ipycytoscape 1.3.3 ipyevents 2.0.1 ipyfilechooser 0.6.0 ipykernel 6.21.2 ipyleaflet 0.17.2 ipympl 0.9.2 ipython 8.10.0 ipython-genutils 0.2.0 ipywidgets 8.0.4 iso8601 1.1.0 isoduration 20.11.0 isort 5.12.0 itsdangerous 2.1.2 jedi 0.18.2 Jinja2 3.1.2 jmespath 1.0.1 joblib 1.2.0 Js2Py 0.74 json5 0.9.5 jsonlines 1.2.0 jsonpointer 2.3 jsonschema 4.17.3 jupyter 1.0.0 jupyter-bokeh 3.0.5 jupyterclient 8.0.2 jupyter-console 6.5.1 jupyter-contrib-core 0.4.2 jupyter-contrib-nbextensions 0.7.0 jupytercore 5.2.0 jupyter-events 0.6.3 jupyter-highlight-selected-word 0.2.0 jupyter-nbextensions-configurator 0.6.1 jupyter-resource-usage 0.7.1 jupyterserver 2.2.1 jupyter-server-mathjax 0.2.6 jupyter-server-proxy 3.2.2 jupyterserverterminals 0.4.4 jupyter-telemetry 0.1.0 jupyter-ui-poll 0.2.2 jupyterhub 3.1.1 jupyterlab 3.5.3 jupyterlab-code-formatter 1.5.3 jupyterlab-code-snippets 2.1.0 jupyterlab-geojson 3.3.1 jupyterlab-git 0.41.0 jupyterlab-iframe 0.4.4 jupyterlab-language-pack-fr-FR 3.5.post2 jupyterlab-logout 0.5.0 jupyterlab-pygments 0.2.2 jupyterlabserver 2.19.0 jupyterlab-spellchecker 0.7.2 jupyterlab-system-monitor 0.8.0 jupyterlab-topbar 0.6.1 jupyterlab-widgets 3.0.5 jupytext 1.14.4 keras 2.11.0 Keras-Preprocessing 1.1.2 kiwisolver 1.4.4 lark 1.1.5 libpysal 4.7.0 line-profiler 4.0.2 llvmlite 0.39.1 lmdb 1.4.0 locket 1.0.0 lxml 4.9.2 lz4 4.3.2 Mako 1.2.4 mapclassify 2.5.0 Markdown 3.4.1 markdown-it-py 2.1.0 MarkupSafe 2.1.2 matplotlib 3.7.0 matplotlib-inline 0.1.6 mdit-py-plugins 0.3.3 mdurl 0.1.0 mercantile 1.2.1 mgwr 2.1.2 mistune 2.0.5 momepy 0.5.4 morecantile 3.2.5 mpmath 1.2.1 msgpack 1.0.4 multidict 6.0.4 multipledispatch 0.6.0 multiprocess 0.70.14 munch 2.5.0 munkres 1.1.4 mypy 1.0.0 mypy-extensions 1.0.0 nbclassic 0.5.1 nbclient 0.7.2 nbconvert 7.2.9 nbdime 3.1.1 nbformat 5.7.3 nbgitpuller 1.1.1 nbval 0.9.6 nest-asyncio 1.5.6 netCDF4 1.6.2 networkx 3.0 notebook 6.5.2 notebookshim 0.2.2 numba 0.56.4 numcodecs 0.11.0 numexpr 2.8.3 numpy 1.23.5 oauthlib 3.2.2 odc-algo 0.2.3 odc-cloud 0.2.3 odc-dscache 0.2.2 odc-geo 0.3.3 odc-io 0.2.1 odc-stac 0.3.5 odc-stats 1.0.32 odc-ui 0.2.1.dev3630 opencv-contrib-python-headless 4.7.0.68 opencv-python-headless 4.7.0.68 opt-einsum 3.3.0 ordered-set 4.1.0 orjson 3.8.5 osmnet 0.1.6 otps 0.3.2 OWSLib 0.27.2 packaging 23.0 pamela 1.0.0 pandana 0.6.1 pandas 1.5.3 pandocfilters 1.5.0 panel 0.14.3 param 1.12.3 parso 0.8.3 partd 1.3.0 pathos 0.3.0 pathspec 0.11.0 patsy 0.5.3 pexpect 4.8.0 pickleshare 0.7.5 Pillow 9.4.0 PIMS 0.6.1 pip 23.0 pkgutilresolvename 1.3.10 platformdirs 3.0.0 plotly 5.13.0 pluggy 1.0.0 ply 3.11 pointpats 2.2.0 pooch 1.6.0 pox 0.3.2 ppft 1.7.6.6 prometheus-client 0.16.0 prometheus-flask-exporter 0.21.0 prompt-toolkit 3.0.36 protobuf 4.21.12 psutil 5.9.4 psycopg2 2.9.3 ptyprocess 0.7.0 PuLP 2.7.0 pure-eval 0.2.2 pyasn1 0.4.8 pyasn1-modules 0.2.7 pycodestyle 2.10.0 pycparser 2.21 pyct 0.4.6 pycurl 7.45.1 pydantic 1.10.4 pydash 6.0.0 pydotplus 2.0.2 pyerfa 2.0.0.1 pygeos 0.14 Pygments 2.14.0 pyjsparser 2.7.1 PyJWT 2.6.0 pyOpenSSL 23.0.0 pyows 0.2.7 pyparsing 2.4.7 pyproj 3.4.1 PyQt5 5.15.7 PyQt5-sip 12.11.0 pyrsistent 0.19.3 pysal 23.1 pysheds 0.3.3 pyshp 2.3.1 PySocks 1.7.1 pystac 1.6.1 pystac-client 0.6.0 pytest 7.2.1 python-dateutil 2.8.2 python-geohash 0.8.5 python-jose 3.3.0 python-json-logger 2.0.6 python-rapidjson 1.9 python-slugify 8.0.0 pyTMD 1.1.3 pytz 2022.7.1 pytz-deprecation-shim 0.1.0.post0 pyu2f 0.1.5 pyviz-comms 2.2.1 PyWavelets 1.4.1 PyYAML 5.4.1 pyzmq 25.0.0 qtconsole 5.4.0 QtPy 2.3.0 quantecon 0.5.3 quilt3 5.0.0 rasterio 1.3.4 rasterstats 0.17.1 regex 2022.10.31 requests 2.28.2 requests-futures 1.0.0 requests-oauthlib 1.3.1 rfc3339-validator 0.1.4 rfc3986-validator 0.1.1 rio-cogeo 3.5.0 rios 1.4.13 rioxarray 0.13.3 rsa 4.7.2 rsgislib 4.1.95 Rtree 1.0.1 ruamel.yaml 0.17.21 ruamel.yaml.clib 0.2.7 rvlib 0.0.6 s2cloudmask 0.1 s3fs 2023.1.0 s3transfer 0.6.0 scikit-image 0.19.3 scikit-learn 1.2.1 scipy 1.10.0 seaborn 0.12.2 segregation 2.3.1 Send2Trash 1.8.0 sentry-sdk 1.15.0 setuptools 67.3.1 setuptools-scm 7.1.0 shapely 2.0.1 sidecar 0.5.2 simpervisor 0.4 simplejson 3.18.3 sip 6.7.7 six 1.16.0 slicerator 1.1.0 smmap 3.0.5 sniffio 1.3.0 snuggs 1.4.7 sortedcontainers 2.4.0 soupsieve 2.3.2.post1 spaghetti 1.7.2 spectate 1.0.1 spglm 1.0.8 spint 1.0.7 splot 1.1.5.post1 spopt 0.5.0 spreg 1.3.0 spvcm 0.3.0 SQLAlchemy 1.4.46 stack-data 0.6.2 statsmodels 0.13.5 structlog 22.1.0 sympy 1.11.1 tables 3.7.0 tblib 1.7.0 tenacity 8.2.1 tensorboard 2.11.2 tensorboard-data-server 0.6.1 tensorboard-plugin-wit 1.8.1 tensorflow 2.11.0 tensorflow-estimator 2.11.0 termcolor 2.2.0 terminado 0.17.1 text-unidecode 1.3 threadpoolctl 3.1.0 thredds-crawler 1.5.4 tifffile 2022.10.10 timezonefinderL 4.0.2 tinycss2 1.2.1 tobler 0.9.0 toml 0.10.2 tomli 2.0.1 toolz 0.12.0 tornado 6.2 tornado-proxy-handlers 0.0.5 tqdm 4.64.1 traitlets 5.9.0 traittypes 0.2.1 typing_extensions 4.4.0 tzdata 2022.7 tzlocal 4.2 unicodedata2 15.0.0 Unidecode 1.3.6 urbanaccess 0.2.2 uri-template 1.2.0 urllib3 1.26.14 urlpath 1.2.0 voluptuous 0.13.1 wcwidth 0.2.6 webcolors 1.12 webencodings 0.5.1 websocket-client 1.5.1 Werkzeug 2.2.2 wheel 0.38.4 widgetsnbextension 4.0.5 wrapt 1.14.1 xarray 2023.1.0 xgboost 1.7.1 xyzservices 2022.9.0 yapf 0.32.0 yarl 1.8.2 zarr 2.13.6 zict 2.2.0 zipp 3.13.0 zstandard 0.19.0 ```

- Python
Published by stacyhorton over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 2.0.0

What's Changed

We should have picked a big version number when we switched to using conda to build the image. No time like the present.

Pin PyTMD to avoid deprecation warnings by @robbibt in https://github.com/GeoscienceAustralia/dea-sandbox/pull/245
upgrade dependencies and revolve issues by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/246

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/1.0.14...2.0.0

- Python
Published by omad over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 1.0.14

Fixes an incompatibility with ipywidgets

``` Package Version Editable project location

absl-py 1.4.0 access 1.1.8 affine 2.3.1 aiobotocore 2.4.2 aiohttp 3.8.3 aioitertools 0.11.0 aiosignal 1.3.1 alabaster 0.7.13 alembic 1.9.1 amply 0.1.5 anyio 3.6.2 appdirs 1.4.4 argon2-cffi 21.3.0 argon2-cffi-bindings 21.2.0 asciitree 0.3.3 astropy 5.2.1 asttokens 2.2.1 astunparse 1.6.3 async-generator 1.10 async-timeout 4.0.2 atomicwrites 1.4.1 attrs 22.2.0 autopep8 2.0.1 aws-requests-auth 0.4.2 awscli 1.25.60 Babel 2.11.0 backcall 0.2.0 backports.functools-lru-cache 1.6.4 backports.zoneinfo 0.2.1 beautifulsoup4 4.11.1 black 22.12.0 bleach 5.0.1 blinker 1.5 bokeh 2.4.3 boltons 21.0.0 boto3 1.24.59 botocore 1.27.59 Bottleneck 1.3.5 branca 0.6.0 brotlipy 0.7.0 cached-property 1.5.2 cachetools 5.2.1 Cartopy 0.21.0 cattrs 22.2.0 certifi 2022.12.7 certipy 0.1.3 cffi 1.15.1 cftime 1.6.2 charset-normalizer 2.1.1 ciso8601 2.3.0 click 8.1.3 click-plugins 1.1.1 cligj 0.7.2 cloudpickle 2.2.0 cmocean 2.0 cognitojwt 1.4.1 colorama 0.4.4 colorcet 3.0.1 colorspacious 1.1.2 colour 0.1.5 comm 0.1.2 contextily 1.2.0 contourpy 1.0.7 coverage 7.0.5 cryptography 39.0.0 cycler 0.11.0 Cython 0.29.33 cytoolz 0.12.0 dask 2023.1.0 dask-gateway 2023.1.1 dask-glm 0.2.0 dask-image 2022.9.0 dask-labextension 6.0.0 dask-ml 2022.5.27 datacube 1.8.9 datacube-ows 1.8.33 datacube-stats 1.0.2 datashader 0.14.3 datashape 0.5.4 dea-tools 0.1.dev1 /home/jovyan/Tools debugpy 1.6.5 decorator 5.1.1 deepdiff 6.2.3 defusedxml 0.7.1 deprecation 2.1.0 descartes 1.1.0 digitalearthau 20220517 dill 0.3.6 distributed 2023.1.0 docutils 0.16 ecdsa 0.18.0 entrypoints 0.4 eodatasets3 0.29.5 esda 2.4.3 exceptiongroup 1.1.0 executing 1.2.0 fasteners 0.17.3 fastjsonschema 2.16.2 fc 1.3.9 ffmpeg-python 0.2.0 Fiona 1.8.21 Flask 2.2.2 Flask-Babel 2.0.0 Flask-Log-Request-ID 0.10.1 flatbuffers 23.1.4 flitcore 3.8.0 folium 0.14.0 fonttools 4.38.0 frozenlist 1.3.3 fsspec 2022.11.0 future 0.18.3 gast 0.4.0 GDAL 3.5.1 GeoAlchemy2 0.12.5 geographiclib 1.52 geohash2 1.1 geojson 2.5.0 geopandas 0.12.2 geopy 2.3.0 geoviews 1.9.6 giddy 2.3.3 gitdb 4.0.10 GitPython 3.1.30 gmpy2 2.1.2 google-auth 2.16.0 google-auth-oauthlib 0.4.6 google-pasta 0.2.0 greenlet 2.0.1 grpcio 1.51.1 h5py 3.7.0 hdmedians 0.14.2 hdstats 0.1.8.post1 HeapDict 1.0.1 holoviews 1.15.4 idna 3.4 imagecodecs 2022.9.26 imageio 2.24.0 importlib-metadata 6.0.0 importlib-resources 5.10.2 inequality 1.0.0 iniconfig 2.0.0 ipycanvas 0.13.1 ipyevents 2.0.1 ipyfilechooser 0.6.0 ipykernel 6.20.2 ipyleaflet 0.17.2 ipympl 0.9.2 ipython 8.8.0 ipython-genutils 0.2.0 ipywidgets 7.7.2 iso8601 1.1.0 isort 5.11.4 itsdangerous 2.1.2 jedi 0.18.2 Jinja2 3.1.2 jmespath 1.0.1 joblib 1.2.0 Js2Py 0.74 json5 0.9.5 jsonlines 1.2.0 jsonschema 4.17.3 jupyter 1.0.0 jupyter-bokeh 3.0.5 jupyterclient 7.4.9 jupyter-console 6.4.4 jupyter-contrib-core 0.4.2 jupyter-contrib-nbextensions 0.7.0 jupytercore 5.1.3 jupyter-highlight-selected-word 0.2.0 jupyter-nbextensions-configurator 0.6.1 jupyter-resource-usage 0.7.0 jupyter-server 1.23.5 jupyter-server-mathjax 0.2.6 jupyter-server-proxy 3.2.2 jupyter-telemetry 0.1.0 jupyter-ui-poll 0.2.2 jupyterhub 3.1.0 jupyterlab 3.5.2 jupyterlab-code-formatter 1.5.3 jupyterlab-code-snippets 2.1.0 jupyterlab-geojson 3.3.1 jupyterlab-git 0.41.0 jupyterlab-iframe 0.4.4 jupyterlab-language-pack-fr-FR 3.5.post2 jupyterlab-logout 0.5.0 jupyterlab-pygments 0.2.2 jupyterlabserver 2.19.0 jupyterlab-spellchecker 0.7.2 jupyterlab-system-monitor 0.8.0 jupyterlab-topbar 0.6.1 jupyterlab-widgets 1.1.1 jupytext 1.14.4 keras 2.11.0 Keras-Preprocessing 1.1.2 kiwisolver 1.4.4 lark 1.1.5 libpysal 4.7.0 line-profiler 4.0.2 llvmlite 0.39.1 lmdb 1.4.0 locket 1.0.0 lxml 4.9.2 lz4 4.2.0 Mako 1.2.4 mapclassify 2.5.0 Markdown 3.4.1 markdown-it-py 2.1.0 MarkupSafe 2.1.1 matplotlib 3.6.2 matplotlib-inline 0.1.6 mdit-py-plugins 0.3.3 mdurl 0.1.0 mercantile 1.2.1 mgwr 2.1.2 mistune 2.0.4 momepy 0.5.4 morecantile 3.2.5 mpmath 1.2.1 msgpack 1.0.4 multidict 6.0.4 multipledispatch 0.6.0 multiprocess 0.70.14 munch 2.5.0 munkres 1.1.4 mypy 0.991 mypy-extensions 0.4.3 nbclassic 0.4.8 nbclient 0.7.2 nbconvert 7.2.8 nbdime 3.1.1 nbformat 5.7.3 nbgitpuller 1.1.1 nbval 0.9.6 nest-asyncio 1.5.6 netCDF4 1.6.2 networkx 3.0 notebook 6.5.2 notebookshim 0.2.2 numba 0.56.4 numcodecs 0.11.0 numexpr 2.8.3 numpy 1.23.5 oauthlib 3.2.2 odc-algo 0.2.3 odc-cloud 0.2.3 odc-dscache 0.2.2 odc-geo 0.3.3 odc-io 0.2.1 odc-stac 0.3.5 odc-stats 1.0.29 odc-ui 0.2.1.dev3614 opencv-contrib-python-headless 4.7.0.68 opencv-python-headless 4.7.0.68 opt-einsum 3.3.0 ordered-set 4.1.0 orjson 3.8.5 osmnet 0.1.6 otps 0.3.2 OWSLib 0.27.2 packaging 23.0 pamela 1.0.0 pandana 0.6.1 pandas 1.5.2 pandocfilters 1.5.0 panel 0.14.2 param 1.12.3 parso 0.8.3 partd 1.3.0 pathos 0.3.0 pathspec 0.10.3 patsy 0.5.3 pexpect 4.8.0 pickleshare 0.7.5 Pillow 9.2.0 PIMS 0.6.1 pip 22.3.1 pkgutilresolvename 1.3.10 platformdirs 2.6.2 plotly 5.12.0 pluggy 1.0.0 ply 3.11 pointpats 2.2.0 pooch 1.6.0 pox 0.3.2 ppft 1.7.6.6 prometheus-client 0.15.0 prometheus-flask-exporter 0.21.0 prompt-toolkit 3.0.36 protobuf 4.21.12 psutil 5.9.4 psycopg2 2.9.3 ptyprocess 0.7.0 PuLP 2.7.0 pure-eval 0.2.2 pyasn1 0.4.8 pyasn1-modules 0.2.7 pycodestyle 2.10.0 pycparser 2.21 pyct 0.4.6 pycurl 7.45.1 pydantic 1.10.4 pydash 5.1.2 pydotplus 2.0.2 pyerfa 2.0.0.1 pygeos 0.13 Pygments 2.14.0 pyjsparser 2.7.1 PyJWT 2.6.0 pyOpenSSL 23.0.0 pyows 0.2.7 pyparsing 2.4.7 pyproj 3.4.0 PyQt5 5.15.7 PyQt5-sip 12.11.0 pyrsistent 0.19.3 pysal 2.7.0 pysheds 0.3.3 pyshp 2.3.1 PySocks 1.7.1 pystac 1.6.1 pystac-client 0.5.1 pytest 7.2.1 python-dateutil 2.8.2 python-geohash 0.8.5 python-jose 3.3.0 python-json-logger 2.0.4 python-rapidjson 1.9 python-slugify 7.0.0 pyTMD 2.0.0 pytz 2022.7.1 pytz-deprecation-shim 0.1.0.post0 pyu2f 0.1.5 pyviz-comms 2.2.1 PyWavelets 1.4.1 PyYAML 5.4.1 pyzmq 25.0.0 qtconsole 5.4.0 QtPy 2.3.0 quantecon 0.5.3 quilt3 5.0.0 rasterio 1.3.2 rasterstats 0.17.0 regex 2022.10.31 requests 2.28.2 requests-futures 1.0.0 requests-oauthlib 1.3.1 rio-cogeo 3.5.0 rios 1.4.13 rioxarray 0.13.3 rsa 4.7.2 rsgislib 4.1.95 Rtree 1.0.1 ruamel.yaml 0.17.21 ruamel.yaml.clib 0.2.7 rvlib 0.0.6 s2cloudmask 0.1 s3fs 0.6.0 s3transfer 0.6.0 scikit-image 0.19.3 scikit-learn 1.2.0 scipy 1.10.0 seaborn 0.12.2 segregation 2.3.1 Send2Trash 1.8.0 sentry-sdk 1.13.0 setuptools 66.0.0 setuptools-scm 7.1.0 Shapely 1.8.5.post1 sidecar 0.5.2 simpervisor 0.4 simplejson 3.18.1 sip 6.7.5 six 1.16.0 slicerator 1.1.0 smmap 3.0.5 sniffio 1.3.0 snuggs 1.4.7 sortedcontainers 2.4.0 soupsieve 2.3.2.post1 spaghetti 1.7.2 spglm 1.0.8 spint 1.0.7 splot 1.1.5.post1 spopt 0.5.0 spreg 1.3.0 spvcm 0.3.0 SQLAlchemy 1.4.46 stack-data 0.6.2 statsmodels 0.13.5 structlog 22.1.0 sympy 1.11.1 tables 3.7.0 tblib 1.7.0 tenacity 8.1.0 tensorboard 2.11.2 tensorboard-data-server 0.6.1 tensorboard-plugin-wit 1.8.1 tensorflow 2.11.0 tensorflow-estimator 2.11.0 termcolor 2.2.0 terminado 0.17.1 text-unidecode 1.3 threadpoolctl 3.1.0 thredds-crawler 1.5.4 tifffile 2022.10.10 timezonefinderL 4.0.2 tinycss2 1.2.1 tobler 0.9.0 toml 0.10.2 tomli 2.0.1 toolz 0.12.0 tornado 6.2 tornado-proxy-handlers 0.0.5 tqdm 4.64.1 traitlets 5.8.1 traittypes 0.2.1 typingextensions 4.4.0 tzdata 2022.7 tzlocal 4.2 unicodedata2 15.0.0 Unidecode 1.3.6 urbanaccess 0.2.2 urllib3 1.26.14 urlpath 1.2.0 voluptuous 0.13.1 wcwidth 0.2.6 webencodings 0.5.1 websocket-client 1.4.2 Werkzeug 2.2.2 wheel 0.38.4 widgetsnbextension 3.6.1 wrapt 1.14.1 xarray 2022.3.0 xgboost 1.7.1 xyzservices 2022.9.0 yapf 0.32.0 yarl 1.8.2 zarr 2.13.3 zict 2.2.0 zipp 3.11.0 zstandard 0.19.0 ```

- Python
Published by benjimin over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 1.0.13

What's Changed

Docker image now based on micromamba instead of geobase, most dependencies now unpinned (e.g. for the library suite), and other substantial CI updates.

update readme by @pindge in https://github.com/GeoscienceAustralia/dea-sandbox/pull/234
Update odc core and others by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/225
fix file ownership by @pindge in https://github.com/GeoscienceAustralia/dea-sandbox/pull/237
mount to correct path by @pindge in https://github.com/GeoscienceAustralia/dea-sandbox/pull/238
fix github action typo by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/240
fix the empty tag by @emmaai in https://github.com/GeoscienceAustralia/dea-sandbox/pull/241

Full Changelog: https://github.com/GeoscienceAustralia/dea-sandbox/compare/1.0.10...1.0.13

- Python
Published by emmaai over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 1.0.10

- Python
Published by treefern over 3 years ago

https://github.com/geoscienceaustralia/dea-sandbox - 1.0.9

Add odc-geo package #227

- Python
Published by treefern almost 4 years ago