structuralcoexistence
Shiny app to explore structural approach to species coexistence
Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 10 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.4%) to scientific vocabulary
Keywords
Repository
Shiny app to explore structural approach to species coexistence
Basic Info
- Host: GitHub
- Owner: wpetry
- License: mit
- Language: R
- Default Branch: main
- Homepage: https://ecodynamics.shinyapps.io/StructuralCoexistence/
- Size: 44.9 KB
Statistics
- Stars: 11
- Watchers: 1
- Forks: 2
- Open Issues: 2
- Releases: 2
Topics
Metadata Files
README.md
StructuralCoexistence
This is a Shiny app that allows the user to interactively explore the structural approach to coexistence framework described by Saavedra et al. (2017). For the app, I have simply extracted analysis and plotting code from a Dryad repository that accompanies the paper, making modifications for interactivity. Vasco Lepori made the 3D plots and extended the app to 4-species communities.
To use the app, clone this repo locally or try it out online at: https://ecodynamics.shinyapps.io/StructuralCoexistence/
Any errors are most likely mine—please submit an Issue or contact me directly if you find one.
Citations:
This app has been archived in Zenodo and has a citable DOI:
- Petry, W. and V. Lepori. (2022), wpetry/StructuralCoexistence: Initial release (v0.1). Zenodo. https://doi.org/10.5281/zenodo.7114127
We also request that you cite the original paper that inspired our app:
- Saavedra, S., Rohr, R. P., Bascompte, J., Godoy, O., Kraft, N. J. B. and Levine, J. M. (2017), A structural approach for understanding multispecies coexistence. Ecol Monogr, 87: 470–486. doi:10.1002/ecm.1263
Owner
- Name: Will Petry
- Login: wpetry
- Kind: user
- Location: Raleigh, North Carolina
- Company: @DICELab-NCSU
- Website: parameterizeit.github.io
- Twitter: oecodynamics
- Repositories: 1
- Profile: https://github.com/wpetry
Citation (CITATION.cff)
cff-version: 1.1.0
message: "To cite this Shiny app, please use the following."
authors:
- family-names: Petry
given-names: William K.
orcid: https://orcid.org/0000-0002-5230-5987
- family-names: Lepori
given-names: Vasco J.
orcid: https://orcid.org/0000-0002-5086-5171
title: StructuralCoexistence
version: v0.2
date-released: 2022-12-12
GitHub Events
Total
Last Year
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Will Petry | w****y | 29 |
| Vasco Lepori | v****3@b****h | 6 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: about 2 years ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0