Data

Tools

Indexes

Applications

Experiments

Open Source Science

maturity_at_size

Code in R to estimate size at maturity

https://github.com/lvcasrodrigues/maturity_at_size

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.0%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Code in R to estimate size at maturity

Basic Info
  • Host: GitHub
  • Owner: lvcasrodrigues
  • Language: R
  • Default Branch: main
  • Homepage:
  • Size: 812 KB
Statistics
  • Stars: 2
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 1
Created almost 3 years ago · Last pushed 9 months ago
Metadata Files
Readme Citation

README.md

Size at maturity

Here I provide a short code to estimate the size-at-maturity.

Through a generalized linear model under Binomial distribution Bin(n, p) we can estimate the size in which 50% (or other) of population are mature. Such information is pivotal for fishery sciences.

The model needs 3 informations: 1) the size class, preferably with intervals of same amplitudes; 2) number of sampled individuals mature by size class; 3) number of total sampled individuals by size class.

The code also brings a plot (ggplot) and a way to save it in high quality.

Update: I also provided an additional code in order to estimate the size-at-maturity in the Bayesian framework.

Owner

  • Name: Lucas Rodrigues
  • Login: lvcasrodrigues
  • Kind: user

Hello everyone. I'm Lucas, a biologist with one foot in ecology/fisheries sciences and the other in data analysis/stats. Welcome to my interseccional passion.

Citation (CITATION.cff) 

MatSize-version: 1.0.0
message: "If you use this software, please cite it as below."
author:
- family-names: "Rodrigues"
  given-names: "Lucas"
  orcid: "https://orcid.org/0000-0003-2310-2619"
title: "Maturity at size"
version: 1.0.0
doi: 10.5281/zenodo.1234
date-released: 2023-04-02
url: "https://github.com/lvcasrodrigues/maturity_at_size"

GitHub Events

Total
  • Push event: 1
Last Year
  • Push event: 1