cmlxom
A Java library for processing Chemical Markup Language (CML) files.
Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.1%) to scientific vocabulary
Keywords
chemical-markup-language
hacktoberfest
Last synced: 9 months ago
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Repository
A Java library for processing Chemical Markup Language (CML) files.
Basic Info
Statistics
- Stars: 4
- Watchers: 2
- Forks: 6
- Open Issues: 2
- Releases: 12
Topics
chemical-markup-language
hacktoberfest
Created over 6 years ago
· Last pushed 11 months ago
Metadata Files
Readme
License
Citation
README.md
CMLXOM
A Java library for processing CML, implementing the XML object model (XOM) for the Chemical Markup Language (CML).
Releases
Instructions to increase the version:
shell
mvn versions:set -DnewVersion=4.14-SNAPSHOT
Deploy to Sonatype with the following commands, for snapshots and releases respectively:
shell
mvn clean deploy
Owner
- Name: Blue Obelisk
- Login: BlueObelisk
- Kind: organization
- Website: http://www.blueobelisk.org/
- Repositories: 59
- Profile: https://github.com/BlueObelisk
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this software, please cite it as below."
title: CMLXOM
version: 4.13
date-released: 2025-07-20
url: "https://github.com/BlueObelisk/cmlxom"
preferred-citation:
type: article
authors:
- family-names: Murray-Rust
given-names: Peter
- family-names: Rzepa
given-names: Henry S.
title: "CML: Evolution and design"
year: 2011
month: 10
day: 14
journal: Journal of Cheminformatics
volume: 3
issue: 44
doi: 10.1186/1758-2946-3-44
url: https://doi.org/10.1186/1758-2946-3-44
GitHub Events
Total
- Release event: 3
- Issue comment event: 2
- Push event: 8
- Pull request event: 5
- Create event: 6
Last Year
- Release event: 3
- Issue comment event: 2
- Push event: 8
- Pull request event: 5
- Create event: 6
Issues and Pull Requests
Last synced: 9 months ago
All Time
- Total issues: 5
- Total pull requests: 13
- Average time to close issues: 10 months
- Average time to close pull requests: about 1 month
- Total issue authors: 3
- Total pull request authors: 3
- Average comments per issue: 0.8
- Average comments per pull request: 1.0
- Merged pull requests: 11
- Bot issues: 0
- Bot pull requests: 1
Past Year
- Issues: 0
- Pull requests: 3
- Average time to close issues: N/A
- Average time to close pull requests: 2 days
- Issue authors: 0
- Pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 1.0
- Merged pull requests: 3
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- egonw (3)
- merkys (1)
- vala-shinshu (1)
Pull Request Authors
- egonw (13)
- dependabot[bot] (1)
- johnmay (1)
Top Labels
Issue Labels
enhancement (1)
Pull Request Labels
dependencies (1)
Dependencies
pom.xml
maven
- commons-io:commons-io 2.11.0
- joda-time:joda-time 2.11.0
- junit:junit 4.13.2
- org.apache.logging.log4j:log4j-1.2-api 2.18.0
- org.blueobelisk:euclid 2.3
- org.ccil.cowan.tagsoup:tagsoup 1.2.1
- xml-apis:xml-apis 2.0.2
- xom:xom 1.3.7
- xerces:xercesImpl 2.12.2 test
.github/workflows/maven.yml
actions
- actions/checkout v2 composite
- actions/setup-java v2 composite