Data

Tools

Indexes

Applications

Experiments

Open Source Science

imageanalysis_pipeline

https://github.com/enyedilab/imageanalysis_pipeline

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Unable to calculate vocabulary similarity
Last synced: 6 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: EnyediLab
  • License: mit
  • Language: Python
  • Default Branch: main
  • Size: 67.4 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 1
  • Open Issues: 0
  • Releases: 4
Created almost 3 years ago · Last pushed about 2 years ago
Metadata Files
License Citation

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
  - family-names: "Roux"
    given-names: "Benoit Thomas"
    orcid: https://orcid.org/0000-0003-2994-2504
  - family-names: "Dehne"
    given-names: "Fabian Gregor"
    orcid: https://orcid.org/0009-0008-1501-8971
  - family-names: "Tamás"
    given-names: "Szimonetta Xénia"
    orcid: https://orcid.org/0009-0008-3849-5068
title: "ImageAnalysis pipeline + Raw files"
version: v0.4
doi: 10.5281/zenodo.8138956
date-released: 2023-07-12
url: "https://github.com/EnyediLab/ImageAnalysis_pipeline"

GitHub Events

Total
Last Year

Issues and Pull Requests

Last synced: almost 2 years ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Dependencies

Dockerfile docker
  • nvidia/cuda 11.3.1-base-ubuntu20.04 build
for_redistribution_files_only/setup.py pypi
environment.yml pypi
  • dask *
  • dask_image *
  • diplib *
  • fastremap *
  • google-cloud-storage *
  • imagecodecs *
  • llvmlite *
  • mahotas *
  • matplotlib *
  • natsort *
  • nd2reader *
  • numba >=0.53.0
  • numpy >=1.20.0
  • opencv-python ==4.1.2.30
  • opencv-python-headless *
  • pyqt5 ==5.12
  • pyqt5.sip *
  • pyqtgraph >=0.11.0rc0
  • scikit-image *
  • scipy *
  • seaborn *
  • smo *
  • sphinx >=3.0
  • sphinx_rtd_theme *
  • sphinxcontrib-apidoc *
  • tifffile *
  • tqdm *