tadrep - v0.9.2

This is the 2nd v0.9 patch release (v0.9.2) fixing an CLI error regarding max sequence clustering lengths.

• Fixed clustering sequence length threshold: https://github.com/oschwengers/tadrep/commit/06b48476b2ff78a087bacd8fbb56a305541ea686

- Python
Published by oschwengers almost 2 years ago

tadrep - v0.9.1

This is the first v0.9 patch release (v0.9.1) fixing an import error of the database module.

- Python
Published by oschwengers over 2 years ago

tadrep - v0.9

This is the first release providing the new module-based UI.

With this release, TaDReP is executed as a multi-step workflow - one module and subcommand for each step: - local setup - Database creation from public databases - Database creation from local plasmid sequences - Characterization of plasmids - Clustering of plasmids - Detection & reconstruction of plasmids within draft genomes - Visualization of detected & reconstructed plasmids

- Python
Published by oschwengers over 2 years ago

tadrep - v0.4.0

This is a last alpha release before a larger re-write of the entire workflow.

- Python
Published by oschwengers over 2 years ago