eggshell_review

Contains the dataset, phylogenetic tree, and R code related to analyses for the eggshell review project, as published in Legendre et al. (2022, Journal of Anatomy).

https://github.com/lucaslegendre/eggshell_review

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (5.4%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Contains the dataset, phylogenetic tree, and R code related to analyses for the eggshell review project, as published in Legendre et al. (2022, Journal of Anatomy).

Basic Info
  • Host: GitHub
  • Owner: LucasLegendre
  • Language: HTML
  • Default Branch: main
  • Homepage:
  • Size: 23.5 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created about 4 years ago · Last pushed over 3 years ago
Metadata Files
Readme Citation

README.md

eggshell_review

Contains the dataset, phylogenetic tree, and R code related to analyses for the following study:

Legendre, L. J., S. Choi, and J. A. Clarke. 2022. The diverse terminology of reptile eggshell microstructure and its effect on phylogenetic comparative analyses. Journal of Anatomy 241:641–666.

File description:

  • 'Eggshellreviewproject.html': HTML tutorial for the code used in the paper (all references and a detailed description of the protocol can be found in the online Supplementary Information of the paper)

  • 'Eggshellreviewproject.Rmd': original R script used to generate the HTML file, in Markdown format

  • 'Datawhole_newproject.txt': dataset in TXT format, containing egg measurements and scoring for all three scoring procedures for 208 species of reptiles (fully referenced version is included as Supplementary Table 1 in Legendre et al., 2022)

  • 'treewhole_newversion.trees.nex': phylogenetic tree for dataset, in NEXUS format

Owner

  • Name: Lucas Legendre
  • Login: LucasLegendre
  • Kind: user
  • Location: Austin, TX, USA
  • Company: UT Austin

Paleontologist, currently based at the University of Texas at Austin. Interested in vertebrate evolution, phylogenetic comparative methods, and R.

Citation (CITATION.cff)

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
title: eggshell_review
message: Please cite this dataset using these metadata.
type: dataset
authors:
  - given-names: Lucas J
    family-names: Legendre
    email: lucasjlegendre@gmail.com
    affiliation: The University of Texas at Austin
    orcid: 'https://orcid.org/0000-0003-1343-8725'
date-released: 2022-05-05
url: "https://github.com/LucasLegendre/eggshell_review"

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