https://github.com/hbclab/physioanalysis

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https://github.com/hbclab/physioanalysis

Science Score: 8.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
    Organization hbclab has institutional domain (psychology.uiowa.edu)
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (5.0%) to scientific vocabulary
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Created almost 7 years ago · Last pushed about 6 years ago

https://github.com/HBClab/physioAnalysis/blob/master/

# Physio Analysis

- `code/physio.py` contains the functions necessary to currently
  process the GSR data in Bike_ATrain and BikeExtend
- `code/explore_physio.ipynb`, is a notebook that contains the "playground"
  for thinking about how to organize the analysis.
- `environment.yml` specifies the requisite python packages necessary to run the code.
- `data` contains example test data for evaluating the functions.
- `output` contains example output from the script.

## Example call

From the root directory of this repository:

```bash
./code/physio.py data output/testOut
```

To get help type: `./code/physio.py --help`

Example Docker call:

```bash
docker run -it --rm \
       -v ${PWD}:/home/neuro/physioAnalysis \
       -v ${HOME}/.gitconfig:/home/neuro/.gitconfig \
       -v ${HOME}/.git-credentials:/home/neuro/.git-credentials \
       -p 8445:8080 \
       jdkent/physio-analys:dev
```

Owner

  • Name: Health, Brain, & Cognition Lab
  • Login: HBClab
  • Kind: organization

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