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mr.cue

https://github.com/qingcheng0218/mr.cue

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
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    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
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    Academic publication links
    Links to: zenodo.org
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    Academic email domains
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    Institutional organization owner
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    JOSS paper metadata
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    Scientific vocabulary similarity
    Low similarity (6.4%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: QingCheng0218
  • Language: C++
  • Default Branch: main
  • Size: 82.1 MB
Statistics
  • Stars: 5
  • Watchers: 1
  • Forks: 4
  • Open Issues: 1
  • Releases: 1
Created over 3 years ago · Last pushed over 2 years ago
Metadata Files
Readme Citation

README.md

MR.CUE

MR.CUE is a package for Mendelian randomization informs shared genetic etiology underlying exposure and outcome by interrogating correlated horizontal pleiotropy.

Installation

Install the development version of MR.CUE by use of the 'devtools' package. Note that MR.CUE depends on the 'Rcpp' and 'RcppArmadillo' package, which also requires appropriate setting of Rtools and Xcode for Windows and Mac OS/X, respectively. library(devtools) install_github("QingCheng0218/MR.CUE@main")

If you have errors installing this package on Linux, try the following commands in R: ``` Sys.setlocale(category = "LCALL", locale = "EnglishUnited States.1252") Sys.setenv(LANG="enUS.UTF-8") Sys.setenv(LCALL="en_US.UTF-8")

library(devtools) install_github("QingCheng0218/MR.CUE@main") ```

Usage

The 'MR.CUE' vignette will provide a good start point for Mendelian randomization analysis using MR.CUE package.

References

Qing Cheng, Xiao Zhang, Lin S. Chen+, Jin Liu+. Mendelian randomization accounting for complex correlated horizontal pleiotropy while elucidating shared genetic etiology. Nat Commun 13, 6490 (2022). https://doi.org/10.1038/s41467-022-34164-1

Development

This package is developed and maintained by Qing Cheng (qingcheng0218@gmail.com). Cite the code:DOI

Owner

  • Login: QingCheng0218
  • Kind: user

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Cheng"
  given-names: "Qing"
- family-names: "Zhang"
  given-names: "Xiao"
- family-names: "Chen"
  given-names: "Lin"
- family-names: "Liu"
  given-names: "Jin"
  
title: "Mendelian randomization informs shared genetic etiology underlying exposure and outcome by interrogating correlated horizontal pleiotropy"
version: 1.0
doi: 10.5281/zenodo.7134872
date-released: 2022-10-02
url: "https://github.com/QingCheng0218/MR.CUE"

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Dependencies

DESCRIPTION cran
  • Rcpp >= 1.0.8.3 imports
MR.CUE/DESCRIPTION cran
  • Rcpp >= 1.0.9 imports