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Recent Releases of ijtiff

ijtiff - ijtiff 3.1.3

ijtiff 3.1.3

MINOR IMPROVEMENTS

  • Fix PROTECTion error.

ijtiff 3.1.2

BUG FIXES

Doc fix for write_tif(). See issue #23.

ijtiff 3.1.1

BUG FIXES

  • Fix a PROTECTion error in tags.c.

Scientific Software - Peer-reviewed - R
Published by rorynolan 9 months ago

ijtiff - ijtiff 3.1.0

MINOR IMPROVEMENTS

  • display() now uses base R's graphics and grDevices so the dependency on the (large) imager package is removed.

BUG FIXES

  • Fixed memory leaks in tag handling code by ensuring proper buffer cleanup.
  • Added TIFF file validation to prevent memory leaks when handling invalid files.
  • Improved error messages for invalid TIFF files.
  • All tags now included in print() method.

Scientific Software - Peer-reviewed - R
Published by rorynolan 10 months ago

ijtiff -

ijtiff 3.0.0

NEW FEATURES

  • Support almost all tags that libtiff does.
    • See the list at https://libtiff.gitlab.io/libtiff/functions/TIFFGetField.html.
    • Willing to support others, just open an issue to make a feature request.

Scientific Software - Peer-reviewed - R
Published by rorynolan 10 months ago

ijtiff - v2.3.2

ijtiff 2.3.2

MINOR IMPROVEMENTS

  • Add libwebp and libzstd to README installation instructions.

ijtiff 2.3.1

BUG FIXES

  • Fix test for new waldo.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 2 years ago

ijtiff - ijtiff 2.3.0

MINOR IMPROVEMENTS

  • Use rlang::abort() and its error message formatting.
  • Move away from magrittr's %<>%.

Scientific Software - Peer-reviewed - R
Published by rorynolan almost 3 years ago

ijtiff - ijtiff 2.2.8

BUG FIXES

  • Fix headings in NEWS.md..

Scientific Software - Peer-reviewed - R
Published by rorynolan over 3 years ago

ijtiff - ijtiff 2.2.7

BUG FIXES

  • Fix for new libtiff using C99's <stdint.h>.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 4 years ago

ijtiff - ijtiff 2.2.6

BUG FIXES

  • Suppress unhelpful warnings during configure when pkg-config doesn't find info for libtiff.
  • Remove LazyData from DESCRIPTION (was causing CRAN note).

Scientific Software - Peer-reviewed - R
Published by rorynolan over 4 years ago

ijtiff - ijtiff 2.2.5

BUG FIXES

  • Typo fix for configure. At one point there was a call of pkg-configs instead of pkg-config.
  • Also now all compile flags from pkg-config --libs and pkg-config --libs --static are used every time.

Scientific Software - Peer-reviewed - R
Published by rorynolan almost 5 years ago

ijtiff - ijtiff 2.2.4

Make configure more portable by using sh instead of bash.

Scientific Software - Peer-reviewed - R
Published by rorynolan about 5 years ago

ijtiff - ijtiff 2.2.2

ijtiff 2.2.2

BUG FIXES

  • Insist on bug-fixed strex >= 1.4.

ijtiff 2.2.1

BUG FIXES

  • Insist on strex >= 1.3.1 to avoid a garbage collection issue.

Scientific Software - Peer-reviewed - R
Published by rorynolan about 5 years ago

ijtiff - ijtiff 2.2.0

ijtiff 2.2.0

NEW FEATURES

  • The package now works on 32-bit Windows (thanks to PR #12 from Jeroen Ooms).

BUG FIXES

  • Fix tests by making use of testthat::test_path().

ijtiff 2.1.2

BUG FIXES

  • Fix some typos in the vignettes.

ijtiff 2.1.1

BUG FIXES

  • Fix a PROTECTion error.

ijtiff 2.1.0

NEW FEATURES

  • Add support for images with colormaps (also known as lookup tables (LUTs)).
  • Add a print method for ijtiff_imgs.

ijtiff 2.0.5

BUG FIXES

  • Fix a test that failed due to breaking changes in tibble.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 5 years ago

ijtiff - ijtiff 2.0.4

MINOR IMPROVEMENTS

  • Include rOpenSci docs in DESCRIPTION as URL.

BUG FIXES

  • Sometimes pkg-config declares that ijtiff needs JBIG_KIT (compile flag -ljbig) at compile time. This is incorrect and it often causes users installation pain. This fix is a hack that removes this compile flag from the pkg-config output.

Scientific Software - Peer-reviewed - R
Published by rorynolan about 6 years ago

ijtiff - ijtiff 2.0.3

BUG FIXES

  • libjpeg needs to be in SystemRequirements.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 6 years ago

ijtiff - ijtiff 2.0.2

BUG FIXES

  • For ImageJ-written images, if n_slices and n_frames are both specified, that should be OK if they're equal.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 6 years ago

ijtiff - ijtiff 2.0.1

BUG FIXES

  • Insist on latest, bug-fixed filesstrings 3.1.5.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 6 years ago

ijtiff - ijtiff 2.0.0

BREAKING CHANGES

  • get_tiff_tags_reference() is now tif_tags_reference().
  • count_imgs() is now count_frames().

NEW FEATURES

  • It is now possible to read only certain frames of a TIFF image thanks to the frames argument of read_tif().
  • read_tif() and read_tags() now have the aliases tif_read() and tags_read() to comply with the rOpenSci objevt_verb() style.

BUG FIXES

  • Include sys/types.h for greater type compatibility.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 6 years ago

ijtiff - Include ZIP compression

NEW FEATURES

  • Allow ZIP compression (which seems to be the best).

BUG FIXES

  • write_txt_img() was using decimal points for integers (e.g. 3.000 instead of just 3).

Scientific Software - Peer-reviewed - R
Published by rorynolan about 7 years ago

ijtiff - Bug fixes for CRAN Solaris.

ijtiff 1.4.2

BUG FIXES

  • Hacky fix for configure script to deal with lack of -ljbig on Solaris.
  • Trim the package to below 5MB by compressing a few TIFF files.

Scientific Software - Peer-reviewed - R
Published by rorynolan about 7 years ago

ijtiff - Fix `configure` script.

ijtiff 1.4.1

NEW FEATURES

  • The package is now lighter in appearance because it doesn't explicitly depend on tibble.

BUG FIXES

  • The configure script now allows for needing --static with pkg-config.

Scientific Software - Peer-reviewed - R
Published by rorynolan about 7 years ago

ijtiff - Major improvements in documentation.

ijtiff 1.4.0

NEW FEATURES

  • A pkgdown website.

MINOR IMPROVEMENTS

  • Better vignettes.
  • Better error messages.

ijtiff 1.3.0

NEW FEATURES

  • Conversion functions linescan_to_stack() and stack_to_linescan() useful for FCS data.

ijtiff 1.2.0

MINOR IMPROVEMENTS

  • Improved the description of the package in DESCRIPTION, vignette and README.
  • Added a hex sticker.
  • Limited support for tiled images thanks to new author Kent Johnson.
  • write_tif() is now slightly (<10%) faster.
  • write_tif() messages are now more informative.

Scientific Software - Peer-reviewed - R
Published by rorynolan over 7 years ago

ijtiff - Add `read_tags()` and `count_imgs()`

NEW FEATURES

  • count_imgs() counts the number of images in a TIFF file without reading the images themselves.
  • read_tags() reads the tags from TIFF images without reading the images themselves.

MINOR IMPROVEMENTS

  • Now includes citation information.
  • C code is more readable.
  • display() is more flexible, accepting 3 and 4-dimensional arrays, just displaying the first frame from the first channel.

(#2)

Scientific Software - Peer-reviewed - R
Published by rorynolan over 7 years ago

ijtiff - Peer-reviewed by ROpenSci

The package is now in a usable, stable state.

Scientific Software - Peer-reviewed - R
Published by rorynolan almost 8 years ago