tarlinton_2022_hive_microbiome
Supplementary material for the paper "16S Amplicon Metabarcoding from Nest Materials of Native Australian Stingless Bees"
https://github.com/invertebrate-microbiology-group/tarlinton_2022_hive_microbiome
Science Score: 67.0%
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Supplementary material for the paper "16S Amplicon Metabarcoding from Nest Materials of Native Australian Stingless Bees"
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Metadata Files
README.md
Australian Stingless Bee Nest Microbiome
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Authors: Boyd Tarlinton, Flavia Carmelina Massaro, Caroline Hauxwell
This repository contains the code and documentation required to reproduce the results presented in our paper "16S Amplicon Metabarcoding of the Nest Materials of Native Australian Stingless Bees". Beta diversity statistics describing microbiome variability associated with the different bee species and material types sampled are calculated, visualised, and used for hypothesis testing.
We describe how the raw metabarcoding datasets were processed using QIIME 2
and further analysed in R to produce the figure included in our paper. This
material is presented as a GitHub Pages site made with Quarto. An renv
snapshot is provided to aid with reproducibility.
View the live content here.
Owner
- Name: Invertebrate-Microbiology-Group
- Login: Invertebrate-Microbiology-Group
- Kind: organization
- Repositories: 1
- Profile: https://github.com/Invertebrate-Microbiology-Group
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
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cff-version: 1.2.0
title: Australian Stingless Bee Nest Microbiome
message: >-
If you use this resource, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Boyd
family-names: Tarlinton
email: tarlintb@qut.edu.au
orcid: 'https://orcid.org/0000-0002-4146-7083'
affiliation: >-
School of Biology and Environmental Science,
QUT
- given-names: Flavia Carmelina
family-names: Massaro
email: cfmassaro@gmail.com
orcid: 'https://orcid.org/0000-0003-2558-413X'
affiliation: >-
School of Biology and Environmental Science,
QUT
- affiliation: >-
School of Biology and Environmental Science,
QUT
given-names: Caroline
family-names: Hauxwell
orcid: 'https://orcid.org/0000-0002-1681-9657'
email: caroline.hauxwell@qut.edu.au