kraken2_classification - Full containerization

v2.0 (Breaking changes introduced to to configuration files and the ways parameters are used). This set of changes did a bit to modernize the pipeline: * All steps are now available with containerized execution * Created separate pipeline Snakefile_downstream_only which works from a list of report files to only un the downstream analysis steps. * Included a small test dataset and better test execution * Various code and README/manual changes * License file added

- Python
Published by bsiranosian almost 3 years ago

kraken2_classification - A mostly finished pipeline

- Python
Published by bsiranosian over 4 years ago