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Recent Releases of nf-resequencing-mem

nf-resequencing-mem - v0.6.2

What's Changed

  • :arrow_up: upgrade markduplicate step by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/78
  • :construction_worker: update CI system by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/83
  • :boom: add vcfallelicprimitive step by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/84
  • :sparkles: convert freebayes specific parameters in pipeline parameters by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/85
  • :rotating_light: solve linter issues related to VScode and nextflow languageserver by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/87
  • :arrow_up: upgrade freebayes to the latest release by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/89
  • :wrench: configure options and conditional steps by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/91
  • :sparkles: support normalization only subworkflow by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/93
  • :bookmark: release v0.6.2 by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/79

Full Changelog: https://github.com/cnr-ibba/nf-resequencing-mem/compare/v0.6.1...v0.6.2

- Nextflow
Published by bunop about 1 year ago

nf-resequencing-mem - v0.6.1

What's Changed

  • :zap: Optimize samtools/depth step by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/74

Full Changelog: https://github.com/cnr-ibba/nf-resequencing-mem/compare/v0.6.0...v0.6.1

- Nextflow
Published by bunop about 2 years ago

nf-resequencing-mem - v0.6.0

What's Changed

  • :construction_worker: update linting workflows by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/61
  • Issue 9.1 by @lazzarib in https://github.com/cnr-ibba/nf-resequencing-mem/pull/66
  • :sparkles: deal with CRAM alignments by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/63
  • :sparkles: Annotate VCF file with SnpEff by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/67
  • :wrench: configure MultiQC analysis by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/68
  • :arrow_up: upgrade modules by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/69
  • :bookmark: release v0.6.0 by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/62

New Contributors

  • @lazzarib made their first contribution in https://github.com/cnr-ibba/nf-resequencing-mem/pull/66

Full Changelog: https://github.com/cnr-ibba/nf-resequencing-mem/compare/v0.5.2...v0.6.0

- Nextflow
Published by bunop about 2 years ago

nf-resequencing-mem - v0.5.2

What's Changed

  • :arrow_up: upgrade module dependencies by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/52
  • :sparkles: use MultiQC with all supported tools by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/55
  • :bookmark: pipeline release v0.5.2 by @bunop in https://github.com/cnr-ibba/nf-resequencing-mem/pull/54

Full Changelog: https://github.com/cnr-ibba/nf-resequencing-mem/compare/v0.5.1...v0.5.2

- Nextflow
Published by bunop over 2 years ago