ReproZip - 1.3

(reprozip and reprounzip only)

Enhancements: * Store used UNIX sockets in the trace * Display a warning if the process connect to the systemd socket (https://docs.reprozip.org/s/systemd.html) * Print trace warnings in red (files read then written, systemd socket) * Improve message on interrupt, making clearer what happens if pressing twice * Change "(d)elete" option to "(o)verwrite" in prompt when a trace exists

Downloads: - reprozip - reprounzip - reprounzip-docker 1.2 - reprounzip-vagrant 1.2 - reprounzip-vistrails 1.2 - reprozip-jupyter 1.2 - reprounzip-qt 1.2.1

Scientific Software - Peer-reviewed - Python
Published by remram44 about 2 years ago

ReproZip - 1.2

Bugfixes: * Don't mark symlinks as input files * Fix reprounzip-vagrant not terminating after it says that it can't install packages * Add defense for CVE-2007-4559 * Fix OrderedSet for Python 3.10+ compatibility

Enhancements: * Recognize Ruby gems and apps and gather the whole environment * Don't mark Python .pth files as input files * Accept ZIP files in addition to TAR for RPZ files (reprozip doesn't currently create ZIP files) * Handle more Linux system calls: faccessat2, statx, execveat, clone3, openat2, fchownat, fchmodat, accept4, renameat2

Downloads: - reprozip - reprounzip - reprounzip-docker - reprounzip-vagrant - reprounzip-vistrails - reprounzip-jupyter - reprounzip-qt

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 3 years ago

ReproZip - 1.1

(reprounzip-vistrails didn't change)

Bugfixes: * Fix possible crash reading docker inspect output * Fix reprozip-jupyter on more recent Tornado * Fix failure in reprounzip-docker upload if /bin/sh is missing * Have reprounzip directory execute with the correct interpreter (e.g. packed ld-linux.so) * Fix "invalid cross-device link" errors in vagrant download if the destination is not on the same device as the unpacked directory

Enhancements: * Add PyQt5 compatibility to reprounzip-qt * reprounzip-docker: Keep ownership of uploaded files * Add a new certificate to download parameters, valid through 2121 (previous expires 2024) * Always show full path of executed files in reprozip testrun * Improved merging of pack on top of base image in reprounzip-docker * Made sure the root is a mountpoint in reprounzip-vagrant, as some applications expect it (e.g. Elasticsearch) * Disable unpacker options that won't work in reprounzip-qt (e.g. 'directory' and 'chroot' on non-Linux)

Downloads: - reprozip - reprounzip - reprounzip-docker - reprounzip-vagrant - reprounzip-vistrails 1.0.16 - reprounzip-jupyter - reprounzip-qt - Windows installer (Python 3.9, reprounzip, plugins and GUI) - Mac Installer (Python 3.9, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 4 years ago

ReproZip - 1.0.16

(reprozip-jupyter and reprounzip-vagrant didn't change)

Bugfixes: * Fixed input/output file filter on Python 3 (to omit .so, .pyc etc files) * Fixed fetching updated parameters on Python 3 (to get the correct Docker and Vagrant base images, a small JSON file is downloaded from reprozip.org) * Fixed --port option of reprounzip-docker

Enhancements: * Use the distro module instead of the deprecated platform.linux_distribution() function to detect the distribution (the latter will be removed in Python 3.8). * Use dpkg-query to identify Linux packages instead of reading dpkg/info/*.list

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant 1.0.13 (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - reprounzip-jupyter 1.0.14 (wheel, tarball) - reprounzip-qt (wheel, tarball)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 7 years ago

ReproZip - 1.0.15

(reprounzip-qt only)

Bugfixes: * Fixed running command from reprounzip-qt on Windows * Fixed using Jupyter from reprounzip-qt

Downloads: - reprozip 1.0.14 (tarball) - reprounzip 1.0.13 (wheel, tarball) - reprounzip-docker 1.0.13 (wheel, tarball) - reprounzip-vagrant 1.0.13 (wheel, tarball) - reprounzip-vistrails 1.0.13 (wheel, tarball) - reprounzip-jupyter 1.0.14 (wheel, tarball) - reprounzip-qt (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI) - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 7 years ago

ReproZip - 1.0.14

(reprozip, reprounzip-qt and reprozip-jupyter only)

Bugfixes: * Fixed reprounzip-qt refusing to close when an experiment is still unpacked, even after the user provided confirmation * Fixed reprozip-jupyter on Python 3 * Fixed running gnome-terminal from reprounzip-qt, made it preferred over xterm * Don't duplicate the latest run in the config file when the trace didn't add a run (for example because the command does not exist)

Enhancements: * Uniformized logos and icons * Native terminal opened by reprounzip-qt waits for a key after success before closing * Officially support reprounzip-qt and reprozip-jupyter on Python 3

Downloads: - reprozip (tarball) - reprounzip 1.0.13 (wheel, tarball) - reprounzip-docker 1.0.13 (wheel, tarball) - reprounzip-vagrant 1.0.13 (wheel, tarball) - reprounzip-vistrails 1.0.13 (wheel, tarball) - reprounzip-jupyter (wheel, tarball) - reprounzip-qt (wheel, tarball) - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 7 years ago

ReproZip - 1.0.13

Bugfixes: * Fix uninitialized return value making some xxx_at() calls abort the trace * Fix some other warnings via static analysis

Enhancements: * Show a warning when executing a file that has the set-uid or set-gid bit set, since Linux will not give it its privileges, making it confusing for users why their run failed * Make reprounzip-docker run even without a TTY * Correctly handle experiment returning non-0 in Docker * The C extension now logs through Python's logging facilities ('reprozip' logger) * Collect usage information from reprounzip-qt as well

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - reprounzip-jupyter 0.4 (wheel, tarball) - reprounzip-qt (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI) - Mac Installer 1.0.12 (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 7 years ago

ReproZip - 1.0.12

(reprozip, reprounzip-qt and reprozip-jupyter only)

Bugfixes: * Fix some kernel/libc issuing unrecognized openat() calls, resulting in files missing in the trace * Fix openat() calls recording read-write as simply write * Fix double-click on .RPZ file

Downloads: - reprozip (tarball) - reprounzip 1.0.11 (wheel, tarball) - reprounzip-docker 1.0.10 (wheel, tarball) - reprounzip-vagrant 1.0.10 (wheel, tarball) - reprounzip-vistrails 1.0.8 (wheel, tarball) - reprounzip-jupyter 0.3 (wheel, tarball) - reprounzip-qt (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI) - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 8 years ago

ReproZip - 1.0.11

(reprounzip-docker, reprounzip-vagrant, and reprounzip-vistrails didn't change)

Bugfixes: * Write timestamp in config with timezone offset * Always fix up PATH on MacOS (to pick up Docker) * Don't have reprounzip-qt choke on MacOS's -psn_x_xxxx arguments * Fix "Couldn't find reprounzip command" in the GUI on Windows if installed from the installer and opened a package by double-click

Enhancements: * Improve DOT graph layout * Don't silently overwrite output with reprounzip graph * Add --regex-include to reprounzip graph * reprozip trace now returns 125 for tracing errors (previously 1), and returns the traced program's exit code otherwise (previously always 0) * Manpages are available

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker 1.0.10 (wheel, tarball) - reprounzip-vagrant 1.0.10 (wheel, tarball) - reprounzip-vistrails 1.0.8 (wheel, tarball) - reprounzip-jupyter 0.2 (wheel, tarball) - reprounzip-qt (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 8 years ago

ReproZip - 1.0.10

(reprounzip-vistrails didn't change)

Bugfixes: * Correctly escape shell commands containing backticks * Overwrite tty prompt works correctly on Python 3 * Fix /proc in vagrant-chroot and chroot having outside mounts * Fix ANSI escapes showing in Qt terminal dialog * Fix reprozip combine crash on Python 3.6 (patch from James Clarke) * Using graph --packages drop together with --json no longer crashes

Enhancements: * New reprozip-jupyter tool to trace and reproduce Jupyter notebooks * reprozip_jupyter can be registered as a Jupyter extension to trace notebooks from the Jupyter web interface * The Qt GUI knows to run packages with reprozip-jupyter if they are notebook environments (kernels) unpacked with Docker (and reprozip-jupyter is installed) * Add --docker-cmd to reprounzip-docker to select the Docker command (for example --docker-cmd="sudo docker") * Implement --expose-port option for Vagrant and Docker (no need for --docker-option=-p...) * Add docker-machine support to GUI (select which machine to use) * Better binaries for MacOS * Automatically register reprounzip-qt to open .RPZ files on Linux * Register ReproUnzip with Windows from installer * Add icon from @heng2j

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 1.0.8 (wheel, tarball) - reprounzip-jupyter 0.1 (wheel, tarball) - reprounzip-qt (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI) - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 8 years ago

ReproZip - 1.0.9

(reprounzip-vistrails didn't change)

Bugfixes: - Fix CentOS Docker image versions - Remove Fedora Docker images, they don't have tar - Do include .pyc files in packages, so reproduction take same code path - Don't use the experiment's resolv.conf file - Fix handling of files opened in read-write mode

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 1.0.8 (wheel, tarball) - reprounzip-qt 0.2 (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI) - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 9 years ago

ReproZip - 1.0.8

Behavior changes: - No longer default to overwriting trace directories. ReproZip will ask what to do or exit with an error if one of --continue/--overwrite is not provided

Bugfixes: - Fix an issue identifying Debian packages when a file's in two packages - Fix Python error Mixing iteration and read methods would lose data - Fix reprounzip info showing some numbers as 0 instead of hiding them in non-verbose mode - Another fix to X server IP determination for Docker

Enhancements: - New GUI for reprounzip, allowing one to unpack without using the command-line - Add filters to remove some common files types from packed files (.pyc) or detected input files (.py, .so, ...) - Add JSON output format to reprounzip info - Allow using the Virtualbox display to reproduce X11-enabled experiments

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - reprounzip-qt 0.1 (wheel, tarball) - Windows installer (Python 2.7, reprounzip, plugins and GUI) - Mac Installer (Python 2.7, reprounzip, plugins and GUI)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 9 years ago

ReproZip - 1.0.7

(reprounzip-vistrails didn't change)

Bugfixes: - Correctly show an error message if ptrace is unavailable - Make Docker & Vagrant setup much faster

Enhancements: - Add support for RPM-based distributions, in addition to Debian-based

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 1.0.5 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 9 years ago

ReproZip - 1.0.6

(reprounzip-vistrails didn't change)

Bugfixes: - Fixes error using Docker with--enable-x11 on Python 3

Enhancements: - docker run gets a --detach command, to keep the container running (useful for starting servers on remote machines) - Restrictions on upload and download commands have been relaxed, in particular it is possible to download input files as well as output files - Don't compress outer tar (data is still compressed); this should make some operations (like reprounzip info) faster - Add reprozip combine, useful to combine multiple traces into one (as different runs). Handy if running distributed experiments on shared filesystem (MPI)

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 1.0.5 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 9 years ago

ReproZip - 1.0.5

(reprounzip-vagrant didn't change)

Bugfixes: - Correctly download parameters from server - More reliable way of determining X server IP without using /bin/ip

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant 1.0.4 (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 9 years ago

ReproZip - 1.0.4

Behavior changes: - reprounzip will no longer run on Python 2.6

Bugfixes: - Fixes file download not using cache if URL is HTTPS - Fixes unpacking with directory or chroot for some multi-step packages

Features: - Add --docker-option to pass raw options to Docker - You can use run or run - to run every run, regardless of their number - Allow download <name>, shortcut for download <name>:./<name> (downloads to current directory, keep name) - Allow download --all - Add --input and --output to showfiles - Implement vagrant suspend command - Do file downloads with requests - Download a parameter file to update URLs and image names without waiting for the next ReproZip version

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 10 years ago

ReproZip - 1.0.3

Bugfixes: - You could get a traceback with some unpackers (not Vagrant) on some packages that explicitely pack the / directory - Some environment variables prevented running, such as bash exported functions.

Features: - Remove setup directory if setup fails, so you can run setup again without gettin target directory exists - Add --set-env and --pass-env to run

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 10 years ago

ReproZip - 1.0.2

Bugfixes: - You can now use X11 forwarding even with a remote Docker daemon - reprounzip-vagrant now works in paths containing spaces

We have now Conda packages for Python 3.

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 10 years ago

ReproZip - 1.0.1

(all but reprounzip-vistrails)

Bugfixes: - Files opened through a shebang were stored with a wrong process number - Running with Docker on non-Linux machine didn't work (e.g. docker-machine); now only X11 doesn't work. - Some fixes to the graph command

Features: - --memory option for reprounzip vagrant setup, to set the VM's RAM.

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 1.0.0 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 10 years ago

ReproZip - 1.0.0

Behavior change: - .rpz pack format changed (version 1 -> 2). Pack is now uncompressed, data is in a nested TGZ archive; allows faster retrieval of metadata (config & trace). - reprozip trace warnings are now info messages; won't show up without -v

Bugfixes: - After restarting a Vagrant machine, /dev and /proc wouldn't be mounted anymore - Files or links referenced in a shebang could be missed by the tracer

Features: - Runs in the configuration file now have an 'id' field, that will be shown by 'reprounzip info' and can be selected when running - Reworked reprounzip graph: level of details, regex filters & replace, JSON output - Added run argument to reprounzip showfiles, to show inputs & outputs of a single run

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 10 years ago

ReproZip - 0.7.2

(all but reprounzip-vistrails)

Behavior change: - reprounzip-docker will now re-use the resulting image from the previous run when running again, instead of starting from scratch; a 'reset' command has been added to undo runs and uploads.

Bugfixes: - Couldn't reset an input file to the original (packed) file on Python 3 - Don't show a warning about network connections when they didn't succeed - Hide traceback when failing because Vagrant is not installed - Fix input/output file detection assigning files to the same run - Fix selecting multiple runs in 'docker run'

Features: - Display the relative portion of the path when unhandled xxx_at() syscalls are used, to give an idea of what's been missed - Add --dont-find-inputs-outputs to reprozip trace and reset, so you can clear that out if too many files would be selected (or if you don't use the feature) - Rewrote reprounzip-vistrails plugin; uses a proper VisTrails package that now lives in the VisTrails distribution. - Check pack format in unpackers; won't try to unpack version 2 - It is now possible to select multiple runs with unpackername run 1-4

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 0.7 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 10 years ago

ReproZip - 0.7.1

(reprozip only)

Bugfixes: - Files (or links) created with rename, link or symlink then read will no longer be packed. - A buffer overflow could happen in the log module, for instance when the experiment passes a very long argument to execve (over 4kB in a single argument) and running in debug mode (-v -v)

Downloads: - reprozip (tarball) - reprounzip 0.7 (wheel, tarball) - reprounzip-docker 0.7 (wheel, tarball) - reprounzip-vagrant 0.7 (wheel, tarball) - reprounzip-vistrails 0.7 (wheel, tarball) - Windows installer 0.7 (Python 2.7, reprounzip and plugins) - Mac Installer 0.7 (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 10 years ago

ReproZip - 0.7

Behavior change: - No longer accept passing -v after the subcommand; use reprozip -v testrun ..., not reprozip testrun -v. - Rely on PTHREAD_EVENT_EXEC to handle execve(). Makes tracing more reliable, and enable it to behave correctly on weird kernels (like UML). - Rely on PTRACE_EVENT_FORK to handle fork/vfork/clone. Fixes vfork() deadlocking under trace. - Completely changed the structure of input and output files (old packs will still be loaded, but new packs are not retro-compatible). - Using one of the run commands without specifying a number will no longer default to running all of them; it will error out if there are multiple runs.

Bugfixes: - Fix insertion speed in SQLite3 database

Features: - Makes VMs (Vagrant or Docker) more resilient to massive breakage of system libraries (obliterating /lib or /usr, when using very different operating systems) by putting busybox in / and using rpzsudo. - No longer use dpkg -S to identify packages, do a single pass over internal dpkg database (this is considerably faster).

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 10 years ago

ReproZip - 0.6.4

(reprounzip-vistrails didn't change)

Bugfixes: - Tracer: correctly handle chdir() in multi-threaded processes - Fix leaked file descriptors, eventually making SQLite3 fail - No longer exceed cmdline length in Dockerfile in big .RPZ pack - Fixes check_output call when running Docker (not available in Python 2.6) - Fixes installation of sudo failing if original machine wasn't Debian - Don't make TAR error status fatal in Dockerfile (might not run; this is needed because Docker mount some files in the container that can't be overwritten)

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 0.6.3 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 10 years ago

ReproZip - 0.6.3

(reprounzip and plugins only)

Bugfixes: - Fixes reprounzip-vistrails failing because of reporting - Fixes reprounzip-vistrails not escaping correctly in XML in some conditions - Fixes docker run failing to read Docker's JSON output on Python 3 - Fixes reprounzip chroot mounting too many filesystems - Fixes typo stopping reprounzip from running on unsupported distribs

Features: - Adds Debian 8 'Jessie' to Vagrant boxes & Docker images - Adds Ubuntu 15.04 'Vivid' to Vagrant boxes & Docker images

Downloads: - reprozip 0.6.2 (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 10 years ago

ReproZip - 0.6.2

(reprozip only)

Bugfixes: - Fixes reprozip not showing traceback on exception - Fixes bug with multiple runs (trace --continue)

Downloads: - reprozip (tarball) - reprounzip 0.6 (wheel, tarball) - reprounzip-docker 0.6 (wheel, tarball) - reprounzip-vagrant 0.6 (wheel, tarball) - reprounzip-vistrails 0.5 (wheel, tarball) - Windows installer 0.6 (Python 2.7, reprounzip and plugins) - Mac Installer 0.6 (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 11 years ago

ReproZip - 0.6.1

(reprozip only)

Bugfixes: - Fixes an overflow in _pytracer for some syscalls.

Downloads: - reprozip (tarball) - reprounzip 0.6 (wheel, tarball) - reprounzip-docker 0.6 (wheel, tarball) - reprounzip-vagrant 0.6 (wheel, tarball) - reprounzip-vistrails 0.5 (wheel, tarball) - Windows installer 0.6 (Python 2.7, reprounzip and plugins) - Mac Installer 0.6 (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 11 years ago

ReproZip - 0.6

(reprounzip-vistrails didn't change)

Bugfixes: - Fixes debug log messages not being printed - Pressing Ctrl+C wouldn't stop package identification with KeyboardInterrupt - Fixes an error message while destroying a docker experiment - Fixes docker not installing packages if they were packed - Fixes docker always reporting exit status 0

Features: - Adds --install-pkgs options to docker setup, to prefer installing from package manager over unpacking the packed files - With vagrant or docker, original machine hostname is restored - X11 support for chroot, vagrant and docker unpackers

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 0.5 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 almost 11 years ago

ReproZip - 0.5.1

(reprounzip-vistrails didn't change)

Bugfixes: - Goes back to pack format 0.4: generates .rpz files readable by older reprounzip versions - Fixes experiment not having a PTY in some conditions - Rewrite absolute paths on command-line for directory unpacker

Features: - Python 2.6 support for reprounzip (except 'graph') - Makes error messages more readable - Default trace directory renamed from .reprozip to .reprozip-trace - Adds a log file under $HOME/.reprozip/log - reprounzip-vagrant will use 'ssh' executable if it's available; should be more reliable, especially on Windows - Automatically collects usage information. Nothing will be sent before you opt-in, and we made sure to only collect general details

Downloads: - reprozip (tarball) - reprounzip (wheel, tarball) - reprounzip-docker (wheel, tarball) - reprounzip-vagrant (wheel, tarball) - reprounzip-vistrails 0.5 (wheel, tarball) - Windows installer (Python 2.7, reprounzip and plugins) - Mac Installer (Python 2.7, reprounzip and plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 11 years ago

ReproZip - 0.5

Features: - All reprounzip plugins can be installed with pip install reprounzip[all] - Various improvements to interactive vagrant console - Adds support for generic plugins (alongside unpackers) - Adds reprounzip-vistrails plugin - Pressing Ctrl+C while tracing won't abort anymore; press it twice for SIGKILL

Scientific Software - Peer-reviewed - Python
Published by remram44 about 11 years ago

ReproZip - 0.4.1

This is a minor release. Apart from bug fixes, it adds the 'docker upload' command to substitute input files in docker containers, and a set of signals that will be used by future plugins.

Bugfixes: - reprounzip showed duplicated logging messages - Makes 'run' commands not fail if the command returns an error code - Unicode issues with Vagrant on Windows Python 3 - Warning for files read then written didn't show the filenames - Fixes resetted input files breaking 'showfiles'

Features: - 'docker upload' command - Adds signals (currently unused, needed for future plugins)

Scientific Software - Peer-reviewed - Python
Published by remram44 about 11 years ago

ReproZip - 0.4

This is a feature release. The whole interface of reprounzip has been reworked; experiments are now run directly from reprounzip, eliminating the need to SSH into virtual machines or running autogenerated shell scripts. Also introduces input file substitution and output file extraction, and the Docker unpacker.

Bugfixes: - Copying files from host to chroot when some packages where not packed - Don't use the full command path in directory's script - Fixes socketcall() handling

Features: - Displays a warning for READ_THEN_WRITTEN files - chroot restores files' owner/group - Adds 'reprounzip info' command - Better error messages when trying to unpack on incompatible system - Identifies input files, which can be replaced ('upload' operation) - Identifies output files, which can be retrieved ('download' operation) - New command-line interface for unpackers, with setup/run/destroy; you can now do everything through reprounzip - Vagrant now defaults to --use-chroot, added --no-use-chroot - Adds --summary and --missing to installpkgs - Adds Docker unpacker (no uploading support yet)

Scientific Software - Peer-reviewed - Python
Published by remram44 over 11 years ago

ReproZip - 0.3.2

(reprounzip only)

Bugfixes: - Once busybox was in the local cache, setting it up could crash - 'script.sh' files were not set as executable

Scientific Software - Peer-reviewed - Python
Published by remram44 over 11 years ago

ReproZip - 0.3.1

(reprozip only)

Bugfixes: - Don't crash when packing an experiment that wrote in temporary directories

Scientific Software - Peer-reviewed - Python
Published by remram44 over 11 years ago

ReproZip - 0.3

Bugfixes: - Handles Linux changing thread id to thread leader's on execve() - Correctly handles processes dying from signals (e.g. SEGV) - Fixes case of rt_sigreturn

Features: - Database stores is_directory field - Handles mkdir(), symlink() - Forces pack to have a .rpz extension - Displays a warning when the process uses connect() or accept() - Improved logging - Handles i386 compatibility mode on x8664 - Handles *at() variants of system calls with ATFDCWD

Scientific Software - Peer-reviewed - Python
Published by remram44 over 11 years ago

ReproZip - 0.2.1

Bugfixes: - 'pack' no longer stop if a file is missing - Do not attempt to pack files from /proc or /dev - Stops vagrant without --use-chroot from overwriting files - Downloads busybox instead of using the host's /bin/sh - Correctly packs the dynamic linkers from the original machine - The tracer no longer considers execve() to always happen before other accesses - Fixes pytracer forking the Python process if the executable cannot be found - Improves signal handling (but bugs might still exist with SIGSTOP) - Fixes a bug if a process resumed before its creator (race condition)

Features: - -v flag also controls C tracer's verbosity - Detects (but doesn't handle yet) i386 compatibility and x32 mode on x86_64 - Stores working directories and exit codes of all processes in database - Added reprozip reset [-d dir] to reset the configuration file from the database

Scientific Software - Peer-reviewed - Python
Published by remram44 over 11 years ago

ReproZip - 0.2

First release

The old reprozip had a 0.1 version on PyPI, so we start straight at 0.2.

Basic functionality is here. Probably needs more testing, however it is useful for us to have this on PyPI.

Scientific Software - Peer-reviewed - Python
Published by remram44 over 11 years ago