openbf

1D blood flow simulator

https://github.com/insigneo/openbf

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
    Found 6 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (1.9%) to scientific vocabulary

Keywords

1d-model cardiovascular finite-volume julia-language simulation
Last synced: 7 months ago · JSON representation ·

Repository

1D blood flow simulator

Basic Info
Statistics
  • Stars: 41
  • Watchers: 4
  • Forks: 18
  • Open Issues: 14
  • Releases: 27
Topics
1d-model cardiovascular finite-volume julia-language simulation
Created almost 9 years ago · Last pushed about 1 year ago
Metadata Files
Readme Contributing License Citation

README.md

openBF.jl

TUoS INSIGNEO CompBioMed

License Mentioned in Awesome Julia.jl

DOI

openbf ci status

chat

openBF

openBF is an open-source 1D blood flow solver based on MUSCL finite-volume numerical scheme, written in Julia and released under Apache 2.0 free software license.

Read the documentation for installation and run instructions.

Release notes

v2.0.0

This is a complete re-write of openBF solver with several bugfixes and few new functionalities. Config files should be backward compatible but please refer to the new documentation for more details.

Currently not supported: - multiple inlets

If your workflow relies on this feature, we recommend to use release v1.5.1.


Citation

@article{Benemerito_2024, doi = {10.1088/1361-6579/ad9663}, url = {https://dx.doi.org/10.1088/1361-6579/ad9663}, year = {2024}, month = {dec}, publisher = {IOP Publishing}, volume = {45}, number = {12}, pages = {125002}, author = {I Benemerito and A Melis and A Wehenkel and A Marzo}, title = {openBF: an open-source finite volume 1D blood flow solver}, journal = {Physiological Measurement} }

Owner

  • Name: INSIGNEO
  • Login: INSIGNEO
  • Kind: organization
  • Email: info@insigneo.org
  • Location: Sheffield

Insigneo: Institute for in silico medicine, Sheffield UK

Citation (CITATION.bib)

@article{Benemerito_2024,
doi = {10.1088/1361-6579/ad9663},
url = {https://dx.doi.org/10.1088/1361-6579/ad9663},
year = {2024},
month = {dec},
publisher = {IOP Publishing},
volume = {45},
number = {12},
pages = {125002},
author = {I Benemerito and A Melis and A Wehenkel and A Marzo},
title = {openBF: an open-source finite volume 1D blood flow solver},
journal = {Physiological Measurement}
}

GitHub Events

Total
  • Issues event: 2
  • Watch event: 9
  • Issue comment event: 4
  • Push event: 8
  • Fork event: 2
Last Year
  • Issues event: 2
  • Watch event: 9
  • Issue comment event: 4
  • Push event: 8
  • Fork event: 2

Committers

Last synced: over 1 year ago

All Time
  • Total Commits: 264
  • Total Committers: 2
  • Avg Commits per committer: 132.0
  • Development Distribution Score (DDS): 0.034
Past Year
  • Commits: 29
  • Committers: 2
  • Avg Commits per committer: 14.5
  • Development Distribution Score (DDS): 0.103
Top Committers
Name Email Commits
ale a****s@r****m 255
ibenemerito88 i****o@g****m 9
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 49
  • Total pull requests: 24
  • Average time to close issues: 8 months
  • Average time to close pull requests: about 1 month
  • Total issue authors: 14
  • Total pull request authors: 3
  • Average comments per issue: 2.12
  • Average comments per pull request: 0.33
  • Merged pull requests: 21
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 8
  • Pull requests: 10
  • Average time to close issues: 7 days
  • Average time to close pull requests: 3 days
  • Issue authors: 5
  • Pull request authors: 1
  • Average comments per issue: 1.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • alemelis (27)
  • fsmMLK (4)
  • ChrisRackauckas (4)
  • YaowenDong (3)
  • ibenemerito88 (2)
  • AWehenkel (2)
  • AhmdG (1)
  • giri-w (1)
  • nikishe (1)
  • pvpnarao (1)
  • poentino87 (1)
  • filippotos (1)
  • tartarini (1)
  • Qhan-Hu (1)
  • willfurnass (1)
Pull Request Authors
  • alemelis (19)
  • ibenemerito88 (2)
  • AWehenkel (1)
Top Labels
Issue Labels
new feature (14) enhancement (11) bug (10) help wanted (2) network check (2) Docs (2) question (1)
Pull Request Labels
enhancement (8) new feature (4) Docs (3) bug (2) optimisation (2)

Dependencies

.github/workflows/ci.yml actions
  • actions/checkout v2 composite
  • julia-actions/julia-buildpkg v1 composite
  • julia-actions/julia-runtest v1 composite
  • julia-actions/setup-julia v1 composite