Recent Releases of NCBITaxonomy
NCBITaxonomy - v0.4.1
NCBITaxonomy v0.4.1
Merged pull requests: - Additional tests on distance matrix (#56) (@tpoisot)
- Julia
Published by tpoisot over 3 years ago
NCBITaxonomy - v0.4.0
NCBITaxonomy v0.4.0
Closed issues: - [out there] processing taxon identifiers via NLP (#44) - Issue with lowercase search conflicting with vernaculars (#49)
Merged pull requests: - Add onlysynonyms and rank to similarnames (#51) (@tpoisot) - Replace lineage functions by AbstractTrees interface (#52) (@tpoisot) - Update the documentation (#53) (@tpoisot) - CompatHelper: add new compat entry for AbstractTrees at version 0.4, (keep existing compat) (#54) (@github-actions[bot])
- Julia
Published by tpoisot over 3 years ago
NCBITaxonomy - v0.2.2
NCBITaxonomy v0.2.2
Closed issues: - Return the nearest names (#20) - Function to disambiguate names (#43)
Merged pull requests: - Add a function to get the nearest names (#42) (@tpoisot)
- Julia
Published by tpoisot almost 5 years ago
NCBITaxonomy - v0.2.1
NCBITaxonomy v0.2.1
Closed issues: - Taxonomic tree (#32) - > 50% of queries are returning NA; and, separately, exact matches aren't returning where appropriate (#36) - pathogen.jl extended to also return species ranks where different than matched names (#37) - In-part names only return the first element (#39)
Merged pull requests: - CompatHelper: bump compat for "DataFrames" to "1.0" (#35) (@github-actions[bot]) - In-part / non-unique names (#40) (@tpoisot) - Doc/hotfix (#41) (@tpoisot)
- Julia
Published by tpoisot almost 5 years ago
NCBITaxonomy - v0.1.0
NCBITaxonomy v0.1.0
Closed issues: - Use Scratch.jl (#27) - Use Preferences.jl to store a single taxo db (#31) - Use a central location for the taxonomy and default to PKG if not set (#33)
- Julia
Published by tpoisot about 5 years ago
NCBITaxonomy - v0.0.8
NCBITaxonomy v0.0.8
Closed issues: - New divisions (#29)
- Julia
Published by tpoisot over 5 years ago
NCBITaxonomy - v0.0.7
NCBITaxonomy v0.0.7
Merged pull requests: - Improve synonyms functions (#28) (@tpoisot)
- Julia
Published by tpoisot over 5 years ago
NCBITaxonomy - v0.0.6
NCBITaxonomy v0.0.6
Merged pull requests: - ✨ vernacular names (#26) (@tpoisot)
- Julia
Published by tpoisot over 5 years ago
NCBITaxonomy - v0.0.5
NCBITaxonomy v0.0.5
Closed issues: - Add a freshness parameter (#23)
Merged pull requests: - Add a freshness parameter (#24) (@tpoisot)
- Julia
Published by tpoisot over 5 years ago
NCBITaxonomy - v0.0.4
NCBITaxonomy v0.0.4
Closed issues: - Allow arbitrary distance function (#19) - Standard namefinders (#21)
Merged pull requests: - Add standard namefinders (#22) (@tpoisot)
- Julia
Published by tpoisot over 5 years ago
NCBITaxonomy - v0.0.2
NCBITaxonomy v0.0.2
Closed issues: - Create a namefinder from a list of IDs (#15)
Merged pull requests: - Next version (#14) (@tpoisot) - CompatHelper: bump compat for "Arrow" to "1.0" (#17) (@github-actions[bot]) - Closes #15 (#18) (@tpoisot)
- Julia
Published by github-actions[bot] over 5 years ago
NCBITaxonomy - v0.0.1
NCBITaxonomy v0.0.1
Closed issues: - The unique name title is not populated when reading to the names.arrow file (#1)
Merged pull requests: - CompatHelper: add new compat entry for "DataFrames" at version "0.21" (#2) (@github-actions[bot]) - CompatHelper: add new compat entry for "Tar" at version "1.8" (#3) (@github-actions[bot]) - CompatHelper: add new compat entry for "StringDistances" at version "0.10" (#4) (@github-actions[bot]) - CompatHelper: add new compat entry for "GZip" at version "0.5" (#5) (@github-actions[bot]) - CompatHelper: add new compat entry for "Arrow" at version "0.4" (#6) (@github-actions[bot]) - CompatHelper: add new compat entry for "MD5" at version "0.2" (#7) (@github-actions[bot]) - CompatHelper: bump compat for "DataFrames" to "0.22" (#8) (@github-actions[bot]) - CompatHelper: add new compat entry for "Tar" at version "1.8" (#9) (@github-actions[bot])
- Julia
Published by github-actions[bot] over 5 years ago