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phys2denoise

A toolbox and collection of scripts to prepare physiology data for fMRI denoise

https://github.com/physiopy/phys2denoise

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 10 committers (10.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.3%) to scientific vocabulary

Keywords

closember fmri hacktoberfest neuroimaging physiological-signals physiology

Keywords from Contributors

brain-imaging
Last synced: 6 months ago · JSON representation

Repository

A toolbox and collection of scripts to prepare physiology data for fMRI denoise

Basic Info
Statistics
  • Stars: 9
  • Watchers: 4
  • Forks: 19
  • Open Issues: 29
  • Releases: 6
Topics
closember fmri hacktoberfest neuroimaging physiological-signals physiology
Created almost 6 years ago · Last pushed 8 months ago
Metadata Files
Readme Changelog License Zenodo

README.md

<!-- physiopy -->

phys2denoise

Join the chat at Gitter: https://gitter.im/physiopy/phys2denoise codecov

CircleCI Build Status. Windows <!--See the documentation at: https://phys2denoise.readthedocs.io--> Requirements Status

The project is currently under development. Any suggestion/bug report is welcome! Feel free to open an issue.

This project follows the all-contributors specification. Contributions of any kind welcome!

Contributors ✨

Thanks goes to these wonderful people (emoji key):

Cesar Caballero Gaudes
Cesar Caballero Gaudes
💻 🤔		 Inés Chavarría
Inés Chavarría
🚇		 Raphaël Fournier
Raphaël Fournier
💻 📓 📖		 George Kikas
George Kikas
💻 🤔 🚇 🐛 ⚠️ 👀		 Tomas Lenc
Tomas Lenc
🐛 ⚠️		 rzlim08
rzlim08
💻 ⚠️		 Ross Markello
Ross Markello
🚇 🧑‍🏫		 m-miedema
m-miedema
👀 🧑‍🏫
Stefano Moia
Stefano Moia
🔣 🚇 📆 💻 🤔 📖 🧑‍🏫		 Alice Patin
Alice Patin
💻		 Marie-Eve Picard
Marie-Eve Picard
👀 🚇		 Taylor Salo
Taylor Salo
💻 🤔 👀		 Rachael Stickland
Rachael Stickland
🚇 📖		 Kristina Zvolanek
Kristina Zvolanek
🚇 👀 📓

License

Copyright 2019, The phys2denoise community.

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

Owner

  • Name: The physiopy community
  • Login: physiopy
  • Kind: organization
  • Email: s.moia.research@gmail.com

A set of tools to operate physiological files in MRI setups

GitHub Events

Total
  • Watch event: 1
  • Delete event: 1
  • Issue comment event: 2
  • Push event: 8
  • Pull request event: 1
  • Pull request review event: 6
  • Pull request review comment event: 7
  • Create event: 1
Last Year
  • Watch event: 1
  • Delete event: 1
  • Issue comment event: 2
  • Push event: 8
  • Pull request event: 1
  • Pull request review event: 6
  • Pull request review comment event: 7
  • Create event: 1

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 166
  • Total Committers: 10
  • Avg Commits per committer: 16.6
  • Development Distribution Score (DDS): 0.663
Past Year
  • Commits: 80
  • Committers: 6
  • Avg Commits per committer: 13.333
  • Development Distribution Score (DDS): 0.375
Top Committers
Name Email Commits
Stefano Moia s****a@b****u 56
smoia s****h@g****m 50
Taylor Salo t****6@f****u 18
Ryan Lim r****8@g****m 11
Fournier Raphaël r****x@h****m 8
Kristina Zvolanek 5****k 8
Inés Chavarría 7****h 6
Tomas Lenc t****c@g****m 4
pre-commit-ci[bot] 6****] 3
CesarCaballeroGaudes c****o@b****u 2
Committer Domains (Top 20 + Academic)
bcbl.eu: 2 fiu.edu: 1

Issues and Pull Requests

Last synced: 7 months ago

All Time
  • Total issues: 33
  • Total pull requests: 33
  • Average time to close issues: 6 months
  • Average time to close pull requests: 4 months
  • Total issue authors: 10
  • Total pull request authors: 13
  • Average comments per issue: 1.12
  • Average comments per pull request: 3.24
  • Merged pull requests: 22
  • Bot issues: 0
  • Bot pull requests: 4
Past Year
  • Issues: 5
  • Pull requests: 7
  • Average time to close issues: 9 minutes
  • Average time to close pull requests: 6 days
  • Issue authors: 3
  • Pull request authors: 4
  • Average comments per issue: 0.0
  • Average comments per pull request: 4.57
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 1
View more stats
Top Authors
Issue Authors
  • tsalo (12)
  • smoia (11)
  • m-miedema (2)
  • maestroque (2)
  • me-pic (2)
  • jdkent (1)
  • eurunuela (1)
  • rzlim08 (1)
  • RayStick (1)
  • erwinschrodinger1 (1)
Pull Request Authors
  • maestroque (9)
  • smoia (8)
  • tsalo (6)
  • pre-commit-ci[bot] (5)
  • me-pic (5)
  • RayStick (3)
  • erwinschrodinger1 (2)
  • TomasLenc (2)
  • kristinazvolanek (1)
  • eurunuela (1)
  • CesarCaballeroGaudes (1)
  • rzlim08 (1)
  • ineschh (1)
Top Labels
Issue Labels
Enhancement (14) Discussion (5) Community (4) Bug (4) Good first issue (2) Outreach (2) Documentation (2) Internal (2) Urgent (1)
Pull Request Labels
Internal (20) Minormod-breaking (9) Testing (7) Documentation (6) Minormod (5) released (4) Hacktoberfest (1) Refactoring (1) BugFIX (1) Enhancement (1) Duplicate (1)

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 7 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 4
  • Total maintainers: 1
pypi.org: phys2denoise

A collection of scripts to prepare physiological data for fMRI denoising

  • Versions: 4
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 7 Last month
Rankings
Forks count: 9.3%
Dependent packages count: 10.1%
Stargazers count: 17.7%
Average: 18.6%
Dependent repos count: 21.5%
Downloads: 34.4%
Maintainers (1)
smoia
Last synced: 7 months ago

Dependencies

requirements.txt pypi
  • matplotlib >=3.1.1
  • numpy >=1.9.3
.github/workflows/auto-release.yml actions
  • actions/checkout v2 composite
.github/workflows/pythonpublish.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v1 composite