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deepsearch-toolkit

Interact with the Deep Search platform for new knowledge explorations and discoveries

https://github.com/ds4sd/deepsearch-toolkit

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 16 committers (6.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (14.0%) to scientific vocabulary

Keywords

accelerated-discovery deepsearch knowledge-extraction knowledge-graph nlp pdf-converter python rag semantic-retrieval

Keywords from Contributors

cmmd ct fuse fuse-med-ml fusemedml healthcare isic knight-challenge medical medical-imaging
Last synced: 6 months ago · JSON representation ·

Repository

Interact with the Deep Search platform for new knowledge explorations and discoveries

Basic Info
Statistics
  • Stars: 203
  • Watchers: 4
  • Forks: 27
  • Open Issues: 22
  • Releases: 72
Topics
accelerated-discovery deepsearch knowledge-extraction knowledge-graph nlp pdf-converter python rag semantic-retrieval
Created over 3 years ago · Last pushed about 1 year ago
Metadata Files
Readme Changelog Contributing License Code of conduct Citation

README.md

Deep Search Toolkit

PyPI version PyPI - Python Version License MIT Code style: black Docs Downloads

Interact with the Deep Search platform for new knowledge explorations and discoveries

The Deep Search Toolkit is a Python SDK and CLI allowing users to interact with the Deep Search platform. The Toolkit provides easy-to-use features for several common document workflows such as conversion, graph creation, and querying, including semantic retrieval and RAG.

Quick links

Install

shell pip install deepsearch-toolkit

Getting started

Check out Getting started.

Get help and support

Please feel free to connect with us using the discussion section.

Contributing

Please read Contributing to Deep Search Toolkit for details.

References

If you use Deep Search in your projects, please consider citing the following:

bib @software{Deep Search Toolkit, author = {Deep Search Team}, month = {6}, title = {{Deep Search Toolkit}}, url = {https://github.com/DS4SD/deepsearch-toolkit}, version = {main}, year = {2022} }

License

The Deep Search Toolkit codebase is under MIT license. For individual model usage, please refer to the model licenses found in the original packages.

Owner

  • Name: DeepSearch 4 (Scientific) Discovery
  • Login: DS4SD
  • Kind: organization
  • Email: deepsearch-core@zurich.ibm.com

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use the DeepSearch Toolkit, please consider citing as below."
authors:
  - family-names: Team
    given-names: DeepSearch
title: "DeepSearch Toolkit"
version: 1.0.0
url: "https://github.com/DS4SD/deepsearch-toolkit"
# doi: TBD
date-released: 2022-06-15

GitHub Events

Total
  • Issues event: 3
  • Watch event: 74
  • Delete event: 3
  • Issue comment event: 20
  • Push event: 8
  • Pull request review comment event: 1
  • Pull request review event: 8
  • Pull request event: 14
  • Fork event: 10
  • Create event: 4
Last Year
  • Issues event: 3
  • Watch event: 74
  • Delete event: 3
  • Issue comment event: 20
  • Push event: 8
  • Pull request review comment event: 1
  • Pull request review event: 8
  • Pull request event: 14
  • Fork event: 10
  • Create event: 4

Committers

Last synced: 9 months ago

All Time
  • Total Commits: 309
  • Total Committers: 16
  • Avg Commits per committer: 19.313
  • Development Distribution Score (DDS): 0.686
Past Year
  • Commits: 25
  • Committers: 6
  • Avg Commits per committer: 4.167
  • Development Distribution Score (DDS): 0.6
Top Committers
Name Email Commits
Lokesh Mishra e****a@g****m 97
github-actions[bot] g****] 65
Michele Dolfi 9****m 50
Panos Vagenas 3****s 50
cau-git 6****t 19
Tiago Santana 5****o 9
Miguel.brandao 3****l 5
agiova g****a@o****m 2
DKL d****l@z****m 2
imgbot[bot] 3****] 2
Peter W. J. Staar 9****M 2
Cesar Berrospi Ramis 7****m 2
Yusik Kim 1****k 1
Karl Wehden K****l@W****m 1
ImgBotApp I****p@g****m 1
Daniel Blankenberg d****g@g****m 1
Committer Domains (Top 20 + Academic)
wehden.com: 1 zurich.ibm.com: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 24
  • Total pull requests: 168
  • Average time to close issues: about 1 month
  • Average time to close pull requests: 9 days
  • Total issue authors: 14
  • Total pull request authors: 15
  • Average comments per issue: 0.88
  • Average comments per pull request: 0.2
  • Merged pull requests: 135
  • Bot issues: 0
  • Bot pull requests: 3
Past Year
  • Issues: 3
  • Pull requests: 12
  • Average time to close issues: N/A
  • Average time to close pull requests: 7 days
  • Issue authors: 3
  • Pull request authors: 4
  • Average comments per issue: 0.33
  • Average comments per pull request: 0.67
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • dolfim-ibm (4)
  • wilsoncharles (3)
  • vagenas (3)
  • SwamiPatil (3)
  • jeromemassot (2)
  • DanielHabenicht (1)
  • Maxlo24 (1)
  • marcoaleixo (1)
  • Mindihap (1)
  • ds-mathias (1)
  • agiova (1)
  • davidberenstein1957 (1)
  • timurcarstensen (1)
  • kuopching (1)
  • davidpt (1)
Pull Request Authors
  • vagenas (66)
  • dolfim-ibm (40)
  • HolyMichael (21)
  • SantanaTiago (17)
  • cau-git (17)
  • exomishra (13)
  • imgbot[bot] (4)
  • kdinkla (4)
  • ceberam (4)
  • PeterStaar-IBM (4)
  • kmyusk (2)
  • agiova (1)
  • marcoaleixo (1)
  • kwehden (1)
  • blankenberg (1)
Top Labels
Issue Labels
enhancement (5) documentation (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 3,832 last-month
  • Total docker downloads: 74
  • Total dependent packages: 2
  • Total dependent repositories: 1
  • Total versions: 73
  • Total maintainers: 1
pypi.org: deepsearch-toolkit

Interact with the Deep Search platform for new knowledge explorations and discoveries

  • Versions: 73
  • Dependent Packages: 2
  • Dependent Repositories: 1
  • Downloads: 3,832 Last month
  • Docker Downloads: 74
Rankings
Docker downloads count: 3.1%
Dependent packages count: 3.2%
Downloads: 6.7%
Stargazers count: 7.3%
Average: 8.5%
Forks count: 9.3%
Dependent repos count: 21.5%
Maintainers (1)
ibm-deepsearch-core
Last synced: 6 months ago

Dependencies

poetry.lock pypi
  • 138 dependencies
pyproject.toml pypi
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  • mypy ^0.931 develop
  • pre-commit ^2.17.0 develop
  • pylint ^2.12.2 develop
  • pytest ^7.0.1 develop
  • types-requests ^2.27.10 develop
  • types-tabulate ^0.8.5 develop
  • appdirs ^1.4.4
  • certifi ^2021.10.8
  • ipython-blocking ^0.3.1
  • ipywidgets ^7.6.5
  • jupyter ^1.0.0
  • numpy ^1.22.4
  • pandas ^1.4.2
  • pluggy ^1.0.0
  • pydantic ^1.9.0
  • python ^3.8
  • python-dateutil ^2.8.2
  • python-jose ^3.3.0
  • requests ^2.27.1
  • six ^1.16.0
  • tabulate ^0.8.9
  • tqdm ^4.64.0
  • tqdm-stubs ^0.2.0
  • typer ^0.4.0
  • urllib3 ^1.26.8
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