pride-resources
PRIDE Resources Forum (https://github.com/PRIDE-Archive/pride-resources/discussions)
Science Score: 52.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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✓Institutional organization owner
Organization pride-archive has institutional domain (www.ebi.ac.uk) -
○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.8%) to scientific vocabulary
Keywords
Repository
PRIDE Resources Forum (https://github.com/PRIDE-Archive/pride-resources/discussions)
Basic Info
Statistics
- Stars: 1
- Watchers: 5
- Forks: 1
- Open Issues: 0
- Releases: 1
Topics
Metadata Files
README.md
PRIDE Resources
Since 2004, the PRoteomics IDEntifications (PRIDE) database (https://www.ebi.ac.uk/pride/) at the European Bioinformatics Institute (EMBL-EBI, Hinxton, Cambridge, UK) has enabled public data deposition of mass spectrometry (MS)-based proteomics data, providing access to the experimental data described in scientific publications. Since then, and especially in recent years, PRIDE Archive (the archival component of PRIDE) has become the largest repository for proteomics data sharing worldwide.
PRIDE stores datasets coming from all MS-based proteomics experimental approaches, with a focus on discovery-driven techniques such as data-dependent acquisition (DDA) and data independent acquisition (DIA) bottom-up proteomics, but also top-down proteomics and MS imaging, among others. Main Resources:
- PRIDE Archive: PRIDE Archive stores all PRIDE Datasets
- PRIDE (PX) Submission Tool: Enables Submissions of datasets to PRIDE Archive
- PRIDE Archive Restful API: Programmatically access to PRIDE Archive data.
This repository stores PRIDE guidelines on how to submit data, formats for PRIDE Archive, PRIDE Affinity Proteomics Archive PRIDE-AP and PRIDE Crosslinking resource.
In addition, this GitHub repository helps users of PRIDE Resources to interact with PRIDE Team using the PRIDE Resources Forum: https://github.com/PRIDE-Archive/pride-resources/discussions
Owner
- Name: PRIDE-Resources
- Login: PRIDE-Archive
- Kind: organization
- Email: pride-support@ebi.ac.uk
- Website: http://www.ebi.ac.uk/pride/
- Twitter: pride_ebi
- Repositories: 84
- Profile: https://github.com/PRIDE-Archive
PRIDE: Proteomics resources
Citation (CITATION.cff)
cff-version: 1.1.0 message: "If you use this software, please cite it as below." authors: - family-names: Joe given-names: Johnson orcid: https://orcid.org/0000-0000-0000-0000 title:PRIDE-Archive/pride-resources: v1.0.0 - First release of pride affinity proteomics submission guidelines version: v1.0.0 date-released: 2025-03-27
GitHub Events
Total
- Release event: 1
- Delete event: 3
- Issue comment event: 23
- Push event: 42
- Pull request review comment event: 17
- Pull request review event: 33
- Pull request event: 36
- Fork event: 1
- Create event: 5
Last Year
- Release event: 1
- Delete event: 3
- Issue comment event: 23
- Push event: 42
- Pull request review comment event: 17
- Pull request review event: 33
- Pull request event: 36
- Fork event: 1
- Create event: 5
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 0
- Total pull requests: 16
- Average time to close issues: N/A
- Average time to close pull requests: 2 days
- Total issue authors: 0
- Total pull request authors: 3
- Average comments per issue: 0
- Average comments per pull request: 1.25
- Merged pull requests: 8
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 16
- Average time to close issues: N/A
- Average time to close pull requests: 2 days
- Issue authors: 0
- Pull request authors: 3
- Average comments per issue: 0
- Average comments per pull request: 1.25
- Merged pull requests: 8
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- shengbokw (2)
- ypriverol (1)
Pull Request Authors
- ypriverol (10)
- deeptijk (7)
- javizca (1)
- selvaebi (1)