markovian_closure_fermions
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Repository
Basic Info
- Host: GitHub
- Owner: phaerrax
- License: gpl-3.0
- Language: Julia
- Default Branch: main
- Size: 891 KB
Statistics
- Stars: 2
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
Fermionic Markovian closure
This repository contains the code used for the simulations in [1]. There are some scripts computing the evolution of several types of physical systems, employing the Markovian closure technique as explained in the article.
Installation
1) Clone the repository on your computer.
2) This project depends on some packages that aren't found in Julia's general
registry, but in this one,
so you need to add it first in order to download those packages
automatically (you can skip this step if you already added the registry
previously: you need to do it just once per Julia installation). Open a
Julia interactive session and enter the Pkg REPL by hitting ] (see the
Getting Started with Environments
guide) and then run registry add https://github.com/phaerrax/TensorNetworkSimulations.git:
```julia-repl
(@v1.11) pkg> registry add https://github.com/phaerrax/TensorNetworkSimulations.git
Cloning registry from "https://github.com/phaerrax/TensorNetworkSimulations.git"
Added registry `TensorNetworkSimulations` to `~/.julia/registries/TensorNetworkSimulations`
```
(If this is the first time using Julia then run `registry add General` too
otherwise the `General` registry won't be automatically added.)
3) Activate the Julia project in this folder with activate .
```julia-repl
(@v1.11) pkg> activate .
Activating project at `~/markovian_closure_fermions`
```
4) Add the OpenSystemsChainMapping package and download all the
dependencies by running dev ./OpenSystemsChainMapping and then
instantiate.
Description of the repository
The repository contains a package, called OpenSystemsChainMapping, which
defines some "core" functions that allow simulating some open quantum systems
in contact with one or two environments.
You will find:
- some Julia scripts which perform the simulation of some physical models such
as the SIAM (
siam) or a quantum dot impurity (qdot), either using a standard TEDOPA method (pure….jl) or the Markovian closure (mc….jl); - an
examplefolder which contains the parameter files of some concrete simulations, as well as some frequently used spectral densities. - some Julia scripts that calculate the chain coefficients, in several ways,
starting from the data of a spectral density (
chainmapping_….jl);
How it works (WIP)
The parameters for each simulation script must be supplied, in a JSON file, as
the first (and only) command-line argument. You can find some examples in the
test/spectral_densities directory. Please note that the script that computes
the thermofield coefficients currently works only if the chemical potential is
zero (this does not affect the generality of our algorithms, since any spectral
density can always be shifted so that its chemical potential is zero), so for
now care must be taken to write the parameter files according to this
specification. All files in test/spectral_densities already follow this
convention.
In order to run a simulation script, run from the base folder (i.e. the root
of the Git repository)
bash
julia --project <script.jl> <parameter_file.json>
using the full relative paths of the files, e.g.
bash
julia --project siam/spinless/mc.jl test/siam/spinless/mu1/NE8/mc60_NC6.json
Example
Here is an example of a complete workflow, starting from scratch.
We want to simulate a spinless SIAM with some given parameter files:
test/spectral_densities_semicircle_T4_mu0.5.json representing a semicircle
spectral density, and examples/siam_mc.jl with the parameters for the
physical simulation of the model with a Markovian closure.
- Generate the thermofield coefficients from the spectral density, with
bash
julia --project chainmapping_thermofield.jl examples/spectral_densities/semicircle_T4_mu0.5.json
The output is a file called
test/spectral_densities/semicircle_T4_mu0.5.thermofield, which will be called
later in examples/siam_mc.json in the chain_coefficients entry.
It is not necessary to generate the coefficient each time, if the file already
exists.
2. Run the simulation script with
bash
julia --project siam/spinless/mc.jl examples/siam_spinless_mc.json
Note that the parameter file examples/siam_mc.json also specifies some
output files which will contain the expectation values of the given
observables, an HDF5 file containing the final state, and so on.
If one does not need such results, /dev/null or an equivalent destination
may be given to avoid creating unnecessary output files.
The examples directory contains other sample parameter files that can be
used with other simulation scripts:
bash
julia --project siam/spinless/pure.jl examples/siam_spinless_pure.json
julia --project siam/spinful/mc.jl examples/siam_spinful_mc.json
julia --project qdot/mc_2l.jl examples/qdot_2levels_mc.json
Common parameters and their meaning
Chain coefficients:
chain_coefficients: a file containing the chain coefficientschain_length: an integer specifying how many sites to keep in the environment chains before attaching the closure
Output files:
out_file: expectation values of observablesstate_file: final MPS (in HDF5 format)ranks_file: bond dimensions of the MPS, step by steptimes_file: wall-clock time needed for each evolution step
Integration parameters for the simulation:
tmax: final (physical) time of the simulationtstep: integration time stepms_stride: measure observables only eachms_stridestepsmax_bond: maximum bond dimension for the MPSdiscarded_w: cutoff for MPS truncation during the evolution
Observables:
observables: a vector specifying the name of the observable (a valid ITensor operator) and a list of sites on which it will be measured, e.g.json { "vN": [1,2,3,10,11,16,17], "vX": [1,2,3,4] }
(note that the
vprefix here is used for the "vectorized fermion" systems --- please consult theLindbladVectorizedTensorspackage documentation for more information)Markovian closure parameters:
MC_alphas:mc_standard_parameters/alphas_6.dat,MC_betas:mc_standard_parameters/betas_6.dat,MC_coups:mc_standard_parameters/coupls_6.dat
These are already existing files. You only need to change the number in the file name from 6 to 8 or 10 if you want to use closures with a different number of modes.
Other system-specific parameters, e.g. when the open system is a two-level system (a fermion, maybe) we need:
sys_en: energy of the open systemsys_ini: initial state of the open system
References
[1] Ferracin, D., Smirne, A., Huelga, S. F., Plenio M. B. and Tamascelli, D. (2024). Spectral Density Modulation and Universal Markovian Closure of Fermionic Environments. arxiv.org/abs/2407.10017.
Owner
- Name: Davide Ferracin
- Login: phaerrax
- Kind: user
- Location: Milano, Italy
- Repositories: 4
- Profile: https://github.com/phaerrax
Citation (CITATION.cff)
cff-version: 1.2.0
title: markovian_closure_fermions
message: >-
If you use this software, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Davide
family-names: Ferracin
email: davide.ferracin@unimi.it
affiliation: Università degli Studi di Milano
orcid: 'https://orcid.org/0009-0007-2980-4677'
- given-names: Dario
family-names: Tamascelli
email: dario.tamascelli@unimi.it
affiliation: Università degli Studi di Milano
orcid: 'https://orcid.org/0000-0001-6575-4469'
repository-code: 'https://github.com/phaerrax/markovian_closure_fermions'
license: GPL-3.0-or-later
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