mbon_data_workshop_2025
This workshop aims to provide MBON teams with practical tools and expert guidance for mobilizing their biological data into OBIS.
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (14.3%) to scientific vocabulary
Repository
This workshop aims to provide MBON teams with practical tools and expert guidance for mobilizing their biological data into OBIS.
Basic Info
- Host: GitHub
- Owner: ioos
- License: other
- Language: Python
- Default Branch: main
- Homepage: https://ioos.github.io/mbon_data_workshop_2025/
- Size: 17.2 MB
Statistics
- Stars: 0
- Watchers: 9
- Forks: 1
- Open Issues: 10
- Releases: 0
Metadata Files
README.md
The Carpentries Workbench Template Markdown Lesson
This lesson is a template lesson that uses The Carpentries Workbench.
Note about lesson life cycle stage
Although the config.yaml states the life cycle stage as pre-alpha, the template is stable and ready to use. The life cycle stage is preset to "pre-alpha" as this setting is appropriate for new lessons initialised using the template.
Create a new repository from this template
To use this template to start a new lesson repository,
make sure you're logged into Github.
Visit https://github.com/carpentries/workbench-template-md/generate
and follow the instructions.
Checking the 'Include all branches' option will save some time waiting for the first website build
when your new repository is initialised.
If you have any questions, contact @tobyhodges
Configure a new lesson
Follow the steps below to complete the initial configuration of a new lesson repository built from this template:
- Make sure GitHub Pages is activated:
navigate to Settings,
select Pages from the left sidebar,
and make sure that
gh-pagesis selected as the branch to build from. If nogh-pagesbranch is available, check Actions to see if the first website build workflows are still running. The branch should become available when those have completed. - Adjust the
config.yamlfile: this file contains global parameters for your lesson site. Individual fields within the file are documented with comments (beginning with#) At minimum, you should adjust all the fields marked 'FIXME':titlecreatedkeywordslife_cycle(the default, pre-alpha, is the appropriate for brand new lessons)contact
- Annotate the repository with site URL and topic tags:
navigate back to the repository landing page and
click on the gear wheel/cog icon (similar to ⚙️)
at the top-right of the About box.
Check the "Use your GitHub Pages website" option,
and add some keywords and other annotations to describe your lesson
in the Topics field.
At minimum, these should include:
lesson- the life cycle of the lesson (e.g.
pre-alpha) - the human language the lesson is written in (e.g.
deutsch)
- Adjust the
CITATION.cff,CODE_OF_CONDUCT.md,CONTRIBUTING.md, andLICENSE.mdfiles as appropriate for your project.-
CITATION.cff: this file contains information that people can use to cite your lesson, for example if they publish their own work based on it. You should update the CFF now to include information about your lesson, and remember to return to it periodicallt, keeping it updated as your author list grows and other details become available or need to change. The Citation File Format home page gives more information about the format, and thecffinitwebtool can be used to create new and update existing CFF files. -
CODE_OF_CONDUCT.md: if you are using this template for a project outside The Carpentries, you should adjust this file to describe who should be contacted with Code of Conduct reports, and how those reports will be handled. -
CONTRIBUTING.md: depending on the current state and maturity of your project, the contents of the template Contributing Guide may not be appropriate. You should adjust the file to help guide contributors on how best to get involved and make an impact on your lesson. -
LICENSE.md: in line with the terms of the CC-BY license, you should ensure that the copyright information provided in the license file is accurate for your project.
-
- Update this README with relevant information about your lesson and delete this section.
Owner
- Name: US Integrated Ocean Observing System
- Login: ioos
- Kind: organization
- Email: data.ioos@noaa.gov
- Location: Silver Spring, MD
- Website: http://ioos.github.io
- Twitter: usioosgov
- Repositories: 123
- Profile: https://github.com/ioos
Software, tools, and technical documentation supporting IOOS Data Management and Cyberinfrastructure (DMAC).
Citation (CITATION.cff)
# This template CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to replace its contents
# with information about your lesson.
# Remember to update this file periodically,
# ensuring that the author list and other fields remain accurate.
cff-version: 1.2.0
title: FIXME
message: >-
Please cite this lesson using the information in this file
when you refer to it in publications, and/or if you
re-use, adapt, or expand on the content in your own
training material.
type: dataset
authors:
- given-names: FIXME
family-names: FIXME
abstract: >-
FIXME Replace this with a short abstract describing the
lesson, e.g. its target audience and main intended
learning objectives.
license: CC-BY-4.0
GitHub Events
Total
- Issues event: 27
- Watch event: 1
- Delete event: 1
- Issue comment event: 33
- Push event: 151
- Pull request review event: 2
- Pull request event: 7
- Fork event: 2
- Create event: 12
Last Year
- Issues event: 27
- Watch event: 1
- Delete event: 1
- Issue comment event: 33
- Push event: 151
- Pull request review event: 2
- Pull request event: 7
- Fork event: 2
- Create event: 12
Issues and Pull Requests
Last synced: 4 months ago
All Time
- Total issues: 17
- Total pull requests: 4
- Average time to close issues: 8 days
- Average time to close pull requests: about 1 hour
- Total issue authors: 8
- Total pull request authors: 3
- Average comments per issue: 0.41
- Average comments per pull request: 0.75
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 17
- Pull requests: 4
- Average time to close issues: 8 days
- Average time to close pull requests: about 1 hour
- Issue authors: 8
- Pull request authors: 3
- Average comments per issue: 0.41
- Average comments per pull request: 0.75
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- MathewBiddle (10)
- JamesMichaelPrice (1)
- sea-scope (1)
- caseymgodwin (1)
- bbest (1)
- jthmiller (1)
- mebowers5 (1)
- aalloilla (1)
Pull Request Authors
- MathewBiddle (2)
- 7yl4r (1)
- laurabrenskelle (1)