UnfoldBIDS - v0.3.3

UnfoldBIDS v0.3.3

Diff since v0.3.2

New function

• adds new function bids_effects() to calculated marginalized effects of all subjects

Bugfix

• fixed a bug in subject extraction

Documentation

• Documentation now contains an example of how to apply preprocessing
• fixes in documentation
• new landing page
• fixes in the ReadMe

Merged pull requests: - Fix readme and docs; add bids_effects (#95) (@ReneSkukies) - new landing page (#96) (@xuyg16) - bugfix subject information loading (#99) (@ReneSkukies)

Closed issues: - we could think to provide a flexible interface to the get_data function, by allowing to specify a NamedTuple which can be used not only to define what channels to use, but also what time etc. (#40) - Documentation (#61) - non-numeric subject (#92)

- Julia
Published by github-actions[bot] 10 months ago

UnfoldBIDS - v0.3.2

UnfoldBIDS v0.3.2

Diff since v0.3.1

Bugfix

• See #93

Documentation

• Documentation now contains an example of how to calculate group averages

Merged pull requests: - Add to docs (#89) (@ReneSkukies) - Update bids layout to look for arbitrary strings (#94) (@ReneSkukies)

Closed issues: - non-numeric subject (#91) - bids_layout only finds sub-XXX files (#93)

- Julia
Published by github-actions[bot] about 1 year ago

UnfoldBIDS - v0.3.1

UnfoldBIDS v0.3.1

Diff since v0.3.0

Major changes

• Updated to use Unfold v0.8
  • Technically this can lead to a breaking change, however all tests completed sucessfully when updating. Please see Unfold.jl release notes for breaking change information on model use.

Merged pull requests: - Update CI.yml (#87) (@behinger)

- Julia
Published by github-actions[bot] about 1 year ago

UnfoldBIDS - v0.3.0

UnfoldBIDS v0.3.0

Diff since v0.2.0

Breaking changes

• Updated to use Unfold v0.7
• rename function UnfoldBIDS.add_latency_from_df to UnfoldBIDS.rename_to_latency according to suggestion in #85
• rename data_df.data to data_df.raw to comply with MNE standard #86
• because of the new Unfold version needed: bugfix when remove_time_expanded_Xs

Major changes

• new Unit testing #59
• documentation overhaul
• implemented better Artifact for testing and documentation

Minor changes

• better docstrings for all functions
• renaming of multiple internal variables
• added doc previews

Merged pull requests: - Implement tests & Doc fixes (#84) (@ReneSkukies)

Closed issues: - [IMPORTANT] Review code-doubling (#50) - Both .eeg and .vhdr in load.jl (#76) - rename addlatencyfrom_df (#85) - rename 'data' to 'raw'? (#86)

- Julia
Published by github-actions[bot] over 1 year ago

UnfoldBIDS - v0.2.0

UnfoldBIDS v0.2.0

Diff since v0.1.0

Major changes

Now allows for savin/ loading Unfold models from resulting DataFrame with: saveresults( ) loadresults( )

Minor changes

• better docstrings for all functions
• bugfix where multiple files from brainvision were detected

Merged pull requests: - I/O of Unfold models (#79) (@ReneSkukies) - Hotfix #1 (#80) (@ReneSkukies) - Update README.md (#82) (@ReneSkukies)

Closed issues: - Layout loads all files if derivative (#43) - warnings only if multi session/tasks found (#45) - loading with paths (#46) - Implement events.latency (#51) - Save/ load results function (#58) - update Readme.md (#81) - Better docstrings (#83)

- Julia
Published by github-actions[bot] over 1 year ago

UnfoldBIDS - v0.1.0

UnfoldBIDS v0.1.0

Merged pull requests: - CompatHelper: add new compat entry for Revise at version 3, (keep existing compat) (#10) (@github-actions[bot]) - CompatHelper: add new compat entry for MixedModels at version 4, (keep existing compat) (#11) (@github-actions[bot]) - CompatHelper: add new compat entry for StatsModels at version 0.6, (keep existing compat) (#12) (@github-actions[bot]) - CompatHelper: add new compat entry for CairoMakie at version 0.7, (keep existing compat) (#13) (@github-actions[bot]) - CompatHelper: add new compat entry for PyMNE at version 0.1, (keep existing compat) (#14) (@github-actions[bot]) - CompatHelper: add new compat entry for CSVFiles at version 1, (keep existing compat) (#15) (@github-actions[bot]) - CompatHelper: add new compat entry for DataFrames at version 1, (keep existing compat) (#16) (@github-actions[bot]) - CompatHelper: add new compat entry for Unfold at version 0.3, (keep existing compat) (#17) (@github-actions[bot]) - CompatHelper: add new compat entry for AlgebraOfGraphics at version 0.6, (keep existing compat) (#18) (@github-actions[bot]) - CompatHelper: add new compat entry for Glob at version 1, (keep existing compat) (#19) (@github-actions[bot]) - CompatHelper: add new compat entry for Revise at version 3, (keep existing compat) (#20) (@github-actions[bot]) - CompatHelper: bump compat for PyMNE to 0.2, (keep existing compat) (#22) (@github-actions[bot]) - CompatHelper: bump compat for CairoMakie to 0.9, (keep existing compat) (#23) (@github-actions[bot]) - init DataDeps (#24) (@behinger) - CompatHelper: add new compat entry for DataDeps at version 0.7, (keep existing compat) (#25) (@github-actions[bot]) - CompatHelper: add new compat entry for ArtifactUtils at version 0.2, (keep existing compat) (#26) (@github-actions[bot]) - CompatHelper: bump compat for StatsModels to 0.7, (keep existing compat) (#27) (@github-actions[bot]) - CompatHelper: bump compat for Unfold to 0.4, (keep existing compat) (#28) (@github-actions[bot]) - CompatHelper: add new compat entry for CairoMakie at version 0.10, (keep existing compat) (#29) (@github-actions[bot]) - CompatHelper: bump compat for Unfold to 0.5, (keep existing compat) (#30) (@github-actions[bot]) - CompatHelper: add new compat entry for DelimitedFiles at version 1, (keep existing compat) (#31) (@github-actions[bot]) - Dev (#32) (@ReneSkukies) - Update used Packages (#33) (@ReneSkukies) - lower-cased a lot of things (#34) (@behinger) - multiFormatString (#36) (@behinger) - CompatHelper: add new compat entry for DataFramesMeta at version 0.14, (keep existing compat) (#37) (@github-actions[bot]) - CompatHelper: add new compat entry for CSV at version 0.10, (keep existing compat) (#38) (@github-actions[bot]) - return models instead of coefs (#39) (@behinger) - CompatHelper: add new compat entry for ProgressBars at version 1, (keep existing compat) (#41) (@github-actions[bot]) - Get dev up to date (#42) (@ReneSkukies) - Allow to specify preprocessing function (#47) (@behinger) - CompatHelper: bump compat for Unfold to 0.6, (keep existing compat) (#53) (@github-actions[bot]) - Better read me (#54) (@ReneSkukies) - Create CITATION.cff (#55) (@vladdez) - added the @all-contributors functionality (#56) (@ReboreExplore) - docs: add behinger as a contributor for bug (#64) (@allcontributors[bot]) - docs: add ReneSkukies as a contributor for review (#65) (@allcontributors[bot]) - docs: add behinger as a contributor for code (#66) (@allcontributors[bot]) - docs: add behinger as a contributor for projectManagement, and ideas (#67) (@allcontributors[bot]) - docs: add ReneSkukies as a contributor for ideas, code, and bug (#68) (@allcontributors[bot]) - Add Documentation (#69) (@ReneSkukies) - add continuables.jl for loading paths (#71) (@ReneSkukies) - Refactor names; add Continuables dependency (#74) (@ReneSkukies)

Closed issues: - match only with sub-003 but not sub-03 (#44) - Implement events loading from .tsv files in BIDS structure as default (#49) - load events from .tsv files into DataFrame (#57) - path loading only works with full BIDS compliance (#70)

- Julia
Published by github-actions[bot] almost 2 years ago