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spectral_density_CB_mesons_2025

https://github.com/telos-collaboration/spectral_density_CB_mesons_2025

Science Score: 67.0%

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    CITATION.cff file
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    .zenodo.json file
    Found .zenodo.json file
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    Found 6 DOI reference(s) in README
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    Links to: zenodo.org
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    Low similarity (12.2%) to scientific vocabulary
Last synced: 9 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: telos-collaboration
  • License: gpl-3.0
  • Language: Python
  • Default Branch: main
  • Size: 219 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Created almost 2 years ago · Last pushed 12 months ago
Metadata Files
Readme License Citation

README.md

Analysis code for (arXiv:2506.19804)

This is the analysis code built on top of lsdensities code ( GitHub repository ) to reproduce the results in (arXiv:2506.19804).

Authors

Niccolò Forzano, Ho Hsiao, Fabian Zierler, Ed Bennett, Luigi Del Debbio, Ryan C. Hill, Deog Ki Hong, Jong-Wan Lee, C.-J. David Lin, Biagio Lucini, Alessandro Lupo, Maurizio Piai, Davide Vadacchino.

Requirements

Setup

  1. Install the dependencies above.
  2. Clone this repository including submodules (or download its Zenodo release and unzip it) and cd into it:

shellsession git clone --recurse-submodules https://github.com/telos-collaboration/spectral_density_CB_mesons_2025 cd spectral_density_CB_mesons_2025

  1. Download the data and metadata from the data release:

    1. Download the file chimera_data_reduced.h5, and place it in the input_correlators directory
    2. Download the file metadata.zip, and unzip it at root level to create the metadata directory.
    3. Download the file raw_data.zip, and unzip it at root level to create the raw_data directory.

Running the workflow

The workflow is run using Snakemake:

shellsession snakemake --cores 1 --use-conda

where the number 1 may be replaced by the number of CPU cores you wish to allocate to the computation (or all to use all available CPU cores).

Snakemake will automatically download and install all required Python and Julia packages. This requires an Internet connection. If you are running in an HPC environment where you would need to run the workflow without Internet access, these may be prepared by running the following commands on a login node with Internet access:

shellsession snakemake --cores 1 --sdm conda --conda-create-envs-only snakemake --cores 1 --use-conda intermediary_data/cb_julia_instantiated

Once this is complete, the remainder of the workflow will run without Internet access.

The full workflow takes around 24 hours to run on a single node of the Sunbird supercomputer, which has 2x Intel(R) Xeon(R) Gold 6148 CPUs @ 2.40GHz with 20 cores each.

Output

Output plots, tables, and definitions are placed in the assets/plots and assets/tables directories.

Output data assets are placed into the data_assets directory.

Intermediary data are placed in a number of other subdirectories, including:

  • intermediary_data
  • lsd_out
  • JSONs
  • CSVs

Reusability

This workflow is relatively tailored to the data which it was originally written to analyse. Extending the analysis by adding more ensembles has not been tested; in addition to adding the relevant raw data and metadata, changes to the workflow definition files (under workflow/) and to the underlying Python code (under src/ and lsd_out/), would be necessary.

Acknowledgment

Portions of this workflow are derived from the workflow for the publication Lattice investigations of the chimera baryon spectrum in the Sp(4) gauge theory.

This workflow builds on other work by members of this collaboration and others, much of which is referenced by Git submodule or by environment specification. This includes:

License

This workflow is shared under the GNU General Public License 3.0.

Owner

  • Name: TELOS Collaboration
  • Login: telos-collaboration
  • Kind: organization

The TELOS Collaboration performs Theoretical Explorations on the Lattice with Orthogonal and Symplectic groups.

Citation (CITATION.cff) 

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
title: >-
  Meson spectroscopy of lattice gauge theories with spectral
  densities—data release
message: >-
  Please cite if you reuse portions of this code to   enable
  your own work.
type: software
authors:
  - given-names: Niccolò
    family-names: Forzano
    email: 2227764@swansea.ac.uk
    affiliation: >-
      Department of Physics, Faculty  of Science and
      Engineering, Swansea University, Singleton Park, SA2
      8PP, Swansea, Wales, UK
    orcid: 'https://orcid.org/0000-0003-0985-8858'
  - given-names: Ryan
    family-names: Hill
    email: ryan.hill@ed.ac.uk
    affiliation: >-
      School of Physics and Astronomy, University of
      Edinburgh, Edinburgh EH9 3FD, United Kingdom
  - given-names: Luigi
    family-names: Del Debbio
    email: luigi.del.debbio@ed.ac.uk
    affiliation: >-
      Higgs Centre for Theoretical Physics, School of
      Physics and Astronomy,  The University of Edinburgh,
      Peter Guthrie Tait Road, Edinburgh EH9 3FD, UK
    orcid: 'https://orcid.org/0000-0003-4246-3305'
  - given-names: Deog
    family-names: Ki Hong
    email: dkhong@pusan.ac.kr
    affiliation: >-
      Department of Physics, Pusan National University,
      Busan 46241, Korea
  - given-names: Jong-Wan
    family-names: Lee
    email: jwlee823@pusan.ac.kr
    affiliation: >-
      Institute for Basic Science (IBS), Daejeon, 34126,
      Korea.
  - given-names: Ho
    family-names: Hsiao
    email: thepaulxiao.sc09@nycu.edu.tw
    affiliation: >-
      Institute of Physics, National Yang Ming Chiao Tung
      University, 1001 Ta-Hsueh Road, Hsinchu 30010, Taiwan
  - given-names: C.-J. David
    family-names: Lin
    email: dlin@nycu.edu.tw
    affiliation: >-
      Institute of Physics, National Yang Ming Chiao Tung
      University, 1001 Ta-Hsueh Road, Hsinchu 30010, Taiwan
  - given-names: Biagio
    family-names: Lucini
    email: B.Lucini@Swansea.ac.uk
    affiliation: >-
      Swansea Academy of Advanced Computing, Swansea
      University (Bay Campus), Fabian Way, SA1 8EN Swansea,
      Wales, United Kingdom
    orcid: 'https://orcid.org/0000-0001-8974-8266'
  - email: alessandro.lupo@cpt.univ-mrs.fr
    affiliation: >-
      Aix-Maseille Universite, Universite de Toulon,
    CNRS, CPT, Marseille, France
    given-names: Alessandro
    family-names: Lupo
    orcid: 'https://orcid.org/0000-0001-9661-7811'
  - given-names: Maurizio
    family-names: Piai
    orcid: 'https://orcid.org/0000-0002-2251-0111'
    affiliation: >-
      Department of Physics, Faculty  of Science and
      Engineering, Swansea University, Singleton Park, SA2
      8PP, Swansea, Wales, UK
    email: m.piai@swansea.ac.uk
  - given-names: Davide
    family-names: Vadacchino
    affiliation: >-
      Centre for Mathematical Sciences, University of
      Plymouth, Plymouth, PL4 8AA, United Kingdom
    email: davide.vadacchino@plymouth.ac.uk
    orcid: 'https://orcid.org/0000-0002-5783-5602'
  - given-names: Fabian
    family-names: Zierler
    affiliation: >-
      Department of Physics, Faculty  of Science and
      Engineering, Swansea University, Singleton Park, SA2
      8PP, Swansea, Wales, UK
    email: fabian.zierler@swansea.ac.uk
    orcid: 'https://orcid.org/0000-0002-8670-4054'
  - given-names: Ed
    family-names: Bennett
    affiliation: >-
      Swansea Academy of Advanced Computing, Swansea
      University (Bay Campus), Fabian Way, SA1 8EN Swansea,
      Wales, United Kingdom
    email: ed.bennett@swansea.ac.uk
    orcid: 'https://orcid.org/0000-0002-1678-6701'

GitHub Events

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Last synced: 10 months ago

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  • Total issues: 6
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  • Average time to close issues: 11 days
  • Average time to close pull requests: about 2 hours
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Past Year
  • Issues: 6
  • Pull requests: 1
  • Average time to close issues: 11 days
  • Average time to close pull requests: about 2 hours
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 2.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
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Dependencies

just_plotting/code/topologies/flow_analysis/pyproject.toml pypi
just_plotting/code/topologies/flow_analysis/requirements.txt pypi
  • numpy *
  • pre-commit *
  • scipy *
  • uncertainties *