latrend - v1.6.1

• trajectories(lcModel) outputs cluster membership (#153)
• Improved visuals of trajectory plots (#152)
• Fixed dynamic variable handling (#151)

- R
Published by niekdt almost 2 years ago

latrend - v1.6.0

latrend v1.6.0

• Resolved CRAN problems (#147)
• Re-added clusterCrit as dependency (#145)
• Ordering and labeling of cluster trajectories in plot (#144, #142)

- R
Published by niekdt almost 2 years ago

latrend - v1.5.1

• Resolved CRAN errors and warnings
• Alternative implementation of ASW and Dunn index due to removal of clusterCrit package from CRAN (#131, #132)
• New PAP.adh dataset (#130)
• Added support to lcmm methods for (parallel) gridsearch (#126)
• More robust implementation of meta methods, allowing argument pass-through (#128)
• Improved package documentation (#127)

- R
Published by niekdt almost 3 years ago

latrend - v1.5.0

New features

• Implemented virtual class for meta methods (#61)
• Implemented a meta method for repeatedly fitting a method and selecting the best fit (see lcFitRep, lcFitRepMin, lcFitRepMax) (#61)
• Implemented a meta method for repeatedly fitting a method until convergence (see lcFitConverged) (#61)

Major changes

• Made getLcMethod() generic

Other changes

• Added check for formula argument to LMKM method
• Added "converged" slot to lcModelPartition
• Generic validate() checks for correct output length
• Added workaround for erroneous R CMD check rmarkdown import note

- R
Published by niekdt over 3 years ago

latrend - v1.4.3

• Removed usage of soon-to-be deprecated ggplot functions

- R
Published by niekdt over 3 years ago

latrend - v1.4.2

Bug fixes

• Fixed minor bug in evaluate.lcMethod()

CRAN

• Resolved lcmm test error
• Shortened runtime of vignettes
• Shortened runtime of tests

- R
Published by niekdt over 3 years ago

latrend - v1.4.1

Bug fixes

• Fixed bug in predict.lcModel() introduced by #116
• Attempt to fix the documentation warning about how the escaped ampersand is not escaped

Breaking changes

• Default initialization of lcMethodLcmmGMM and lcMethodLcmmGBTM is set to init = "lme" to support lcmm v2.0.0 #121

- R
Published by niekdt over 3 years ago

latrend - v1.4.0

New features

• Added RMSE and WRMSE metrics
• plotMetric() now shows legend when grouping
• externalMetric(lcModels) returns a named distance matrix

Bug fixes

• Improved kml package compatibility; fixed errors on datasets with variable-length short trajectories
• Resolved warnings from latrendBoot() and latrendCV()

Breaking changes

• Removed redundant lcModelCustom in favor of lcModelPartition
• Renamed lcMethodCustom to lcMethodFunction for clarity

- R
Published by niekdt over 3 years ago

latrend - v1.3.1

• Added RMSE and WRMSE metrics (#106)
• Bugfix: latrendBoot and latrendCV drop empty trajectory identifier levels during sampling (#107)
• Implemented color scale and legend for grouped metric plot (#108)

- R
Published by niekdt over 3 years ago

latrend - v1.3.0

New features

1. Parameterized method testing framework for lcMethod and lcModel implementations. See test.latrend().
2. Warnings for missing data observations
3. Better handling of data with missing observations

Breaking changes

1. Removed support for the longclust package as it is no longer available on CRAN.

Other changes

1. Updated examples, vignettes and tests to pass with _R_CHECK_DEPENDS_ONLY_ = true.

- R
Published by niekdt over 3 years ago

latrend - v1.2.2

• #93 Output warning when data contains trajectories with 1 observation. The threshold is configurable using the latrend.warnTrajectoryLength option.
• Fixed possible error in examples
• Improved code robustness by removing use of mapply()

- R
Published by niekdt about 4 years ago

latrend - v1.2.1

What's Changed

• Fewer required imports
• Reduced test and example time
• Documentation of metrics and external metrics

- R
Published by niekdt about 4 years ago

latrend - v1.2.0

See https://philips-software.github.io/latrend/news/

- R
Published by niekdt about 4 years ago

latrend - v1.2.0-beta2

latrend_1.2.0.tar.gz

- R
Published by niekdt over 4 years ago

latrend -

- R
Published by niekdt over 4 years ago

latrend - v1.2.0-alpha

latrend_1.2.0.tar.gz

- R
Published by niekdt over 4 years ago

latrend - v1.1.4

latrend_1.1.4.tar.gz

- R
Published by niekdt over 4 years ago

latrend - v1.1.2

Changes compared to v1.1.0

• Parallel computation for latrendRep(), latrendBatch(), latrendBoot(), and latrendCV() through the foreach package. Package tests make use of the doParallel package, which has been added as a suggested package.
• Added parallel computation examples in ?'latrend-parallel'.
• Updated akmedoids interface due to changes in akmedoids 1.3.0.
• Addressed R CMD check notes
  • Removed doMC package suggestion as it results in a CMD check error in Windows.
  • Auto-removal of cld.Rdata file generated by kml

Files

latrend_1.1.2.tar.gz

- R
Published by niekdt almost 5 years ago

latrend - v1.1.1

• Parallel computation for latrendRep(), latrendBatch(), latrendBoot(), and latrendCV() through the foreach package.
• Added parallel computation examples in ?'latrend-parallel'.
• Updated akmedoids interface due to changes in akmedoids 1.3.0.

latrend_1.1.1.tar.gz

- R
Published by niekdt almost 5 years ago

latrend - 1.1.0

Major update over 1.0.1, including changes to the framework to improve (naming) consistency, as well as bug fixes.

latrend_1.1.0.tar.gz

- R
Published by niekdt almost 5 years ago

latrend - 1.0.5

latrend_1.0.5.tar.gz

• Changed several aspects of the interface regarding function output. Not backwards compatible.
• Modified the lcMethodLcmm arguments to more closely match the original hlme function.
• Changed model implementations to use predictForCluster() instead of predict(). Does not affect output.
• Fixes several bugs related to predict()

- R
Published by niekdt about 5 years ago

latrend - 1.0.2

latrend_1.0.2.tar.gz

- R
Published by niekdt about 5 years ago

latrend - 1.0.0

latrend_1.0.0.tar.gz

- R
Published by niekdt over 5 years ago