cs-nf-pipelines

The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines

https://github.com/thejacksonlaboratory/cs-nf-pipelines

Science Score: 59.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
✓
DOI references
Found 3 DOI reference(s) in README
✓
Academic publication links
Links to: zenodo.org
✓
Committers with academic emails
2 of 28 committers (7.1%) from academic institutions
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (4.8%) to scientific vocabulary

Last synced: 7 months ago · JSON representation

Repository

The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines

Basic Info

Host: GitHub
Owner: TheJacksonLaboratory
License: mit
Language: Nextflow
Default Branch: main
Size: 119 MB

Statistics

Stars: 22
Watchers: 5
Forks: 10
Open Issues: 0
Releases: 30

Created about 4 years ago · Last pushed 9 months ago

Metadata Files

Readme License Zenodo

JAX NGS Operations Nextflow DSL2 Pipelines

This repository contains production bioinformatic analysis pipelines.

Pipeline Level Documentation, Quick Start, and Developer Documentation:

Please see the Wiki documentation associated with this repository for all documentation.

Owner

Name: The Jackson Laboratory
Login: TheJacksonLaboratory
Kind: organization
Location: Bar Harbor, ME | Farmington, CT | Sacramento, CA

Website: https://www.jax.org/
Repositories: 145
Profile: https://github.com/TheJacksonLaboratory

The Jackson Laboratory: Leading the search for tomorrow's cures.

GitHub Events

Total

Create event: 5
Release event: 4
Issues event: 8
Watch event: 4
Issue comment event: 19
Push event: 4
Gollum event: 11
Fork event: 1

Last Year

Create event: 5
Release event: 4
Issues event: 8
Watch event: 4
Issue comment event: 19
Push event: 4
Gollum event: 11
Fork event: 1

Committers

Last synced: 8 months ago

All Time

Total Commits: 1,175
Total Committers: 28
Avg Commits per committer: 41.964
Development Distribution Score (DDS): 0.494

Past Year

Commits: 74
Committers: 3
Avg Commits per committer: 24.667
Development Distribution Score (DDS): 0.216

Top Committers

Name	Email	Commits
Mike Lloyd	M**d@j**g	594
Brian J. Sanderson	b**n@j**g	281
peterdfields	p**s@u**h	82
Barry Guglielmo	g**b@b**g	49
guglib	b**o@j**g	47
Sai Lek	s**k@s**g	22
Peter Fields	p**s@j**g	19
Sai Lek	s**k@s**g	18
sam-widmayer	s**r@j**g	15
Tejas Temker	t**t@s**g	15
Barry Guglielmo	g**b@s**g	7
Barry Guglielmo	g**b@s**g	6
Barry Guglielmo	g**b@s**g	3
Barry Guglielmo	g**b@s**g	2
Barry Guglielmo	g**b@s**g	2
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Harshpreet Chandok	c**h@s**g	1
Peter Fields	p**s@d**h	1
Sai Lek	s**k@s**g	1
Alan Hoyle	a**n@a**m	1
ardianferraj	f**i@g**m	1

Committer Domains (Top 20 + Academic)

jax.org: 5 sumner-log2.sumner.jax.org: 3 sumner-log1.sumner.jax.org: 2 unibas.ch: 1 bitbucket.jax.org: 1 sumner121.sumner2.jax.org: 1 sumner098.sumner.jax.org: 1 sumner101.sumner.jax.org: 1 sumner017.sumner.jax.org: 1 sumner020.sumner.jax.org: 1 sumner024.sumner.jax.org: 1 sumner025.sumner.jax.org: 1 sumner038.sumner.jax.org: 1 sumner057.sumner.jax.org: 1 sumner071.sumner.jax.org: 1 sumner076.sumner.jax.org: 1 sumner080.sumner.jax.org: 1 dyn-39-80.mobile.unibas.ch: 1 sumner051.sumner.jax.org: 1 alanhoyle.com: 1

Issues and Pull Requests