cs-nf-pipelines

The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines

https://github.com/thejacksonlaboratory/cs-nf-pipelines

Science Score: 59.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
✓
DOI references
Found 3 DOI reference(s) in README
✓
Academic publication links
Links to: zenodo.org
✓
Committers with academic emails
2 of 28 committers (7.1%) from academic institutions
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (4.8%) to scientific vocabulary

Last synced: 10 months ago · JSON representation

Repository

The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines

Basic Info

Host: GitHub
Owner: TheJacksonLaboratory
License: mit
Language: Nextflow
Default Branch: main
Size: 119 MB

Statistics

Stars: 22
Watchers: 5
Forks: 10
Open Issues: 0
Releases: 30

Created over 4 years ago · Last pushed 12 months ago

Metadata Files

Readme License Zenodo

JAX NGS Operations Nextflow DSL2 Pipelines

This repository contains production bioinformatic analysis pipelines.

Pipeline Level Documentation, Quick Start, and Developer Documentation:

Please see the Wiki documentation associated with this repository for all documentation.

Owner

Name: The Jackson Laboratory
Login: TheJacksonLaboratory
Kind: organization
Location: Bar Harbor, ME | Farmington, CT | Sacramento, CA

Website: https://www.jax.org/
Repositories: 145
Profile: https://github.com/TheJacksonLaboratory

The Jackson Laboratory: Leading the search for tomorrow's cures.

GitHub Events

Total

Create event: 5
Release event: 4
Issues event: 8
Watch event: 4
Issue comment event: 19
Push event: 4
Gollum event: 11
Fork event: 1

Last Year

Create event: 5
Release event: 4
Issues event: 8
Watch event: 4
Issue comment event: 19
Push event: 4
Gollum event: 11
Fork event: 1

Committers

Last synced: 11 months ago

All Time

Total Commits: 1,175
Total Committers: 28
Avg Commits per committer: 41.964
Development Distribution Score (DDS): 0.494

Past Year

Commits: 74
Committers: 3
Avg Commits per committer: 24.667
Development Distribution Score (DDS): 0.216

Top Committers

Name	Email	Commits
Mike Lloyd	M**d@j**g	594
Brian J. Sanderson	b**n@j**g	281
peterdfields	p**s@u**h	82
Barry Guglielmo	g**b@b**g	49
guglib	b**o@j**g	47
Sai Lek	s**k@s**g	22
Peter Fields	p**s@j**g	19
Sai Lek	s**k@s**g	18
sam-widmayer	s**r@j**g	15
Tejas Temker	t**t@s**g	15
Barry Guglielmo	g**b@s**g	7
Barry Guglielmo	g**b@s**g	6
Barry Guglielmo	g**b@s**g	3
Barry Guglielmo	g**b@s**g	2
Barry Guglielmo	g**b@s**g	2
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Barry Guglielmo	g**b@s**g	1
Harshpreet Chandok	c**h@s**g	1
Peter Fields	p**s@d**h	1
Sai Lek	s**k@s**g	1
Alan Hoyle	a**n@a**m	1
ardianferraj	f**i@g**m	1

Committer Domains (Top 20 + Academic)

jax.org: 5 sumner-log2.sumner.jax.org: 3 sumner-log1.sumner.jax.org: 2 unibas.ch: 1 bitbucket.jax.org: 1 sumner121.sumner2.jax.org: 1 sumner098.sumner.jax.org: 1 sumner101.sumner.jax.org: 1 sumner017.sumner.jax.org: 1 sumner020.sumner.jax.org: 1 sumner024.sumner.jax.org: 1 sumner025.sumner.jax.org: 1 sumner038.sumner.jax.org: 1 sumner057.sumner.jax.org: 1 sumner071.sumner.jax.org: 1 sumner076.sumner.jax.org: 1 sumner080.sumner.jax.org: 1 dyn-39-80.mobile.unibas.ch: 1 sumner051.sumner.jax.org: 1 alanhoyle.com: 1

Issues and Pull Requests