hpcbio-swc-bioc-intro

https://github.com/hpcbio/hpcbio-swc-bioc-intro

Science Score: 52.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
Found CITATION.cff file
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codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
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DOI references
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Academic publication links
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Academic email domains
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Institutional organization owner
Organization hpcbio has institutional domain (www.hpcbio.illinois.edu)
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (12.6%) to scientific vocabulary

Last synced: 6 months ago · JSON representation ·

Repository

Basic Info

Host: GitHub
Owner: HPCBio
License: other
Language: R
Default Branch: main
Homepage: https://hpcbio.github.io/hpcbio-swc-bioc-intro
Size: 795 MB

Statistics

Stars: 0
Watchers: 5
Forks: 0
Open Issues: 1
Releases: 0

Created about 1 year ago · Last pushed 6 months ago

Metadata Files

Readme Contributing License Code of conduct Citation Authors

Introduction to genomic data analysis with R and Bioconductor

Contributing

We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any questions, concerns, or experience any difficulties along the way.

We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at the more detailed guidelines on proper formatting, ways to render the lesson locally, and even how to write new episodes.

Please see the current list of [issues][FIXME] for ideas for contributing to this repository. For making your contribution, we use the GitHub flow, which is nicely explained in the chapter Contributing to a Project in Pro Git by Scott Chacon.

Look for the tag $good\_first\_issue$ . This indicates that the maintainers will welcome a pull request fixing this issue.

Useful links

If you're going to be developing lesson material for the first time according to our design principles, consider reading the Carpentries Curriculum Development Handbook
Consult the Lesson Example website to find out more about working with the lesson template

Lesson team

This lesson has been developed and is current maintained by

Laurent Gatto (maintainer)
Charlotte Soneson
Jenny Drnevich
Robert Castelo
Kevin Rue-Albert

We would also like to acknowledge the contributions of:

Oliver Crook, Sarah Kaspar, Nick Hirschmueller, Lisa Breckels and Maria Doyle for their contributions during the Bioconductor introduction workshop in Heidelberg, as part of EuroBioc2021 |> 2022.
Axelle Loriot, Marco Chiapelle, Manon Martin and Toby Hodges for various contributions and discussions.
lmsimp, alorot, manonmartin, mchiapello, stavares843, JennyZadeh, csdaw, ninja-1337, fursham-h, lagerratrobe, fmichonneau, federicomarini, tobyhodges for pull requests.

If we have contributed but we missed you, apologies, and feel free to add yourself with a PR.

Authors

A list of contributors to the lesson can be found in AUTHORS

Citation

To cite this lesson, please consult with CITATION

Testing locally

To test locally, run the following in the lessons directory:

r sandpaper::serve()

For more details, see the [workbench installation instructions](https://carpentries.github.io/workbench/#installation].

Owner

Name: High Performance Computing in Biology
Login: HPCBio
Kind: organization
Location: University of Illinois at Urbana-Champaign

Website: http://www.hpcbio.illinois.edu
Repositories: 71
Profile: https://github.com/HPCBio

High performance computational biology at the University of Illinois

Citation (CITATION)

FIXME: describe how to cite this lesson.

GitHub Events

Total

Delete event: 1
Issue comment event: 2
Push event: 78
Pull request event: 3
Create event: 19

Last Year

Delete event: 1
Issue comment event: 2
Push event: 78
Pull request event: 3
Create event: 19

Issues and Pull Requests

Last synced: 6 months ago

All Time

Total issues: 0
Total pull requests: 1
Average time to close issues: N/A
Average time to close pull requests: N/A
Total issue authors: 0
Total pull request authors: 1
Average comments per issue: 0
Average comments per pull request: 0.0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 0
Pull requests: 1
Average time to close issues: N/A
Average time to close pull requests: N/A
Issue authors: 0
Pull request authors: 1
Average comments per issue: 0
Average comments per pull request: 0.0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

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