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Recent Releases of choleraseq

choleraseq - 1.1.0: Rework main workflow and accommodate reviewer comments

What's Changed

  • Feature/fix clustering by @abhi18av in https://github.com/CERI-KRISP/CholeraSeq/pull/9

These changes were made in agreement with @mstagliamonte @EduanWilkinson @cmavian

Full Changelog: https://github.com/CERI-KRISP/CholeraSeq/compare/1.0.1...1.1.0

- Nextflow
Published by abhi18av 6 months ago

choleraseq - v1.0.1: Bugfix for typo in variable name

- Nextflow
Published by abhi18av 10 months ago

choleraseq - Initial release of the pipeline.

What's Changed

  • Sync the latest developments and prepare for v0.9 by @abhi18av in https://github.com/CERI-KRISP/CholeraSeq/pull/1
  • Sync master with dev with the latest changes by @abhi18av in https://github.com/CERI-KRISP/CholeraSeq/pull/2
  • Add test profile by @abhi18av in https://github.com/CERI-KRISP/CholeraSeq/pull/3
  • Add fasta cleaner script by @abhi18av in https://github.com/CERI-KRISP/CholeraSeq/pull/5
  • Implement a subworkflow to allow patching of global core alignment. by @abhi18av in https://github.com/CERI-KRISP/CholeraSeq/pull/6

New Contributors

  • @abhi18av made their first contribution in https://github.com/CERI-KRISP/CholeraSeq/pull/1

Full Changelog: https://github.com/CERI-KRISP/CholeraSeq/commits/1.0.0

- Nextflow
Published by abhi18av 11 months ago