folio
Datasets for Teaching Archaeology and Palaeontology - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/folio
Science Score: 77.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 15 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
1 of 1 committers (100.0%) from academic institutions -
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (19.1%) to scientific vocabulary
Keywords
archaeological-science
archaeology
datasets
paleontology
r-package
Last synced: 6 months ago
·
JSON representation
·
Repository
Datasets for Teaching Archaeology and Palaeontology - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/folio
Basic Info
- Host: GitHub
- Owner: tesselle
- License: gpl-3.0
- Language: R
- Default Branch: main
- Homepage: https://packages.tesselle.org/folio/
- Size: 1.48 MB
Statistics
- Stars: 14
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 7
Topics
archaeological-science
archaeology
datasets
paleontology
r-package
Created about 5 years ago
· Last pushed 9 months ago
Metadata Files
Readme
Changelog
Contributing
License
Code of conduct
Citation
Codemeta
README.Rmd
---
output: github_document
---
```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = NULL
)
Sys.setenv(LANGUAGE = "en") # Force locale
```
# folio 
[](https://ci.codeberg.org/repos/14690){.pkgdown-devel}
[](https://cran.r-project.org/package=folio){.pkgdown-devel}
[](https://tesselle.r-universe.dev){.pkgdown-devel}
[](https://cran.r-project.org/package=folio){.pkgdown-release}
[](https://cran.r-project.org/web/checks/check_results_folio.html){.pkgdown-release}
[](https://cran.r-project.org/package=folio){.pkgdown-release}
[](https://www.repostatus.org/#active)
[](https://doi.org/10.5281/zenodo.4476182)
## Overview
Datasets for teaching quantitative approaches and modeling in archaeology and paleontology. This package provides several types of data related to broad topics (cultural evolution, radiocarbon dating, paleoenvironments, etc.), which can be used to illustrate statistical methods in the classroom (multivariate data analysis, compositional data analysis, diversity measurement, etc.).
This package is for teaching purposes only: some datasets may be outdated.
**When using folio, you must cite the relevant publications for each dataset (see the documentation).**
---
```{r citation, echo=FALSE, comment='', results='asis'}
cite <- utils::citation("folio")
print(cite, bibtex = FALSE)
```
## Installation
You can install the released version of **folio** from [CRAN](https://CRAN.R-project.org) with:
```{r cran-installation, eval=FALSE}
install.packages("folio")
```
And the development version from [Codeberg](https://codeberg.org/) with:
```{r gh-installation, eval=FALSE}
# install.packages("remotes")
remotes::install_git("https://codeberg.org/tesselle/folio")
```
## Usage
```{r, fig.width=5, fig.height=5, fig.align='center'}
## Arnold and Libby's Curve of Knowns
## Replicate fig. 1 from Arnold and Libby (1949)
data("arnold1949")
fit <- lm(activity_found ~ age_expected, data = arnold1949)
summary(fit)
plot(
x = arnold1949$age_expected,
y = arnold1949$activity_found,
type = "p",
pch = 16,
xlab = "Historical age (years)",
ylab = "Specific activity (C/m/g)",
main = "Samples of known ages"
)
segments(
x0 = arnold1949$age_expected,
y0 = arnold1949$activity_found - arnold1949$activity_found_error,
x1 = arnold1949$age_expected,
y1 = arnold1949$activity_found + arnold1949$activity_found_error
)
segments(
x0 = arnold1949$age_expected - arnold1949$age_expected_error,
y0 = arnold1949$activity_found,
x1 = arnold1949$age_expected + arnold1949$age_expected_error,
y1 = arnold1949$activity_found
)
abline(fit, col = "red")
```
## Related Works
* [**archdata**](https://cran.r-project.org/package=archdata) includes archaeological datasets used in [*Quantitative Methods in Archaeology Using R*](https://doi.org/10.1017/9781139628730) by David L. Carlson (2017).
* [**historydata**](https://cran.r-project.org/package=historydata) includes datasets intended for historians learning R.
## Contributing
Please note that the **folio** project is released with a [Contributor Code of Conduct](https://www.tesselle.org/conduct.html). By contributing to this project, you agree to abide by its terms.
```{r metadata, include=FALSE}
## Update codemeta.json
codemetar::write_codemeta(verbose = FALSE)
## Update CITATION.cff
cff_keys <- list(
identifiers = list(
list(description = "The concept DOI.",
type = "doi",
value = "10.5281/zenodo.4476182"),
list(description = "The versioned DOI for version 0.1.0.",
type = "doi",
value = "10.5281/zenodo.4476183"),
list(description = "The versioned DOI for version 1.0.0.",
type = "doi",
value = "10.5281/zenodo.4537570"),
list(description = "The versioned DOI for version 1.1.0.",
type = "doi",
value = "10.5281/zenodo.6523636"),
list(description = "The versioned DOI for version 1.2.0.",
type = "doi",
value = "10.5281/zenodo.6993457"),
list(description = "The versioned DOI for version 1.3.0.",
type = "doi",
value = "10.5281/zenodo.7267613"),
list(description = "The versioned DOI for version 1.4.0.",
type = "doi",
value = "10.5281/zenodo.10708937"),
list(description = "The versioned DOI for version 1.5.0.",
type = "doi",
value = "10.5281/zenodo.13643896"),
list(description = "The versioned DOI for version 1.5.1.",
type = "doi",
value = "10.5281/zenodo.15450499"),
list(description = "The CRAN DOI",
type = "doi",
value = "10.32614/cran.package.folio")
)
)
cff <- cffr::cff_create("DESCRIPTION", keys = cff_keys)
if (cffr::cff_validate(cff)) cffr::cff_write(cff, outfile = "CITATION.cff")
```
Owner
- Name: tesselle
- Login: tesselle
- Kind: organization
- Location: France
- Website: www.tesselle.org
- Repositories: 5
- Profile: https://github.com/tesselle
A collection of R packages for archaeological research and teaching
Citation (CITATION.cff)
# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
cff-version: 1.2.0
message: 'To cite package "folio" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'folio: Datasets for Teaching Archaeology and Paleontology'
version: 1.5.1
doi: 10.5281/zenodo.4476182
identifiers:
- description: The concept DOI.
type: doi
value: 10.5281/zenodo.4476182
- description: The versioned DOI for version 0.1.0.
type: doi
value: 10.5281/zenodo.4476183
- description: The versioned DOI for version 1.0.0.
type: doi
value: 10.5281/zenodo.4537570
- description: The versioned DOI for version 1.1.0.
type: doi
value: 10.5281/zenodo.6523636
- description: The versioned DOI for version 1.2.0.
type: doi
value: 10.5281/zenodo.6993457
- description: The versioned DOI for version 1.3.0.
type: doi
value: 10.5281/zenodo.7267613
- description: The versioned DOI for version 1.4.0.
type: doi
value: 10.5281/zenodo.10708937
- description: The versioned DOI for version 1.5.0.
type: doi
value: 10.5281/zenodo.13643896
- description: The versioned DOI for version 1.5.1.
type: doi
value: 10.5281/zenodo.15450499
- description: The CRAN DOI
type: doi
value: 10.32614/cran.package.folio
abstract: Datasets for teaching quantitative approaches and modeling in archaeology
and paleontology. This package provides several types of data related to broad topics
(cultural evolution, radiocarbon dating, paleoenvironments, etc.), which can be
used to illustrate statistical methods in the classroom (multivariate data analysis,
compositional data analysis, diversity measurement, etc.).
authors:
- family-names: Frerebeau
given-names: Nicolas
email: nicolas.frerebeau@u-bordeaux-montaigne.fr
orcid: https://orcid.org/0000-0001-5759-4944
preferred-citation:
type: manual
title: 'folio: Datasets for Teaching Archaeology and Paleontology'
authors:
- family-names: Frerebeau
given-names: Nicolas
email: nicolas.frerebeau@u-bordeaux-montaigne.fr
orcid: https://orcid.org/0000-0001-5759-4944
year: '2025'
institution:
name: Université Bordeaux Montaigne
address: Pessac, France
notes: R package version 1.5.1
url: https://packages.tesselle.org/folio/
doi: 10.5281/zenodo.4476182
repository: https://CRAN.R-project.org/package=folio
repository-code: https://codeberg.org/tesselle/folio
url: https://packages.tesselle.org/folio/
contact:
- family-names: Frerebeau
given-names: Nicolas
email: nicolas.frerebeau@u-bordeaux-montaigne.fr
orcid: https://orcid.org/0000-0001-5759-4944
keywords:
- archaeology
- archaeological-science
- paleontology
- datasets
- r-package
references:
- type: software
title: 'R: A Language and Environment for Statistical Computing'
notes: Depends
url: https://www.R-project.org/
authors:
- name: R Core Team
institution:
name: R Foundation for Statistical Computing
address: Vienna, Austria
year: '2025'
version: '>= 2.10'
CodeMeta (codemeta.json)
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"name": "folio: Datasets for Teaching Archaeology and Paleontology",
"relatedLink": [
"https://packages.tesselle.org/folio/",
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"fileSize": "532.047KB",
"citation": [
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],
"developmentStatus": "https://www.repostatus.org/#active"
}GitHub Events
Total
- Watch event: 1
- Push event: 4
- Create event: 1
Last Year
- Watch event: 1
- Push event: 4
- Create event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| nfrerebeau | n****u@u****r | 60 |
Committer Domains (Top 20 + Academic)
Dependencies
DESCRIPTION
cran
- R >= 2.10 depends