ersem

European Regional Seas Ecosystem Model

https://github.com/pmlmodelling/ersem

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 3 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Committers with academic emails
    8 of 16 committers (50.0%) from academic institutions
  • Institutional organization owner
    Organization pmlmodelling has institutional domain (pml.ac.uk)
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (11.7%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

European Regional Seas Ecosystem Model

Basic Info
  • Host: GitHub
  • Owner: pmlmodelling
  • License: gpl-3.0
  • Language: Fortran
  • Default Branch: master
  • Homepage:
  • Size: 72.9 MB
Statistics
  • Stars: 25
  • Watchers: 5
  • Forks: 12
  • Open Issues: 46
  • Releases: 3
Created over 5 years ago · Last pushed 7 months ago
Metadata Files
Readme License Zenodo

README.md

Tests Documentation Status

ERSEM

ERSEM diagram

ERSEM is a marine biogeochemical and ecosystem model. It describes the cycling of carbon, nitrogen, phosphorus, silicon, oxygen and iron through the lower trophic level pelagic and benthic ecosystems.

  • Installation Instructions: conda: https://ersem.readthedocs.io/en/latest/tutorials/index.html#conda-installation, source: https://ersem.readthedocs.io/en/latest/developers/index.html
  • User Documentation & Example Usage: https://ersem.readthedocs.io/en/latest/
  • Automated Tests: Run via GitHub Actions https://github.com/pmlmodelling/ersem/actions
  • Acknowledgements: https://ersem.readthedocs.io/en/latest/acknowledgements.html
  • License: https://ersem.readthedocs.io/en/latest/license.html

Support

We strongly encourage everyone using the ERSEM code to register as a user by filling a short registration form. We’d love to get a better understanding of who is using the ERSEM code and for what applications, as it will help us to provide the best support to the user community. It will also allow you to receive information and news on the latest model developments.

How to cite

To refer to ERSEM in publications, please cite:

Butenschön, M., Clark, J., Aldridge, J.N., Allen, J.I., Artioli, Y., Blackford, J., Bruggeman, J., Cazenave, P., Ciavatta, S., Kay, S., Lessin, G., van Leeuwen, S., van der Molen, J., de Mora, L., Polimene, L., Sailley, S., Stephens, N., Torres, R. (2016). ERSEM 15.06: a generic model for marine biogeochemistry and the ecosystem dynamics of the lower trophic levels. Geoscientific Model Development, 9(4), 1293–1339. doi: 10.5194/gmd-9-1293-2016.

To refer specifically to the ERSEM source code, you may use its Zenodo DOI:

DOI

Owner

  • Name: Marine Systems Modelling group at the Plymouth Marine Laboratory
  • Login: pmlmodelling
  • Kind: organization

GitHub Events

Total
  • Issues event: 4
  • Watch event: 2
  • Push event: 2
  • Pull request event: 1
  • Create event: 1
Last Year
  • Issues event: 4
  • Watch event: 2
  • Push event: 2
  • Pull request event: 1
  • Create event: 1

Committers

Last synced: 6 months ago

All Time
  • Total Commits: 677
  • Total Committers: 16
  • Avg Commits per committer: 42.313
  • Development Distribution Score (DDS): 0.511
Past Year
  • Commits: 19
  • Committers: 4
  • Avg Commits per committer: 4.75
  • Development Distribution Score (DDS): 0.158
Top Committers
Name Email Commits
Jorn Bruggeman j****r@p****k 331
Gennadi Lessin g****e@p****k 93
Momme Butenschoen m****m@p****k 81
Jorn Bruggeman j****n@b****m 77
Michael Wathen m****n@g****m 36
Yuri Artioli y****i@p****k 22
Michael Wathen m****n@c****a 17
jornbr j****r@5****3 5
Karsten Bolding b****d@d****k 3
Rebecca Millington c****3@g****m 3
Karsten Bolding k****n@b****m 3
Helen Powley h****o@p****k 2
Ricardo Torres r****o@p****k 1
James Clark j****l@p****k 1
bolding b****g@5****3 1
Dr Jorn Bruggeman j****r@e****) 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 81
  • Total pull requests: 54
  • Average time to close issues: 5 months
  • Average time to close pull requests: about 1 month
  • Total issue authors: 7
  • Total pull request authors: 6
  • Average comments per issue: 0.31
  • Average comments per pull request: 1.0
  • Merged pull requests: 47
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 2
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 3
  • Pull request authors: 2
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • wathen (45)
  • glessin (14)
  • yutiPML (7)
  • jimc101 (5)
  • hpowley (5)
  • r-millington (4)
  • jornbr (2)
Pull Request Authors
  • wathen (45)
  • yutiPML (8)
  • glessin (7)
  • r-millington (2)
  • hpowley (2)
  • jornbr (2)
Top Labels
Issue Labels
documentation (31) bug (11) enhancement (9) good first issue (1) question (1) invalid (1)
Pull Request Labels
documentation (1) bug (1)

Dependencies

docs/requirements.txt pypi
  • beautifulsoup4 *
  • m2r2 *
  • numpy *
  • sphinx *
  • sphinx-panels *
  • sphinx_rtd_theme *
  • sphinxcontrib-bibtex *
.github/workflows/ersem.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
pyproject.toml pypi