mothur
Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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✓Committers with academic emails
6 of 30 committers (20.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.5%) to scientific vocabulary
Repository
Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
Basic Info
- Host: GitHub
- Owner: mothur
- License: gpl-3.0
- Language: C++
- Default Branch: master
- Homepage: www.mothur.org
- Size: 165 MB
Statistics
- Stars: 272
- Watchers: 33
- Forks: 110
- Open Issues: 25
- Releases: 49
Metadata Files
README.md
README
Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community. mothur is available under the GPL license.
Useful links... * The current release * Wiki documentation * User forum * Blog
References... * SILVA * greengenes * RDP
See the citation file for how to cite mothur.
Owner
- Name: mothur
- Login: mothur
- Kind: organization
- Location: Ann Arbor, MI
- Website: www.mothur.org
- Repositories: 10
- Profile: https://github.com/mothur
GitHub Events
Total
- Create event: 3
- Issues event: 13
- Release event: 2
- Watch event: 12
- Delete event: 1
- Issue comment event: 2
- Push event: 10
- Pull request event: 3
- Fork event: 1
Last Year
- Create event: 3
- Issues event: 13
- Release event: 2
- Watch event: 12
- Delete event: 1
- Issue comment event: 2
- Push event: 10
- Pull request event: 3
- Fork event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Sarah Westcott | m****t@g****m | 2,039 |
| westcott | w****t | 653 |
| pschloss | p****s | 139 |
| Pat Schloss | p****s@u****u | 88 |
| Kathryn Iverson | k****n@g****m | 52 |
| SarahsWork | s****k@i****t | 23 |
| Jin Choi | j****1@g****m | 10 |
| ryabin | r****n | 7 |
| kdiverson | 6 | |
| David McFarlane | 5****e | 4 |
| Hadrien Gourlé | g****n@g****m | 3 |
| John Westcott | j****t@l****) | 3 |
| Correy Lim | c****m@g****m | 3 |
| Tim Booth | t****h@c****k | 3 |
| Kelly Sovacool | k****l@g****m | 3 |
| SarahsWork | s****k@1****u | 3 |
| westcott | S****k@J****l | 2 |
| Abu Zaher Md. Faridee | z****4@g****m | 2 |
| Jon Lund Steffensen | j****t@g****m | 2 |
| SarahsWork | s****k@1****u | 2 |
| kiverson | k****n@1****6 | 2 |
| John Westcott | j****t@J****l | 2 |
| SarahsWork | s****k@1****u | 2 |
| Seeker | m****g@p****m | 1 |
| Ivars Silamikelis | i****s@g****m | 1 |
| Alexandre Rostovtsev | t****o@g****m | 1 |
| campenr | r****d@c****o | 1 |
| SarahsWork | s****k@1****u | 1 |
| pkubaj | p****j | 1 |
| John Westcott | j****t@J****l | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: over 1 year ago
All Time
- Total issues: 117
- Total pull requests: 9
- Average time to close issues: 3 months
- Average time to close pull requests: about 2 months
- Total issue authors: 55
- Total pull request authors: 6
- Average comments per issue: 2.3
- Average comments per pull request: 0.11
- Merged pull requests: 6
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 9
- Pull requests: 4
- Average time to close issues: 2 days
- Average time to close pull requests: about 1 month
- Issue authors: 8
- Pull request authors: 2
- Average comments per issue: 2.67
- Average comments per pull request: 0.0
- Merged pull requests: 3
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- mothur-westcott (47)
- pschloss (6)
- yurivict (4)
- jianshu93 (3)
- marwa38 (2)
- gallardoalba (2)
- boucherufl (2)
- rtrpaine (2)
- Puumanamana (2)
- bjconnor60 (2)
- didillysquat (2)
- krmaas (2)
- cbassis (1)
- Julie-bio (1)
- hermannschwaerzlerUIBK (1)
Pull Request Authors
- mothur-westcott (6)
- psyomn (2)
- lguangyu (2)
- pschloss (1)
- hermannschwaerzlerUIBK (1)
- kelly-sovacool (1)
- ccoulombe (1)