tanabesugano

A python-solver for Tanabe-Sugano and energy-correlation diagrams

https://github.com/anselmoo/tanabesugano

Science Score: 59.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 6 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Committers with academic emails
    2 of 6 committers (33.3%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (11.0%) to scientific vocabulary

Keywords

absorption-spectra complex-ions d5 energy-correlation-diagrams python python3 science simulation spectroscopy tanabe-sugano uvvis

Keywords from Contributors

hypothesis-testing surrogate transformation hack
Last synced: 6 months ago · JSON representation

Repository

A python-solver for Tanabe-Sugano and energy-correlation diagrams

Basic Info
  • Host: GitHub
  • Owner: Anselmoo
  • License: mit
  • Language: HTML
  • Default Branch: master
  • Homepage:
  • Size: 23.6 MB
Statistics
  • Stars: 18
  • Watchers: 3
  • Forks: 2
  • Open Issues: 10
  • Releases: 14
Topics
absorption-spectra complex-ions d5 energy-correlation-diagrams python python3 science simulation spectroscopy tanabe-sugano uvvis
Created over 6 years ago · Last pushed 8 months ago
Metadata Files
Readme Changelog Contributing License Citation

README.md

Python Package Poetry CodeFactor DOI GitHub GitHub release (latest by date including pre-releases) PyPI PyPI - Python Version Downloads Open In Colab

TanabeSugano

A python-based Eigensolver for Tanabe-Sugano- & Energy-Correlation-Diagrams based on the original three proposed studies of Yukito Tanabe and Satoru Sugano for d2-d8 transition metal ions:

  1. On the Absorption Spectra of Complex Ions. I

    Yukito Tanabe, Satoru Sugano Journal of the Physical Society of Japan, 9, 753-766 (1954) DOI: 10.1143/JPSJ.9.753 https://journals.jps.jp/doi/10.1143/JPSJ.9.753

  2. On the Absorption Spectra of Complex Ions II

    Yukito Tanabe, Satoru Sugano Journal of the Physical Society of Japan, 9, 766-779 (1954) DOI: 10.1143/JPSJ.9.766 https://journals.jps.jp/doi/10.1143/JPSJ.9.766

  3. On the Absorption Spectra of Complex Ions, III The Calculation of the Crystalline Field Strength

    Yukito Tanabe, Satoru Sugano Journal of the Physical Society of Japan, 11, 864-877 (1956) DOI: 10.1143/JPSJ.11.864 https://journals.jps.jp/doi/10.1143/JPSJ.11.864

It provides:

  • Tanabe-Sugano- & Energy-Correlation-Diagrams plotted via matplotlib
  • Tanabe-Sugano- & Energy-Correlation-Diagrams exported as txt-file
  • Atomic-Termsymbols and their Eigen-Energies for a given 10Dq and oxidation state as exported table via prettytable
  • Set-up individually C/B-ratios
  • Working with Slater-Condon-Parameters F2, F4 instead of Racah-Parameters B, C
  • Export of the Tanabe-Sugano-Diagram as a html-file via plotly for interactive use

The TanabeSugano-application can be installed and run:

```console # via PyPi pip install TanabeSugano

# via pip+git
pip git+https://github.com/Anselmoo/TanabeSugano.git

# locally
python setup.py install
tanabesugano

# for plotly-export
pip install TanabeSugano[plotly]

```

The options for the TanabeSugano-application are:

```console tanabesugano --help

usage: __main__.py [-h] [-d D] [-Dq DQ] [-cut CUT] [-B B B] [-C C C] [-n N]
               [-ndisp] [-ntxt] [-slater]

optional arguments:
-h, --help     show this help message and exit
-d D           Number of unpaired electrons (default d5)
-Dq DQ         10Dq crystal field splitting (default 10Dq = 8065 cm-)
-cut CUT       10Dq crystal field splitting (default 10Dq = 8065 cm-)
-B B B         Racah Parameter B and the corresponding reduction (default B = 860 cm- * 1.)
-C C C         Racah Parameter C and the corresponding reduction (default C = 4.477*860 cm- * 1.)
-n N           Number of roots (default nroots = 500)
-ndisp         Plot TS-diagram (default = on)
-ntxt          Save TS-diagram and dd energies (default = on)
-slater        Using Slater-Condon F2,F4 parameter instead Racah-Parameter B,C (default = off)
-v, --version  Print version number and exit
-html          Save TS-diagram and dd energies (default = on)

```

Reference-Example for d6 for B = 860 cm- and C = 3850 cm- as regular matplotlib-plot: placeholder

Reference-Example for d6 for F2 = 1065 cm- and F4 = 5120 cm- as interactive plotly-plot:

placeholder

Test the TS-diagrams interactively in Google Colab

Open In Colab

Owner

  • Name: Anselm Hahn
  • Login: Anselmoo
  • Kind: user
  • Location: Switzerland

GitHub Events

Total
  • Watch event: 3
  • Delete event: 13
  • Issue comment event: 39
  • Push event: 22
  • Pull request review comment event: 4
  • Pull request review event: 10
  • Pull request event: 32
  • Create event: 17
Last Year
  • Watch event: 3
  • Delete event: 13
  • Issue comment event: 39
  • Push event: 22
  • Pull request review comment event: 4
  • Pull request review event: 10
  • Pull request event: 32
  • Create event: 17

Committers

Last synced: almost 3 years ago

All Time
  • Total Commits: 156
  • Total Committers: 6
  • Avg Commits per committer: 26.0
  • Development Distribution Score (DDS): 0.051
Top Committers
Name Email Commits
Anselm Hahn A****n@g****m 148
Sourcery AI 4
ImgBotApp I****p@g****m 1
thebadgerchemist 1****t@u****m 1
ahahn a****n@c****e 1
Anselmoo A****n@c****e 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 7
  • Total pull requests: 129
  • Average time to close issues: 3 months
  • Average time to close pull requests: 23 days
  • Total issue authors: 2
  • Total pull request authors: 7
  • Average comments per issue: 0.29
  • Average comments per pull request: 0.79
  • Merged pull requests: 70
  • Bot issues: 0
  • Bot pull requests: 78
Past Year
  • Issues: 0
  • Pull requests: 20
  • Average time to close issues: N/A
  • Average time to close pull requests: about 2 months
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 1.55
  • Merged pull requests: 6
  • Bot issues: 0
  • Bot pull requests: 14
Top Authors
Issue Authors
  • Anselmoo (6)
  • thebadgerchemist (1)
Pull Request Authors
  • dependabot[bot] (100)
  • Anselmoo (57)
  • sourcery-ai[bot] (4)
  • imgbot[bot] (2)
  • thebadgerchemist (1)
  • github-actions[bot] (1)
  • sourcery-ai-bot (1)
Top Labels
Issue Labels
enhancement (2) bug (1)
Pull Request Labels
dependencies (100) size/XS (21) python (5) enhancement (4) Extra Small (4) size/S (3) size/XL (2) documentation (1) size/XXL (1)

Dependencies

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  • importlib-metadata 4.5.0
  • kiwisolver 1.3.1
  • matplotlib 3.4.2
  • numpy 1.20.3
  • pandas 1.2.4
  • pillow 8.2.0
  • prettytable 2.1.0
  • pyparsing 2.4.7
  • python-dateutil 2.8.1
  • pytz 2021.1
  • six 1.16.0
  • typing-extensions 3.10.0.0
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  • zipp 3.4.1
pyproject.toml pypi
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  • isort ^5.8.0 develop
  • pytest ^6.2.4 develop
  • pytest-clarity ^1.0.1 develop
  • pytest-cov ^2.12.1 develop
  • matplotlib ^3.4.2
  • numpy ^1.20.3
  • pandas ^1.2.4
  • prettytable ^2.1.0
  • python >=3.7.1,<4.0
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