Recent Releases of brainstat
brainstat - v0.4.2
Commits
- fc23ddd: [TES] workflow on 18.0 (#319) (saratheriver) #319
- 3db1449: [v0.4.2] trying to pypi it (#320) (saratheriver) #320
- 6e9f415: [v0.4.3] just work already (Sara Lariviere) #321
- 557a52e: [v0.4.3] just work already (#321) (saratheriver) #321
- 810e8de: [FIX] removed mltbx for now (saratheriver) #322
- cfdd61c: Merge branch 'master' into sl (saratheriver) #322
- 4f3fb1e: [FIX] removed mltbx for now, v0.4.2 (saratheriver) #322
- Jupyter Notebook
Published by github-actions[bot] over 3 years ago
brainstat - v0.3.5
Commits
- eb4de6a: [REF] Black v22 update (#277) (Reinder Vos de Wael) #277
- 28245e3: [FIX] Resolves nilearn mni152 mask change (#276) (Reinder Vos de Wael) #276
- 476ccd2: [FIX] Fixes for volumetric data (#278) (Reinder Vos de Wael) #278
- ccec763: Update init.py (Reinder Vos de Wael)
- Jupyter Notebook
Published by github-actions[bot] about 4 years ago
brainstat - v0.3.4
Commits
- 512791f: [FIX] Fix mypy errors (#273) (Reinder Vos de Wael) #273
- 701f0bf: [GIT] Add CITATION.cff (#272) (Reinder Vos de Wael) #272
- 87b0109: add a warning for 0.3.4 (Reinder Vos de Wael)
- 21e8b4b: [DOC] MATLAB tutorial update. (Reinder Vos de Wael) #271
- 63cdf4e: version bump (Reinder Vos de Wael)
- Jupyter Notebook
Published by github-actions[bot] about 4 years ago
brainstat - v0.2.7
Commits
- 2675ee6: [FIX] Include data_json and logging.conf with distribution (Reinder Vos de Wael) #227
- 4a6b340: Merge branch 'master' into development (Reinder Vos de Wael) #228
- 72cfaf2: version bump (Reinder Vos de Wael) #228
- 0c7a8e6: Change to MANIFEST (Reinder Vos de Wael) #228
- 07aa29d: [FIX] Fix ReadTheDocs requirements. (Reinder Vos de Wael) #231
- 2053262: Merge branch 'master' into development (Reinder Vos de Wael) #231
- d7fd5d0: [FIX] Fix erroneous Git deletion (#237) (Reinder Vos de Wael) #237
- 9e03e09: [FIX] Fix ReadTheDocs requirements (Reinder Vos de Wael) #231
- f05a399: [FIX] Fix ReadTheDocs out of memory (Reinder Vos de Wael) #231
- 2f5936a: version bump (Reinder Vos de Wael) #231
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.2.5
Commits
- 0209cdd: [DOC] Tutorial 2 (#222) (Reinder Vos de Wael) #222
- 8196da3: Merge branch 'master' into development (Reinder Vos de Wael) #223
- b84fdbb: [DOC] Tutorial 2 (#222) (#223) (Reinder Vos de Wael) #223
- 164bb3a: [DOC] MATLAB tutorial 2 (#224) (Reinder Vos de Wael) #224
- 99aeed2: Merge branch 'master' into development (Reinder Vos de Wael) #225
- 2b9a32a: version bump; fix matlab tests (Reinder Vos de Wael) #225
- 018bca1: [DOC] Embed MATLAB tutorials (Reinder Vos de Wael) #225
- c26f3b6: [FIX] Undo accidental stage. (Reinder Vos de Wael) #225
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.2.4
Commits
- 5dc296a: [ENH] Add Genetics module for MATLAB (#212) (Reinder Vos de Wael) #212
- f5e5087: Create codeql-analysis.yml (#215) (Reinder Vos de Wael) #215
- 773daa6: undo codeql push (Reinder Vos de Wael) #213
- f5cd1d0: [ENH] Adds the Glasser parcellation (#216) (Reinder Vos de Wael) #216
- 89a4b9e: [ENH] MATLAB surface decoder (#217) (Reinder Vos de Wael) #217
- c3da508: [FIX] fix mpc partial corr (#218) (Reinder Vos de Wael) #218
- 470aa91: [GIT] Remove MATLAB CI on Push (Reinder Vos de Wael) #213
- cbeecbb: [ENH] Add MICs data loader (#219) (Reinder Vos de Wael) #219
- ffe4bc1: styling (Reinder Vos de Wael) #213
- bff9120: [ENH] Added fslr-32k to MATLAB context decoder (Reinder Vos de Wael) #213
- 7d43e07: [FIX] Fix mypy complaints (Reinder Vos de Wael) #213
- 5d938df: [DOC] Tutorial 1 Update (#220) (Reinder Vos de Wael) #220
- 08b1169: Merge branch 'master' into development (Reinder Vos de Wael) #213
- 0e03e20: MATLAB tutorial 1 (#221) (Reinder Vos de Wael) #221
- 72c3bfd: [TST] Remove mesh_normalize test (Reinder Vos de Wael) #213
- 647c62f: Merge branch 'development' of github.com:MICA-MNI/BrainStat into development (Reinder Vos de Wael) #213
- dd81089: Version bump (Reinder Vos de Wael) #213
- 6c3cc7e: Fix surface processing (Reinder Vos de Wael) #213
- bcc2732: [TST] Remove tutorial test download (too big) (Reinder Vos de Wael) #213
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.2.3
Commits
- 9119ad9: [REF] General code cleanup (#201) (Reinder Vos de Wael) #201
- aefd402: [REF] Update license, setup (#202) (Reinder Vos de Wael) #202
- e456ed0: [REF] Make SLM functions private, add a print() (#208) (Reinder Vos de Wael) #208
- f83ccae: [GIT] Remove CI on push to development (Reinder Vos de Wael) #209
- 7c05a51: [REF] Add version, deprecation warning for 3.6 (#211) (Reinder Vos de Wael) #211
- 7cc9eac: version bump (Reinder Vos de Wael) #209
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.2.2
Commits
- c132b13: [ENH] Add type hinting (#195) (Reinder Vos de Wael) #195
- 370fba9: Merge branch 'master' into development (Reinder Vos de Wael) #198
- 7c5aedf: [FIX] Fix MATLAB parcellation loader (#197) (Reinder Vos de Wael) #197
- d54ea1a: version bump (Reinder Vos de Wael) #198
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.2.1
Commits
- a96977f: [DOC] Improvements to ReadTheDocs (#184) (Reinder Vos de Wael) #184
- a203a39: [GIT] Add Python 3.9 to unit tests (#189) (Reinder Vos de Wael) #189
- 02b378c: [REF] Enforce usage of intercept and identity matrix (#187) (Reinder Vos de Wael) #187
- c6a37ee: update multiple comparison correction (#191) (Reinder Vos de Wael) #191
- 84706be: import sorting (Reinder Vos de Wael) #190
- 7feb4a9: [ENH] Added a data loader (#192) (Reinder Vos de Wael) #192
- b705a32: [ENH] Added MATLAB data fetcher. (#193) (Reinder Vos de Wael) #193
- f5ec51b: [GIT] version bump (Reinder Vos de Wael) #194
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.2.0
Commits
- aacd6ad: [TST] Add mixed effects to datagen and tests for linmod (#171) (Reinder Vos de Wael) #171
- 5a44f1c: [TST, FIX] Mixed Effects models and SLM testing (#174) (Reinder Vos de Wael) #174
- 455dd87: [TST] Added windows/macos unit tests (#177) (Reinder Vos de Wael) #177
- 988e7f0: Fix unbound variable in SLM (#179) (Reinder Vos de Wael) #179
- 4484de5: [GIT] Switch to PyPi (#180) (Reinder Vos de Wael) #180
- 5bdea6f: [FIX] Fix pypi push (#181) (Reinder Vos de Wael) #181
- c4c318a: [FIX] Fix PyPi push (#182) (Reinder Vos de Wael) #182
- 6a6d905: [GIT] Make PyPi push verbose (#183) (Reinder Vos de Wael) #183
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.1.0
Commits
- 0a8c280: bump version (#164) (Reinder Vos de Wael) #164
- ad4a369: [REF] Fix Python requires, bump version (#165) (Reinder Vos de Wael) #165
- 69222e3: [FIX] fix python_requires, version bump (#166) (Reinder Vos de Wael) #166
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.0.4
Commits
- 8da1d07: [TST] Added randomfieldtheory test generation. (Reinder Vos de Wael)
- f97f3c5: Revert "[TST] Added randomfieldtheory test generation." (Reinder Vos de Wael)
- 0467c35: Update python_coverage.yml (#135) (Reinder Vos de Wael) #135
- f6a9dc3: [FIX] Matlab linear model fix (#124) (Reinder Vos de Wael) #124
- 23447c4: Datagen mesh edges (#131) (Şeyma Bayrak) #131
- f34ffa0: [TST] data generation for randomfieldtheory (#134) (Reinder Vos de Wael) #134
- c3d631c: [GIT] Update CI triggers. (#141) (Reinder Vos de Wael) #141
- fd8b200: [REF] Updates context.genetics function (#140) (Ross Markello) #140
- 912b238: [REF] Replaces numpy_groupies with np.bincount (#142) (Reinder Vos de Wael) #142
- c5e4a3f: [ENH] Added a tutorial dataset fetcher (#144) (Reinder Vos de Wael) #144
- 2bc713c: [TST] Datagen fdr (#132) (Şeyma Bayrak) #132
- f282336: [REF, DOC] Cleaning up / Documentation (#125) (Reinder Vos de Wael) #125
- a152512: [FIX] Set sphinx==3.5.4 - 4.0.0 results in errors. (#146) (Reinder Vos de Wael) #146
- dc08365: [ENH, FIX] Added tutorial 1. (#145) (Reinder Vos de Wael) #145
- d1e572e: [REF] Change term/random for FixedEffect/MixedEffect (#143) (Reinder Vos de Wael) #143
- 2a3ecd0: Datagen smoo (#149) (Şeyma Bayrak) #149
- cc199bc: [ENH, DOC] Context decoding tutorial (#148) (Reinder Vos de Wael) #148
- ddfc0de: [TST] Datagen peak clus (#136) (Şeyma Bayrak) #136
- 5d93dd6: [TST] Datagen resels (#147) (Şeyma Bayrak) #147
- 48c4467: [TST] Datagen f (#152) (Şeyma Bayrak) #152
- 8091f08: [TST] Datagen ttest (#155) (Şeyma Bayrak) #155
- 39026bc: Datagen stat threshold (#154) (Şeyma Bayrak) #154
- e6f0379: [TST] Datagen mesh normalize (#153) (Şeyma Bayrak) #153
- c28d8a0: [DOC, ENH] MPC context decoding (#157) (Reinder Vos de Wael) #157
- 9a877ff: [TST] Add URL test for histology (#160) (Reinder Vos de Wael) #160
- 6fbfd31: [FIX] Fix readthedocs (#161) (Reinder Vos de Wael) #161
- 66eb83c: [TST] MATLAB now uses new test files (#162) (Reinder Vos de Wael) #162
- d7a4f4a: bump version (Reinder Vos de Wael) #164
- Jupyter Notebook
Published by github-actions[bot] over 4 years ago
brainstat - v0.0.3
Commits
- [202faa1]: test data for linear models generated (Şeyma Bayrak) #110
- [c469c38]: initial test data generator coupled with testlinearmodel.py (Şeyma Bayrak) #110
- [09affaa]: data dir is called from .testutils (Şeyma Bayrak) #110
- [6ddf6b4]: flake8 style correction (Şeyma Bayrak) #110
- [07d7e2a]: add file thickness_n10.h5 (Şeyma Bayrak) #110
- [103ad76]: try adding h5py requirement for CI checks (Şeyma Bayrak) #110
- [4525106]: remove h5py dependency (Şeyma Bayrak) #110
- [3a36a29]: remove thickness_n10.h5 (Şeyma Bayrak) #110
- [b038650]: h5py replaced with pickle, 2 functions added for random data generation and output pickle file save (Şeyma Bayrak) #110
- [a3ca5e0]: h5py replaced with pickle (Şeyma Bayrak) #110
- [bfb271c]: styling.. (Şeyma Bayrak) #110
- [7d93b64]: temporary edits: comment out extern repo (Şeyma Bayrak) #110
- [184b03f]: styling, v2 (Şeyma Bayrak) #110
- [5a66b5e]: tmp (Şeyma Bayrak) #110
- [6351a38]: styling 3.. (Şeyma Bayrak) #110
- [11cab0d]: styling 4.. (Şeyma Bayrak) #110
- [2e6ad40]: uncouple data generation from test itself, removing cache file (Şeyma Bayrak) #110
- [fbc8c56]: Merge branch 'master' into datagen_black (Reinder Vos de Wael) #115
- [658423a]: [ENH] First stage of SLM class (Reinder Vos de Wael) #112
- [5788cec]: [ENH] Added (untested) ttest and linearmodel (Reinder Vos de Wael) #112
- [0c1ae7d]: [ENH] Added apply/undo mask. (Reinder Vos de Wael) #112
- [e567f3c]: [TST] Brainstat_utils unit tests (Reinder Vos de Wael) #112
- [e360f78]: [FIX] Fixed test_utils (Reinder Vos de Wael) #112
- [82cba95]: [FIX] Fix undo mask (Reinder Vos de Wael) #112
- [a4aca98]: [FIX] Fix mask funcs (Reinder Vos de Wael) #112
- [8c853f5]: [FIX] Fixed apply and undo mask. (Reinder Vos de Wael) #112
- [64b6939]: [ENH] SLM linear_model implemented (Reinder Vos de Wael) #112
- [07bde1f]: [ENH] t-test operational (Reinder Vos de Wael) #112
- [db643ec]: [ENH] Added fdr and resels (Reinder Vos de Wael) #112
- [021cd30]: [ENH] Added random field theory (Reinder Vos de Wael) #112
- [069a6c6]: [ENH] Added peak_clus (Reinder Vos de Wael) #112
- [092bcb8]: [ENH] Added f-test (Reinder Vos de Wael) #112
- [1e90684]: [TST] Added a basic SLM test (Reinder Vos de Wael) #112
- [7c1e32d]: [FIX] Fixed temporary SLM test (Reinder Vos de Wael) #112
- [fb54a2d]: Merge branch 'master' into matlab_slm (Reinder Vos de Wael) #112
- [1737fa5]: Merge branch 'master' into matlab_slm (Reinder Vos de Wael) #112
- [b384352]: Merge branch 'master' into datagen (Reinder Vos de Wael) #110
- [39dac94]: docs polished in brainstat/mesh/data.py (#126) (Şeyma Bayrak) #126
- [d03bf35]: [REF] Standardize Python/MATLAB nomenclature (#120) (Reinder Vos de Wael) #120
- [db31dd9]: [FIX] CI now works on forks (#128) (#129) (Reinder Vos de Wael) #129
- [e090d9e]: [DOC] Updated the installation guide. (#122) (Reinder Vos de Wael) #122
- [2166217]: [FIX] Fixed installation dependencies (#133) (Reinder Vos de Wael) #133
- Jupyter Notebook
Published by github-actions[bot] almost 5 years ago
brainstat - v0.0.2
Commits
- [b441c33]: [DOC] Tutorial 1 (#81) (Reinder Vos de Wael) #81
- [e129a1f]: [DOC] Fixed docs (Reinder Vos de Wael)
- [6be7526]: [FIX] Fixed a conf.py issue (#98) (Reinder Vos de Wael) #98
- [cfe7869]: [DOC] Slight changes in documentation hierarchy (#96) (Boris Bernhardt) #96
- [b305cb8]: [REF] Homogenized some of the MATLAB directory naming with Python (#99) (Reinder Vos de Wael) #99
- [ec1071f]: [FIX] Fixed conf.py parsing (#103) (Reinder Vos de Wael) #103
- [a0f0206]: [DOC] Updated badge links (#104) (Reinder Vos de Wael) #104
- [7d9ccbc]: [TST] linmod unit tests (Reinder Vos de Wael) #107
- [0f19cc1]: [ENH] SLM class (#100) (Reinder Vos de Wael) #100
- [209fb61]: [TST] Added more SurfStat tests (Reinder Vos de Wael) #107
- [48c48a6]: [TST] Updated azure pipelines (Reinder Vos de Wael) #107
- [91f75b7]: Force azure trigger (Reinder Vos de Wael) #107
- [5a0190f]: [FIX] Fix azure trigger (Reinder Vos de Wael) #107
- [519b2b2]: [FIX] Fix azure again (Reinder Vos de Wael) #107
- [15263da]: [FIX] Fix azure pipelines (Reinder Vos de Wael) #107
- [18a1352]: [FIX] fix test -data import (Reinder Vos de Wael) #107
- [7c7b9a7]: Merge branch 'master' into matlab_unittests (Reinder Vos de Wael) #107
- [ee7ff3c]: [FIX] Added Python Install (Reinder Vos de Wael) #107
- [88d82bb]: Merge branch 'matlabunittests' of github.com:MICA-LAB/BrainStat into matlabunittests (Reinder Vos de Wael) #107
- [0f35bd6]: [FIX] Remove names (Reinder Vos de Wael) #107
- [a7cf348]: [TST] Added all tests (Reinder Vos de Wael) #107
- [97e54d4]: [TST] Fixed resels test (Reinder Vos de Wael) #107
- [5661c2f]: [TST] More specific test_p test input. (Reinder Vos de Wael) #107
- [26e901d]: [TST] Skip SurfStatp test 18 (Reinder Vos de Wael) #107
- [b031883]: [TST] Fix test 18 detection (Reinder Vos de Wael) #107
- [4340c4f]: [FIX] Fixes Python/MATLAB stat_threshold divergence. (#109) (Reinder Vos de Wael) #109
- [49010af]: [Release] 0.0.1-alpha.3 (#111) (Reinder Vos de Wael) #111
- [7cf7dcb]: Merge branch 'master' into matlab_unittests (Reinder Vos de Wael) #107
- [e28a08d]: Merge branch 'master' into matlab_unittests (Reinder Vos de Wael) #107
- [10bc79c]: [TST] Test Github Actions MATLAB (Reinder Vos de Wael) #107
- [52e9068]: Merge branch 'matlabunittests' of github.com:MICA-LAB/BrainStat into matlabunittests (Reinder Vos de Wael) #107
- [91253c5]: [FIX] Fix matlab test data download (Reinder Vos de Wael) #107
- [49555cf]: [FIX] added a matlab source folder (Reinder Vos de Wael) #107
- [38e78d5]: [FIX] Fix source folder (Reinder Vos de Wael) #107
- [eb729d8]: [FIX] Fix source folder (Reinder Vos de Wael) #107
- [f9e425f]: [FIX] Fix source folder (Reinder Vos de Wael) #107
- [7ef9602]: [TST] Remove Azure tests. (Reinder Vos de Wael) #107
- [5ef7d06]: [FIX] Fix YML (Reinder Vos de Wael) #107
- [c3d5e5f]: [GIT] Added MATLAB status badge. (Reinder Vos de Wael) #107
- [95e6060]: [REF] Updated name Python CI to Unit Tests (Reinder Vos de Wael) #107
- [f857aec]: [GIT] Update badges. (Reinder Vos de Wael) #107
- [03c9d1f]: [GIT] Badges... again (Reinder Vos de Wael) #107
- [6fa743b]: [DOC] Added comments to test_precomputed (Reinder Vos de Wael) #107
- [3c17396]: [FIX] Temporary fix for removal of black stable (#114) (Reinder Vos de Wael) #114
- [f0d7a58]: [GIT] Automatic MATLAB Packaging (#113) (Reinder Vos de Wael) #113
- [aa0f8c5]: [GIT] Version bump (#116) (Reinder Vos de Wael) #116
- [93803b5]: [FIX] Fix line 42 (#117) (Reinder Vos de Wael) #117
- [49b7214]: [FIX] Fix tagged release line 46 (#118) (Reinder Vos de Wael) #118
- [08eee86]: [FIX] Fix license push (#119) (Reinder Vos de Wael) #119
- Jupyter Notebook
Published by github-actions[bot] almost 5 years ago
brainstat - v0.0.1-alpha.3
This version updates the stats module to include the SLM class.
- Jupyter Notebook
Published by ReinderVosDeWael almost 5 years ago