dust-cookbook

This cookbook aims to understand variables that are important to dust emissions

https://github.com/projectpythia/dust-cookbook

Science Score: 54.0%

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This cookbook aims to understand variables that are important to dust emissions

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Created over 1 year ago · Last pushed 6 months ago
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Readme License Citation

README.md

Saharan Dust Cookbook

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nightly-build Binder DOI

This Project Pythia Cookbook explores the relationship between Sharan dust aerosols (Bodèlè source) and meteorological variables using Self-Organizing Maps (SOM), Principal Component Analysis (PCA), and Random Forest Regression (RF).

Motivation

Several meteorological and land surface factors have been found to impact Saharan dust emissions and transport. Dust mobilization occurs when surface wind speed of suitable magnitude is above a threshold velocity, often computed based on soil characteristics, vegetation, and solid particles. The purpose of this cookbook is to understand the relationship between dust and some meteorological variables using self-organizing maps (SOM), random forest regression (RF), and principal component analysis (PCA). The question we are really interested in with this cookbook is to know which variables are the most predictive of dust emissions.

For experimenting purpose, we consider PM10 concentration (PM10), 2m temperature (T2), 2m relative humidity (rh2), planetary boundary layer height (PBLH), 10m wind speed (windspeed10m), 925hPa wind speed (windspeed925hPa), horizontal wind at 10m (U10), meridional wind at 10m (V10), and convective rainfall (RAINC). This cookbook seeks to establish a clear relationship between the meteorological variables and dust (PM10).

Authors

Jacob Tindan, Pooja Hari Ambrish, Altug Karakurt, Ali Fallah Acknowledge primary content authors here_

Contributors

Structure

(State one or more sections that will comprise the notebook. E.g., This cookbook is broken up into two main sections - "Foundations" and "Example Workflows." Then, describe each section below.)

Section 1 ( Replace with the title of this section, e.g. "Foundations" )

(Add content for this section, e.g., "The foundational content includes ... ")

Section 2 ( Replace with the title of this section, e.g. "Example workflows" )

(Add content for this section, e.g., "Example workflows include ... ")

Running the Notebooks

You can either run the notebook using Binder or on your local machine.

Running on Binder

The simplest way to interact with a Jupyter Notebook is through Binder, which enables the execution of a Jupyter Book in the cloud. The details of how this works are not important for now. All you need to know is how to launch a Pythia Cookbooks chapter via Binder. Simply navigate your mouse to the top right corner of the book chapter you are viewing and click on the rocket ship icon, (see figure below), and be sure to select “launch Binder”. After a moment you should be presented with a notebook that you can interact with. I.e. you’ll be able to execute and even change the example programs. You’ll see that the code cells have no output at first, until you execute them by pressing {kbd}Shift+{kbd}Enter. Complete details on how to interact with a live Jupyter notebook are described in Getting Started with Jupyter.

Running on Your Own Machine

If you are interested in running this material locally on your computer, you will need to follow this workflow:

(Replace "cookbook-example" with the title of your cookbooks)

  1. Clone the https://github.com/ProjectPythia/cookbook-example repository:

bash git clone https://github.com/ProjectPythia/cookbook-example.git

  1. Move into the cookbook-example directory bash cd cookbook-example
  2. Create and activate your conda environment from the environment.yml file bash conda env create -f environment.yml conda activate cookbook-example
  3. Move into the notebooks directory and start up Jupyterlab bash cd notebooks/ jupyter lab

Owner

  • Name: Project Pythia
  • Login: ProjectPythia
  • Kind: organization
  • Email: projectpythia@ucar.edu
  • Location: United States of America

Community learning resource for Python-based computing in the geosciences

Citation (CITATION.cff)

cff-version: 1.2.0
message: "If you use this cookbook, please cite it as below."
authors:
  # add additional entries for each author -- see https://github.com/citation-file-format/citation-file-format/blob/main/schema-guide.md
  - family-names: Rose
    given-names: Brian E. J.
    orcid: https://orcid.org/0000-0002-9961-3821 # optional
    website: https://github.com/brian-rose # optional
    affiliation: University at Albany (State University of New York) # optional
  - family-names: Kent
    given-names: Julia
    orcid: https://orcid.org/0000-0002-5611-8986
    website: https://github.com/jukent
    affiliation: UCAR/NCAR
  - family-names: Tyle
    given-names: Kevin
    orcid: https://orcid.org/0000-0001-5249-9665
    website: https://github.com/ktyle
    affiliation: University at Albany (State University of New York)
  - family-names: Clyne
    given-names: John
    orcid: https://orcid.org/0000-0003-2788-9017
    website: https://github.com/clyne
    affiliation: UCAR/NCAR
  - family-names: Camron
    given-names: Drew
    orcid: https://orcid.org/0000-0001-7246-6502
    website: https://github.com/dcamron
    affiliation: UCAR/Unidata
  - family-names: Grover
    given-names: Maxwell
    orcid: https://orcid.org/0000-0002-0370-8974
    website: https://github.com/mgrover1
    affiliation: Argonne National Laboratory
  - family-names: Ford
    given-names: Robert R.
    orcid: https://orcid.org/0000-0001-5483-4965
    website: https://github.com/r-ford
    affiliation: University at Albany (State University of New York)
  - family-names: Paul
    given-names: Kevin
    orcid: https://orcid.org/0000-0001-8155-8038
    website: https://github.com/kmpaul
    affiliation: NVIDIA
  - name: "Cookbook Template contributors" # use the 'name' field to acknowledge organizations
    website: "https://github.com/Jtindan/dust-cookbook/graphs/contributors"
title: "Cookbook Template"
abstract: "A sample cookbook description."

GitHub Events

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  • Issue comment event: 2
  • Push event: 65
  • Pull request event: 3
  • Create event: 3
Last Year
  • Issue comment event: 2
  • Push event: 65
  • Pull request event: 3
  • Create event: 3

Dependencies

.github/workflows/nightly-build.yaml actions
.github/workflows/publish-book.yaml actions
.github/workflows/trigger-book-build.yaml actions
.github/workflows/trigger-delete-preview.yaml actions
.github/workflows/trigger-link-check.yaml actions
.github/workflows/trigger-preview.yaml actions
.github/workflows/trigger-replace-links.yaml actions
  • actions/checkout v4 composite
  • jacobtomlinson/gha-find-replace v3 composite
  • stefanzweifel/git-auto-commit-action v5 composite
environment.yml pypi