Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.6%) to scientific vocabulary

Keywords

organisation-tool r r-package

Keywords from Contributors

standards
Last synced: 8 months ago · JSON representation ·

Repository

Basic Info
Statistics
  • Stars: 1
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Topics
organisation-tool r r-package
Created almost 3 years ago · Last pushed 8 months ago
Metadata Files
Readme Contributing License Citation

README.md

Epiverse-TRACE Statistics

This repository stores data and generates visualizations for public statistics about the Epiverse-TRACE project, including package downloads, GitHub metrics, and academic citations.

Overview

The site provides comprehensive analytics and metrics for the Epiverse-TRACE ecosystem:

  • CRAN Statistics: Download counts and trends for Epiverse-TRACE packages published on CRAN
  • GitHub Statistics: Repository stars, followers, and engagement metrics across the organization
  • Citations: Academic papers and publications that cite Epiverse-TRACE packages and the project

Website

The statistics are published as a Quarto website at: https://epiverse-trace.github.io/etstats

Data Sources

The repository contains automated data collection from: - CRAN download logs via cranlogs.r-pkg.org - GitHub API for repository metrics and stargazer data - Curated bibliography files for academic citations

Structure

  • index.qmd - Main page with CRAN download statistics
  • github-statistics.qmd - GitHub metrics and visualizations
  • citations.qmd - Academic citations and references
  • data/ - Raw data files (JSON for GitHub metrics, BibTeX for citations)
  • scripts/ - Data collection and processing scripts

Maintenance

Statistics are automatically updated through GitHub Actions workflows that collect fresh data from APIs and rebuild the site. The statistics get updated on a weekly basis.

Owner

  • Name: Epiverse-TRACE
  • Login: epiverse-trace
  • Kind: organization

Citation (citations.qmd)

---
title: "Citations"
date: "`r Sys.Date()`"
aliases:
  - articles/citations.html
---

```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  echo = FALSE,
  warning = FALSE,
  message = FALSE,
  comment = "#>"
)
```

## Citations of Epiverse as a project

```{r, results='asis'}
b <- tools::bibstyle(
  "by_year",
  fmtPrefix = function(paper) "-",
  .init = TRUE,
  sortKeys = function(refs) rank(purrr::map_chr(unclass(refs), "year"))
)

file.path("data", "citations", "epiverse.bib") |>
  bibtex::read.bib() |>
  purrr::keep(~ attr(unclass(.x), "bibtype") == "Article") |>
  sort(.bibstyle = "by_year", decreasing = TRUE) |>
  format("html", .bibstyle = "by_year") |>
  paste(collapse = "") |>
  cat()
```

## Package citations

```{r, results='asis'}
# Loop over files in inst/extdata/citations
file.path("data", "citations") |>
  list.files(full.names = TRUE) |>
  setdiff(file.path("data", "citations", "epiverse.bib")) |>
  purrr::map_chr(~ knitr::knit_expand(file = "_pkg_citations.Rmd", bibfile = .x)) |>
  knitr::knit(text = _, quiet = TRUE) |>
  cat()
```

GitHub Events

Total
  • Issues event: 10
  • Delete event: 2
  • Issue comment event: 2
  • Push event: 101
  • Pull request review event: 2
  • Pull request review comment event: 1
  • Pull request event: 10
  • Fork event: 1
  • Create event: 6
Last Year
  • Issues event: 10
  • Delete event: 2
  • Issue comment event: 2
  • Push event: 101
  • Pull request review event: 2
  • Pull request review comment event: 1
  • Pull request event: 10
  • Fork event: 1
  • Create event: 6

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 192
  • Total Committers: 2
  • Avg Commits per committer: 96.0
  • Development Distribution Score (DDS): 0.292
Past Year
  • Commits: 73
  • Committers: 2
  • Avg Commits per committer: 36.5
  • Development Distribution Score (DDS): 0.288
Top Committers
Name Email Commits
GitHub Actions a****s@g****m 136
Hugo Gruson B****o 56
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 8 months ago

All Time
  • Total issues: 7
  • Total pull requests: 18
  • Average time to close issues: 6 months
  • Average time to close pull requests: about 20 hours
  • Total issue authors: 3
  • Total pull request authors: 3
  • Average comments per issue: 0.29
  • Average comments per pull request: 0.0
  • Merged pull requests: 14
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 6
  • Pull requests: 12
  • Average time to close issues: 2 months
  • Average time to close pull requests: 2 minutes
  • Issue authors: 2
  • Pull request authors: 3
  • Average comments per issue: 0.17
  • Average comments per pull request: 0.0
  • Merged pull requests: 8
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • jamesmbaazam (5)
  • Bisaloo (1)
  • Degoot-AM (1)
Pull Request Authors
  • Bisaloo (20)
  • chartgerink (3)
  • jamesmbaazam (1)
Top Labels
Issue Labels
Pull Request Labels

Dependencies

.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.4.1 composite
  • actions/checkout v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • dplyr * imports
  • forcats * imports
  • ggplot2 * imports
  • gh * imports
  • here * imports
  • jsonlite * imports
  • knitr * imports
  • purrr * imports
  • rmarkdown * imports
.github/workflows/save-gh-stats.yaml actions
  • actions/checkout v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite