Recent Releases of nutpie
nutpie - v0.15.2
See CHANGELOG.md
What's Changed
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/pymc-devs/nutpie/pull/220
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/pymc-devs/nutpie/pull/221
- Add support for marimo notebooks by @williambdean in https://github.com/pymc-devs/nutpie/pull/224
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/pymc-devs/nutpie/pull/225
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/pymc-devs/nutpie/pull/226
- chore(release): prepare 0.15.2 by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/229
New Contributors
- @williambdean made their first contribution in https://github.com/pymc-devs/nutpie/pull/224
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.15.1...v0.15.2
- Python
Published by aseyboldt 9 months ago
nutpie - v0.15.1
What's Changed
This contains a critical bug fix for pymc models, that use a pm.Data variable with non-contiguous memory layout in the numba backend. Under some circumstances this could lead to incorrect values in the data variable during sampling.
See https://discourse.pymc.io/t/nutpie-panel-data-events-moving/17046 for more details.
New Contributors
- @henrytdsimmons made their first contribution in https://github.com/pymc-devs/nutpie/pull/216
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.15.0...v0.15.1
- Python
Published by aseyboldt 10 months ago
nutpie - v0.15.0
See CHANGELOG.md
New Contributors
- @guspan-tanadi made their first contribution in https://github.com/pymc-devs/nutpie/pull/194
- @WardBrian made their first contribution in https://github.com/pymc-devs/nutpie/pull/205
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.14.3...v0.15.0
- Python
Published by aseyboldt 10 months ago
nutpie - V0.14.3
What's Changed
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/pymc-devs/nutpie/pull/189
- Docs typos by @daniel-saunders-phil in https://github.com/pymc-devs/nutpie/pull/192
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/pymc-devs/nutpie/pull/191
- Masked coupling by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/190
New Contributors
- @daniel-saunders-phil made their first contribution in https://github.com/pymc-devs/nutpie/pull/192
See CHANGELOG.md for details
- Python
Published by aseyboldt about 1 year ago
nutpie - v0.14.0
What's Changed
- Set 'makeinitialpointfn' in 'frompyfunc' to None by default by @tomicapretto in https://github.com/pymc-devs/nutpie/pull/175
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/pymc-devs/nutpie/pull/172
- chore(deps): Bump actions/attest-build-provenance from 1 to 2 by @dependabot in https://github.com/pymc-devs/nutpie/pull/173
- chore(deps): Bump softprops/action-gh-release from 1 to 2 by @dependabot in https://github.com/pymc-devs/nutpie/pull/174
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/pymc-devs/nutpie/pull/178
- chore(deps): Bump uraimo/run-on-arch-action from 2 to 3 by @dependabot in https://github.com/pymc-devs/nutpie/pull/179
- Implement normalizing flow by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/180
New Contributors
- @tomicapretto made their first contribution in https://github.com/pymc-devs/nutpie/pull/175
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.13.4...v0.14.0
- Python
Published by aseyboldt about 1 year ago
nutpie - v0.13.3
What's Changed
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/pymc-devs/nutpie/pull/142
- [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/pymc-devs/nutpie/pull/143
- Add note about returning current results by @AlexAndorra in https://github.com/pymc-devs/nutpie/pull/147
- Fix default argument for backend in compilepymcmodel by @fonnesbeck in https://github.com/pymc-devs/nutpie/pull/151
- chore(deps): Bump uraimo/run-on-arch-action from 2.7.2 to 2.8.1 by @dependabot in https://github.com/pymc-devs/nutpie/pull/158
- Allow configuring of initial point for pymc models by @jessegrabowski in https://github.com/pymc-devs/nutpie/pull/161
- Fix pymc storage of large traces and support var_names to store only some variables by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/165
- Prepare release by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/168
New Contributors
- @jessegrabowski made their first contribution in https://github.com/pymc-devs/nutpie/pull/161
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.13.2...v0.13.3
See also CHANGELOG.md
- Python
Published by aseyboldt about 1 year ago
nutpie - v0.9.2
What's Changed
Just a minor bugfix release
Bugfix
- Handle missing libraries more robustly by @maresb in https://github.com/pymc-devs/nutpie/pull/72
- Handle case where coords from PyMC is
Noneby @aseyboldt in https://github.com/pymc-devs/nutpie/pull/65
Maintenance
- Add dependabot.yml by @maresb in https://github.com/pymc-devs/nutpie/pull/80
- Improve README by @maresb in #66, #69, #70, #71
- Prepare v0.9.2 release by @maresb in https://github.com/pymc-devs/nutpie/pull/86
New Contributors
- @maresb made their first contribution in https://github.com/pymc-devs/nutpie/pull/66
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.9.1...v0.9.2
- Python
Published by maresb about 2 years ago
nutpie - Version 0.9.1
What's Changed
- Prepare push for version 0.9.1 by @lucianopaz in https://github.com/pymc-devs/nutpie/pull/64
New Contributors
- @lucianopaz made their first contribution in https://github.com/pymc-devs/nutpie/pull/64
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.9.0...v0.9.1
- Python
Published by lucianopaz over 2 years ago
nutpie - Version 0.9.0
See Changelog file for details
What's Changed
- Prepare 0.9 release by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/58
- fix makeinitialpoint_fn by @ferrine in https://github.com/pymc-devs/nutpie/pull/61
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.8.1...v0.9.0
- Python
Published by aseyboldt over 2 years ago
nutpie - v0.6.0
This release allow users to sample from stan models using bridgestan.
What's Changed
- Add maturin-upload.yml GH action by @twiecki in https://github.com/pymc-devs/nutpie/pull/29
- Remove --no-index from pip install. by @twiecki in https://github.com/pymc-devs/nutpie/pull/31
- Added type hints and return values to user-facing functions by @fonnesbeck in https://github.com/pymc-devs/nutpie/pull/33
- Remove unnecessary align in the user_data dtype by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/41
- Write the trace in rust and add bridgestan interface by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/42
- Fix shape of stan variables by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/46
- Update README by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/47
- Prepare release by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/48
New Contributors
- @fonnesbeck made their first contribution in https://github.com/pymc-devs/nutpie/pull/33
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.5.1...v0.6.0
- Python
Published by aseyboldt almost 3 years ago
nutpie - Prerelease for v0.6.0
This is the first release to use bridgestan to make it easy to sample Stan models.
In this release we switch the internal backend for storing traces from numpy to arrow (we still return an arviz InferenceData object in nutpie.sample). The trace and sample stats are now written in rust without needing to hold the GIL, so sampling multiple models in parallel is significantly faster.
What's Changed
- Add maturin-upload.yml GH action by @twiecki in https://github.com/pymc-devs/nutpie/pull/29
- Remove --no-index from pip install. by @twiecki in https://github.com/pymc-devs/nutpie/pull/31
- Added type hints and return values to user-facing functions by @fonnesbeck in https://github.com/pymc-devs/nutpie/pull/33
- Remove unnecessary align in the user_data dtype by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/41
- Write the trace in rust and add bridgestan interface by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/42
- Fix shape of stan variables by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/46
- Update README by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/47
New Contributors
- @fonnesbeck made their first contribution in https://github.com/pymc-devs/nutpie/pull/33
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.5.1...v0.6.0-beta
- Python
Published by aseyboldt almost 3 years ago
nutpie - Version 0.5.1
Update rust dependencies.
What's Changed
- Run cargo update by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/26
- Bump versions in Cargo.toml and pyproject.toml by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/28
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.5.0...v0.5.1
- Python
Published by aseyboldt about 3 years ago
nutpie - v0.5.0
What's Changed
- Cargo update by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/17
- Fix error due to move of aeppl to pymc by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/18
- Update to use pytensor by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/20
- Replace aesara with pytensor by @twiecki in https://github.com/pymc-devs/nutpie/pull/24
- Update README with
pm.ZeroSumNormalby @AlexAndorra in https://github.com/pymc-devs/nutpie/pull/15
New Contributors
- @twiecki made their first contribution in https://github.com/pymc-devs/nutpie/pull/24
- @AlexAndorra made their first contribution in https://github.com/pymc-devs/nutpie/pull/15
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.4.0...v0.5.0
- Python
Published by twiecki over 3 years ago
nutpie - Version 0.4.0
Update nuts-rs to version 0.4 and change default number of tuning steps to 300.
What's Changed
- Spelling OCD by @markgoodhead in https://github.com/pymc-devs/nutpie/pull/9
- Add Cargo.lock to repository by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/11
- Add option to store unconstrained draws and update stan interface by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/10
- Update to nuts-rs 0.4 by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/13
- Bump version to 0.4 by @aseyboldt in https://github.com/pymc-devs/nutpie/pull/14
New Contributors
- @markgoodhead made their first contribution in https://github.com/pymc-devs/nutpie/pull/9
- @aseyboldt made their first contribution in https://github.com/pymc-devs/nutpie/pull/11
Full Changelog: https://github.com/pymc-devs/nutpie/compare/v0.2.1...v0.4.0
- Python
Published by aseyboldt over 3 years ago
nutpie - Version 0.2
Add support for pymc models with shared variables, and changing those values after compilation using compiled_model.with_data(foo=new_value).
What's Changed
- Make progress bar optional by @ferrine in https://github.com/aseyboldt/nutpie/pull/8
New Contributors
- @ferrine made their first contribution in https://github.com/aseyboldt/nutpie/pull/8
Full Changelog: https://github.com/aseyboldt/nutpie/compare/v0.1.3...v0.2.0
- Python
Published by aseyboldt over 3 years ago