ArrowSpace: introducing Spectral Indexing for vector search
ArrowSpace: introducing Spectral Indexing for vector search - Published in JOSS (2025)
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Published in Journal of Open Source Software
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Repository
Basic Info
- Host: GitHub
- Owner: Mec-iS
- License: apache-2.0
- Language: Rust
- Default Branch: main
- Size: 4.23 MB
Statistics
- Stars: 6
- Watchers: 0
- Forks: 1
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
ArrowSpace
Fast spectral vector search that finds similarity beyond traditional distance metrics
ArrowSpace is a high-performance Rust library for vector similarity search that goes beyond geometric distance (cosine, L2) by incorporating spectral graph properties, enabling more nuanced similarity matching for scientific and structured data.
ArrowSpace is a data structure library that encapsulates the use of λτ indexing; a novel scoring method that mixes Rayleigh and Laplacian scoring (see RESEARCH.md) for building vector-search-friendly lookup tables with built-in spectral-awareness. This allows better managing of datasets where spectral characteristics are most relevant. It pairs dense, row‑major arrays with per‑row spectral scores (λτ) derived from a Rayleigh-Laplacian score built over items, enabling lambda‑aware similarity, range queries, and composable operations like superposition and element‑wise multiplication over rows. It has been designed to work on datasets where spectral characteristics can be leveraged to find matches that are usually ranked lower by commonly used distance metrics.
Run cargo run --example proteins_lookup for an example about how it compares with cosine similarity.
Usage
```rust use arrowspace::builder::ArrowSpaceBuilder;
// Simple example that works immediately let vectors = vec![ vec![1.0, 2.0, 3.0], vec![2.0, 3.0, 1.0], vec![3.0, 1.0, 2.0], ];
let (aspace, _) = ArrowSpaceBuilder::new() .build(vectors); ```
Requirements
- Rust 1.78+ (edition 2024)
Installation
As a Library Dependency
Add to your Cargo.toml:
toml
[dependencies]
arrowspace = "*"
From Source
bash
git clone https://github.com/Mec-iS/arrowspace-rs
cd arrowspace-rs
cargo build --release
Running Examples
bash
cargo run --example compare_cosine
cargo run --example proteins_lookup
Running Tests
bash
cargo test
Run Bench
$ cargo bench
Minimal usage
Construct an ArrowSpace from rows and compute a synthetic index λτ used in similarities search (spectral search):
- Build λτ‑graph from data (preferred path):
- Use
ArrowSpaceBuilder::new().build(items)to get anArrowSpaceand its Laplacian+Tau mode; the builder will compute per‑row synthetic indices immediately. - Use
ArrowSpaceBuilder::new().with_lambda_graph(...).build(items)to get anArrowSpaceand its Laplacian+Tau mode by specifying the parameters for the graph where the Laplacian is computed. - Use
ArrowSpaceBuilder::new().with_lambdas(...).with_synthesis(...).build(items)to get anArrowSpaceand its Laplacian+Tau indices by specifying which lambdas values to use.
- Use
- Search the space: ```rust use arrowSpace::builder::ArrowSpaceBuilder; use arrowSpace::core::ArrowItem;
// define the search parameters: alpha=1.0 is equivalent to cosine similarity let alpha = 0.7; let beta = 0.3;
// Build ArrowSpace from item vectors let items = vec![ vec![1.0, 2.0, 3.0], // Item 1 vec![2.0, 3.0, 1.0], // Item 2 vec![3.0, 1.0, 2.0], // Item 3 ];
let (aspace, graph) = ArrowSpaceBuilder::new() .withlambdagraph(0.5, 3, 2.0, sigma: 0.25) .build(items);
// prepare query vector let query = aspace.preparequeryitem(vec![1.5, 2.5, 2.0], &graph); // search the space let results = aspace.searchlambdaaware(&query, 1, alpha); println!("{:?}", results);
```
Main Features (spectral graph construction and search)
- Data structure for vector search:
- Lambda+Tau graph from data (default): builds a Laplacian over items from the row matrix, then computes per‑row synthetic λτ using laplacian + TauMode (see paper) with Median policy by default; override via
with_synthesis(alpha, mode)to change α or τ policy. - Direct lambda ε‑graph (lower‑level): constructs a Laplacian from a vector of λ values with ε thresholding and k‑capping, union‑symmetrized CSR; use when supplying external λ instead of synthetic.
- (optional) Hypergraph overlays: build Laplacians from hyperedges (clique expansion, normalized variant) and overlay “boosts” to strengthen pairs; for prebuilt/hypergraph paths, synthetic λ is opt‑in via with_synthesis.
- (optional) Ensembles: parameterized variants (k adjust, radius/ε expand, hypergraph transforms) for graph experimentation while reusing the same data matrix; synthetic λ is computed per chosen base when enabled.
- Lambda+Tau graph from data (default): builds a Laplacian over items from the row matrix, then computes per‑row synthetic λτ using laplacian + TauMode (see paper) with Median policy by default; override via
- Examples:
- End‑to‑end examples: protein‑like lookup with λ‑band range query using a ZSET‑style index; showcases for hypergraph, λ‑graph, and synthetic laplacian + TauMode flows.
- Extensive tests spanning
ArrowSpacealgebra, Rayleigh properties, lambda scale‑invariance, superposition bounds, λ‑graph symmetry and k‑capping semantics, hypergraph correctness, diffusion/random‑walk simulations, fractal integrations, and synthetic λ via Median/Mean/Percentile τ policies.
Key concepts
See paper
Owner
- Name: Lorenzo
- Login: Mec-iS
- Kind: user
- Location: UK
- Company: Free as in Free Software
- Website: http://www.pramantha.net
- Repositories: 92
- Profile: https://github.com/Mec-iS
Python. Rust. Geospatial. Satellite Imaging. RegTech. HealthTech. FinTech. Graph Thinking. ML. @DerwenAI @smartcorelib @HTTP-APIs
JOSS Publication
ArrowSpace: introducing Spectral Indexing for vector search
Tags
embeddings vector database RAG numerical scientific computingCitation (CITATION.cff)
cff-version: "1.2.0"
authors:
- family-names: Moriondo
given-names: Lorenzo
orcid: "https://orcid.org/0000-0002-8804-2963"
doi: 10.5281/zenodo.17213264
message: If you use this software, please cite our article in the
Journal of Open Source Software.
preferred-citation:
authors:
- family-names: Moriondo
given-names: Lorenzo
orcid: "https://orcid.org/0000-0002-8804-2963"
date-published: 2025-09-27
doi: 10.21105/joss.09002
issn: 2475-9066
issue: 113
journal: Journal of Open Source Software
publisher:
name: Open Journals
start: 9002
title: "ArrowSpace: introducing Spectral Indexing for vector search"
type: article
url: "https://joss.theoj.org/papers/10.21105/joss.09002"
volume: 10
title: "ArrowSpace: introducing Spectral Indexing for vector search"
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Last Year
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- Pull request review event: 1
- Pull request event: 7
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Committers
Last synced: 3 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Lorenzo Mec-iS | t****g@g****m | 47 |
| Seth | s****k@g****m | 2 |
| Daniel S. Katz | d****z@i****g | 1 |
| dependabot[bot] | 4****]@u****m | 1 |
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Last synced: 3 months ago
All Time
- Total issues: 10
- Total pull requests: 4
- Average time to close issues: 3 days
- Average time to close pull requests: 8 minutes
- Total issue authors: 2
- Total pull request authors: 4
- Average comments per issue: 0.8
- Average comments per pull request: 0.0
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 1
Past Year
- Issues: 10
- Pull requests: 4
- Average time to close issues: 3 days
- Average time to close pull requests: 8 minutes
- Issue authors: 2
- Pull request authors: 4
- Average comments per issue: 0.8
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Top Authors
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Total downloads:
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- Total versions: 3
- Total maintainers: 1
crates.io: arrowspace
Spectral vector search with taumode (λτ) indexing
- Homepage: https://github.com/Mec-iS/arrowspace-rs
- Documentation: https://docs.rs/arrowspace/
- License: MIT OR Apache-2.0
-
Latest release: 0.5.0
published 3 months ago
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Maintainers (1)
Dependencies
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- smartcore ^0.4.2
