ruby-cff

A Ruby library for creating, editing, validating and converting CITATION.cff files.

https://github.com/rubyonworld/ruby-cff

Science Score: 77.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 3 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Committers with academic emails
    2 of 10 committers (20.0%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (12.8%) to scientific vocabulary

Keywords

citation convert edit ruby validate

Keywords from Contributors

attribution research-software-engineering sustainability
Last synced: 4 months ago · JSON representation ·

Repository

A Ruby library for creating, editing, validating and converting CITATION.cff files.

Basic Info
  • Host: GitHub
  • Owner: RubyOnWorld
  • License: apache-2.0
  • Language: Ruby
  • Default Branch: main
  • Homepage:
  • Size: 741 KB
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  • Watchers: 1
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Topics
citation convert edit ruby validate
Created about 3 years ago · Last pushed about 3 years ago
Metadata Files
Readme Changelog Code of conduct Citation

README.md

Ruby CFF

Robert Haines and The Ruby Citation File Format Developers

A Ruby library for creating, editing, validating and converting CITATION.cff files.

DOI Gem Version Tests Linter Maintainability Coverage Status

Synopsis

This library provides a Ruby interface to create and edit Citation File Format (CFF) files. The resulting files can be validated against a formal schema to ensure correctness and can be output in a number of different citation-friendly formats.

The primary API entry points are the Index and File classes.

See the CITATION.cff documentation for more details about the Citation File Format.

See the full API documentation for more details about Ruby CFF.

Quick start

You can quickly build and save a CFF index like this:

```ruby index = CFF::Index.new('Ruby CFF Library') do |cff| cff.version = CFF::VERSION cff.datereleased = Date.today cff.authors << CFF::Person.new('Robert', 'Haines') cff.license = 'Apache-2.0' cff.keywords << 'ruby' << 'credit' << 'citation' cff.repositoryartifact = 'https://rubygems.org/gems/cff' cff.repository_code = 'https://github.com/citation-file-format/ruby-cff' end

CFF::File.write('CITATION.cff', index) ```

Which will produce a file that looks something like this:

yaml cff-version: 1.2.0 message: If you use this software in your work, please cite it using the following metadata title: Ruby CFF Library authors: - family-names: Haines given-names: Robert keywords: - ruby - credit - citation version: 0.9.0 date-released: 2021-09-28 license: Apache-2.0 repository-artifact: https://rubygems.org/gems/cff repository-code: https://github.com/citation-file-format/ruby-cff

CFF::File can be used to create a file directly, and it exposes the underlying CFF::Index directly. If using a block with CFF::File::open the file will get written on closing it:

ruby CFF::File.open('CITATION.cff') do |cff| cff.version = CFF::VERSION cff.date_released = Date.today cff.authors << CFF::Person.new('Robert', 'Haines') cff.license = 'Apache-2.0' cff.keywords << 'ruby' << 'credit' << 'citation' cff.repository_artifact = 'https://rubygems.org/gems/cff' cff.repository_code = 'https://github.com/citation-file-format/ruby-cff' end

You can read a CFF file quickly with CFF::File::read:

ruby cff = CFF::File.read('CITATION.cff')

And you can read a CFF file from memory with CFF::Index::read or CFF::Index::open - as with CFF::File a block can be passed in to open:

```ruby cffstring = ::File.read('CITATION.cff') cff = CFF::Index.read(cffstring)

CFF::Index.open(cff_string) do |cff| # Edit cff here... end ```

To quickly reference other software from your own CFF file, you can use CFF::Reference.from_cff. This example uses the CFF file from the core CFF repository as a reference for the Ruby CFF repository:

```ruby require 'open-uri'

uri = 'https://raw.githubusercontent.com/citation-file-format/citation-file-format/main/CITATION.cff' other_cff = URI(uri).open.read

ref = CFF::Reference.fromcff(CFF::Index.read(othercff))

CFF::File.open('CITATION.cff') do |cff| cff.references = [ref] end ```

Validating CFF files

To quickly validate a file and raise an error on failure, you can use CFF::File directly:

ruby begin CFF::File.validate!('CITATION.cff') rescue CFF::ValidationError => e # Handle validation errors here... end

Both CFF::File and CFF::Index have instance methods to validate CFF files as well:

ruby cff = CFF::File.read('CITATION.cff') begin cff.validate!(fail_fast: true) rescue CFF::ValidationError => e # Handle validation errors here... end

Non-bang methods (validate) return an array, with true/false at index 0 to indicate pass/fail, and an array of errors at index 1 (if any).

Passing fail_fast: true (default: false) will cause the validator to abort on the first error it encounters and report just that. Only the instance methods on CFF::File and CFF::Index provide the fail_fast option.

The validation methods (both class and instance) on File also validate the filename of a CFF file; in normal circumstances a CFF file should be named 'CITATION.cff'. You can switch this behaviour off by passing fail_on_filename: false. The non-bang methods (validate) on File return an extra value in the result array: true/false at index 2 to indicate whether the filename passed/failed validation.

Outputting citation text

This library can use CFF data to output text suitable for use when citing software. Currently the output formats supported are:

  • BibTeX; and
  • an APA-like format.

You can use this feature as follows: ```ruby cff = CFF::File.read('CITATION.cff')

cff.tobibtex cff.toapalike ```

These methods assume that the CFF data is valid - see the notes on validation above.

Assuming the same CFF data as above, the two formats will look something like this:

BibTeX format

tex @software{Haines_Ruby_CFF_Library_2021, author = {Haines, Robert}, license = {Apache-2.0}, month = {9}, title = {{Ruby CFF Library}}, url = {https://github.com/citation-file-format/ruby-cff}, version = {0.9.0}, year = {2021} }

APA-like format

Haines, R. (2021). Ruby CFF Library (Version 0.9.0) [Computer software]. https://github.com/citation-file-format/ruby-cff

Citing a paper rather than software

The CFF has been designed with direct citation of software in mind. We'd like software to be considered a first-class research output, like journal articles and conference papers. If you would rather that your citation text points to a paper that describes your software, rather than the software itself, you can use the preferred-citation field for that paper. When producing citation text this library will honour preferred-citation, if present, by default. If you would like to specify a preferred-citation and still produce a direct citation to the software then you can configure the formatter as follows:

```ruby cff = CFF::File.read('CITATION.cff')

cff.tobibtex(preferredcitation: false) cff.toapalike(preferredcitation: false)

```

A note on citation formats

Due to the different expectations of different publication venues, the citation text may need minor tweaking to be used in specific situations. If you spot a major, or general, error in the output do let us know, but please check against the BibTex and APA standards first.

Library versions

Until this library reaches version 1.0.0 the API may be subject to breaking changes. When version 1.0.0 is released, then the principles of semantic versioning will be applied.

Licence

Apache 2.0. See LICENCE for details.

Research notice

Please note that this repository is participating in a study into sustainability of open source projects. Data will be gathered about this repository for approximately the next 12 months, starting from June 2021.

Data collected will include number of contributors, number of PRs, time taken to close/merge these PRs, and issues closed.

For more information, please visit our informational page or download our participant information sheet.

Owner

  • Name: Ruby On World
  • Login: RubyOnWorld
  • Kind: organization
  • Email: rubyonworld@yahoo.com
  • Location: United States of America

Live and Breathe Ruby and Rails!

Citation (CITATION.cff)

# This CITATION.cff file was created by ruby-cff (v 0.9.0).
# Gem: https://rubygems.org/gems/cff
# CFF: https://citation-file-format.github.io/

cff-version: 1.2.0
message: If you use ruby-cff in your work, please cite it using the following metadata
title: Ruby CFF Library
abstract: This library provides a Ruby interface to manipulate Citation File Format files
authors:
- family-names: Haines
  given-names: Robert
  orcid: https://orcid.org/0000-0002-9538-7919
  affiliation: The University of Manchester, UK
- name: The Ruby Citation File Format Developers
keywords:
- ruby
- credit
- software citation
- research software
- software sustainability
- metadata
- citation file format
- CFF
version: 0.9.0
doi: 10.5281/zenodo.1184077
date-released: 2021-08-18
license: Apache-2.0
repository-artifact: https://rubygems.org/gems/cff
repository-code: https://github.com/citation-file-format/ruby-cff
references:
- type: software
  title: Citation File Format
  authors:
  - family-names: Druskat
    given-names: Stephan
    orcid: https://orcid.org/0000-0003-4925-7248
  - family-names: Spaaks
    given-names: Jurriaan H.
    orcid: https://orcid.org/0000-0002-7064-4069
  - family-names: Chue Hong
    given-names: Neil
    orcid: https://orcid.org/0000-0002-8876-7606
  - family-names: Haines
    given-names: Robert
    orcid: https://orcid.org/0000-0002-9538-7919
  - family-names: Baker
    given-names: James
    orcid: https://orcid.org/0000-0002-2682-6922
  - family-names: Bliven
    given-names: Spencer
    orcid: https://orcid.org/0000-0002-1200-1698
    email: spencer.bliven@gmail.com
  - family-names: Willighagen
    given-names: Egon
    orcid: https://orcid.org/0000-0001-7542-0286
  - family-names: Pérez-Suárez
    given-names: David
    orcid: https://orcid.org/0000-0003-0784-6909
    website: https://dpshelio.github.io
  - family-names: Konovalov
    given-names: Alexander
    orcid: https://orcid.org/0000-0001-5299-3292
  identifiers:
  - type: doi
    value: 10.5281/zenodo.1003149
    description: The concept DOI for the collection containing all versions of the Citation File Format.
  - type: doi
    value: 10.5281/zenodo.5171937
    description: The versioned DOI for the version 1.2.0 of the Citation File Format.
  keywords:
  - citation file format
  - CFF
  - citation files
  - software citation
  - file format
  - YAML
  - software sustainability
  - research software
  - credit
  abstract: CITATION.cff files are plain text files with human- and machine-readable citation information for software. Code developers can include them in their repositories to let others know how to correctly cite their software. This is the specification for the Citation File Format.
  date-released: 2021-08-09
  license: CC-BY-4.0
  version: 1.2.0

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Name Email Commits
Robert Haines r****s@m****k 424
Patrick Dinger p****s@g****m 23
Arfon Smith a****n@g****m 9
Jonathan Chan j****z@c****a 4
HParker H****r@g****m 2
Yo Yehudi y****h@g****m 1
Thomas Morrell t****l 1
Stephan Druskat s****t 1
Oliver Strickson o****2 1
Dorian Marié d****n@d****r 1
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