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sog-bloomcast-ensemble

Successor to the SoG-bloomcast project that uses an ensemble forecast.

https://github.com/salishseacast/sog-bloomcast-ensemble

Science Score: 62.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    2 of 5 committers (40.0%) from academic institutions
  • ✓
    Institutional organization owner
    Organization salishseacast has institutional domain (salishsea.eos.ubc.ca)
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (7.3%) to scientific vocabulary

Keywords

ocean-modelling oceanography phytoplankton salishsea salishseacast

Keywords from Contributors

interactive archival mesh interpretability sequences generic projection optim hacking network-simulation
Last synced: 6 months ago · JSON representation ·

Repository

Successor to the SoG-bloomcast project that uses an ensemble forecast.

Basic Info
Statistics
  • Stars: 2
  • Watchers: 1
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Topics
ocean-modelling oceanography phytoplankton salishsea salishseacast
Created about 6 years ago · Last pushed 6 months ago
Metadata Files
Readme License Citation

README.rst 

*******************************************************
SoG-bloomcast - Strait of Georgia Spring Bloom Forecast
*******************************************************
:Author: Doug Latornell 
:License: Apache License, Version 2.0

SoG-bloomcast is a an operational oceanography project to provide daily updated forecasts of the first spring phytoplankton bloom in the Strait of Georgia on the British Columbia south coast.
In addition to being part of an active research program on the physics and biogeochemistry of the Salish Sea,
SoG-bloomcast is intended as a demonstration of how small university research groups can use lightweight software automation to publish near-real-time model results to the web.

SoG-bloomcast uses the SOG coupled physics-biogeochemical model for deep estuaries
(https://github.com/SalishSeaCast/SOG)
to do its science,
and publishes its results to the web at https://salishsea.eos.ubc.ca/bloomcast/spring_diatoms.

SoG-bloomcast is written in Python.


License
=======

The SoG-bloomcast code and documentation are copyright 2011-present by Doug Latornell and The University of British Columbia.

They are licensed under the Apache License, Version 2.0.
http://www.apache.org/licenses/LICENSE-2.0
Please see the LICENSE and CITATION files for details of the license,
and how to cite the SoG-bloomcast project.

Owner

  • Name: SalishSeaCast
  • Login: SalishSeaCast
  • Kind: organization
  • Location: Vancouver, Canada

A three-dimensional physical-biological-chemical ocean model for the Strait of Georgia and Salish Sea

Citation (CITATION) 

SoG-bloomcast -- Operational Forecasting of Spring Phytoplankton Blooms in the Strait of Georgia
Copyright 2011-2021 Doug Latornell and The University of British Columbia

This product includes software developed at
The Earth, Ocean, and Atmospheric Sciences Department of
The Univeristy of British Columbia (http://www.eos.ubc.ca).

To cite the SoG-bloomcast project please use the bibliographic information for one
or more of the following publications:

Latornell, D.J. and Allen, S.E.
Operational Prediction of the Strait of Georgia Spring Diatom Bloom.
Ocean Sciences Meeting, 2014.

Allen, S.E. and M.A. Wolfe.
Hindcast of the timing of the spring phytoplankton bloom in the Strait of Georgia, 1968-2010.
Progress in Oceanography. Volume 115, Pages 6-13, 2013.
http://dx.doi.org/10.1016/j.pocean.2013.05.026

Collins, A.K., S.E. Allen, and R. Pawlowicz.
The role of wind in determining the timing of the spring bloom in the Strait of Georgia.
Canadian Journal of Fisheries and Aquatic Sciences, Volume 66, Pages 1597-1616, 2009.
http://www.nrcresearchpress.com/doi/abs/10.1139/f09-071

GitHub Events

Total
  • Issues event: 3
  • Delete event: 15
  • Issue comment event: 10
  • Push event: 26
  • Pull request event: 26
  • Create event: 15
Last Year
  • Issues event: 3
  • Delete event: 15
  • Issue comment event: 10
  • Push event: 26
  • Pull request event: 26
  • Create event: 15

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 558
  • Total Committers: 5
  • Avg Commits per committer: 111.6
  • Development Distribution Score (DDS): 0.181
Past Year
  • Commits: 27
  • Committers: 2
  • Avg Commits per committer: 13.5
  • Development Distribution Score (DDS): 0.296
Top Committers
Name Email Commits
Doug Latornell d****l@d****a 457
dependabot[bot] 4****] 45
Doug Latornell d****l@e****a 29
Doug Latornell d****l@e****a 26
Ben Moore-Maley 1****y 1
Committer Domains (Top 20 + Academic)
eoas.ubc.ca: 2 douglatornell.ca: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 3
  • Total pull requests: 64
  • Average time to close issues: over 1 year
  • Average time to close pull requests: 5 days
  • Total issue authors: 1
  • Total pull request authors: 3
  • Average comments per issue: 0.33
  • Average comments per pull request: 0.25
  • Merged pull requests: 55
  • Bot issues: 0
  • Bot pull requests: 58
Past Year
  • Issues: 1
  • Pull requests: 11
  • Average time to close issues: N/A
  • Average time to close pull requests: about 14 hours
  • Issue authors: 1
  • Pull request authors: 3
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.73
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 5
View more stats
Top Authors
Issue Authors
  • douglatornell (3)
Pull Request Authors
  • dependabot[bot] (68)
  • douglatornell (6)
  • pre-commit-ci[bot] (1)
Top Labels
Issue Labels
maintenance (2) documentation (1) bug (1)
Pull Request Labels
dependencies (68) python (4) bug (3) maintenance (2)

Dependencies

requirements.txt pypi
  • Babel ==2.9.1
  • Jinja2 ==3.0.3
  • MarkupSafe ==2.1.0
  • Pillow ==9.0.1
  • PyQt5 ==5.12.3
  • PyQt5_sip ==4.19.18
  • PyQtChart ==5.12
  • PyQtWebEngine ==5.12.1
  • PySocks ==1.7.1
  • PyYAML ==6.0
  • Pygments ==2.11.2
  • Send2Trash ==1.8.0
  • Sphinx ==4.4.0
  • alabaster ==0.7.12
  • anyio ==3.5.0
  • argon2-cffi ==21.3.0
  • argon2-cffi-bindings ==21.2.0
  • arrow ==1.2.2
  • asttokens ==2.0.5
  • attrs ==21.4.0
  • autopage ==0.5.0
  • backcall ==0.2.0
  • backports.functools-lru-cache ==1.6.4
  • beautifulsoup4 ==4.10.0
  • bleach ==4.1.0
  • brotlipy ==0.7.0
  • certifi ==2021.10.8
  • cffi ==1.15.0
  • charset-normalizer ==2.0.12
  • cliff ==3.10.1
  • cmd2 ==2.3.3
  • colander ==1.5.1
  • colorama ==0.4.4
  • cryptography ==36.0.1
  • cycler ==0.11.0
  • debugpy ==1.5.1
  • decorator ==5.1.1
  • defusedxml ==0.7.1
  • docutils ==0.17.1
  • entrypoints ==0.4
  • executing ==0.8.3
  • flit_core ==3.7.1
  • fonttools ==4.29.1
  • idna ==3.3
  • imagesize ==1.3.0
  • importlib-metadata ==4.11.2
  • importlib-resources ==5.4.0
  • iniconfig ==1.1.1
  • ipykernel ==6.9.1
  • ipython ==8.1.1
  • ipython-genutils ==0.2.0
  • iso8601 ==1.0.2
  • jedi ==0.18.1
  • json5 ==0.9.5
  • jsonschema ==4.4.0
  • jupyter-client ==7.1.2
  • jupyter-core ==4.9.2
  • jupyter-server ==1.15.4
  • jupyterlab ==3.3.0
  • jupyterlab-pygments ==0.1.2
  • jupyterlab-server ==2.10.3
  • kiwisolver ==1.3.2
  • matplotlib ==3.5.1
  • matplotlib-inline ==0.1.3
  • mistune ==2.0.3
  • munkres ==1.1.4
  • nbclassic ==0.3.6
  • nbclient ==0.5.11
  • nbconvert ==6.4.2
  • nbformat ==5.1.3
  • nest-asyncio ==1.5.4
  • notebook ==6.4.12
  • notebook-shim ==0.1.0
  • numpy ==1.22.2
  • packaging ==21.3
  • pandocfilters ==1.5.0
  • parso ==0.8.3
  • pbr ==5.8.1
  • pexpect ==4.8.0
  • pickleshare ==0.7.5
  • pip ==22.0.3
  • pluggy ==1.0.0
  • prettytable ==3.1.1
  • prometheus-client ==0.13.1
  • prompt-toolkit ==3.0.27
  • ptyprocess ==0.7.0
  • pure-eval ==0.2.2
  • py ==1.11.0
  • pyOpenSSL ==22.0.0
  • pycparser ==2.21
  • pyparsing ==3.0.7
  • pyperclip ==1.8.2
  • pyrsistent ==0.18.1
  • pytest ==7.0.1
  • python-dateutil ==2.8.2
  • pytz ==2021.3
  • pyzmq ==22.3.0
  • requests ==2.27.1
  • setuptools ==60.9.3
  • six ==1.16.0
  • sniffio ==1.2.0
  • snowballstemmer ==2.2.0
  • soupsieve ==2.3.1
  • sphinx-rtd-theme ==1.0.0
  • sphinxcontrib-applehelp ==1.0.2
  • sphinxcontrib-devhelp ==1.0.2
  • sphinxcontrib-htmlhelp ==2.0.0
  • sphinxcontrib-jsmath ==1.0.1
  • sphinxcontrib-qthelp ==1.0.3
  • sphinxcontrib-serializinghtml ==1.1.5
  • stack-data ==0.2.0
  • stevedore ==3.5.0
  • terminado ==0.13.2
  • testpath ==0.6.0
  • tomli ==2.0.1
  • tornado ==6.1
  • traitlets ==5.1.1
  • translationstring ==1.4
  • typing_extensions ==4.1.1
  • unicodedata2 ==14.0.0
  • urllib3 ==1.26.8
  • wcwidth ==0.2.5
  • webencodings ==0.5.1
  • websocket-client ==1.3.1
  • wheel ==0.37.1
  • zipp ==3.7.0
setup.py pypi
  • BeautifulSoup4 *
  • PyYAML *
  • Use *
  • and *
  • arrow *
  • cliff *
  • matplotlib *
  • numpy *
  • requests *
environment.yml pypi