genome-mining-workshop
Genome Mining Workshop Overview
https://github.com/carpentries-incubator/genome-mining-workshop
Science Score: 77.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
8 of 66 committers (12.1%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.9%) to scientific vocabulary
Keywords
alpha
carpentries-incubator
english
genome-mining
lesson
Keywords from Contributors
stable
beta
life-sciences
pre-alpha
jekyll
github-pages
carpentries-lab
metagenomics
prediction
data-leakage
Last synced: 7 months ago
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JSON representation
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Repository
Genome Mining Workshop Overview
Basic Info
- Host: GitHub
- Owner: carpentries-incubator
- License: other
- Language: Python
- Default Branch: gh-pages
- Homepage: https://carpentries-incubator.github.io/genome-mining-workshop/
- Size: 71.4 MB
Statistics
- Stars: 1
- Watchers: 5
- Forks: 1
- Open Issues: 1
- Releases: 0
Topics
alpha
carpentries-incubator
english
genome-mining
lesson
Created about 3 years ago
· Last pushed about 1 year ago
Metadata Files
Readme
Contributing
License
Code of conduct
Citation
Authors
Zenodo
README.md
Genome Mining Workshop Overview
Overview page of the Genome Mining Workshop that comprises the lessons:
Funding
Thanks to PAPIIT IA106323 “Pan-cluster, herramientas de Big data para caracterización pangenómica de clústeres biosintéticos en microorganismos” for the funds provided that made the development of this lesson possible.
Links
Zenodo link: 
Code of Conduct
All participants should agree to abide by The Carpentries Code of Conduct.
Maintainer(s)
Current maintainers of this lesson are
Authors
- Nelly Sélem Mojica
- Claudia Zirión Martínez
- Andrés Arredondo Cruz
- Paulina Mayell Mejía Ponce
- Diego Garfias Gallegos
- Haydee Contreras
- Shaday Guerrero Flores
- Aaron Jaime
- Abel Lovaco
- Shaday Flores
- Mario Jardón
- Karina Ochoa
- Anton Pashkov
- Rafael Pérez
- Miguel Magaña
- Axel Alejandro Ramos
- Zaki Santamaria
A list of contributors to the lesson can be found in AUTHORS
Citation
Please cite as:
Symbols:
💢 When there are things to fix
❓ When there is information that needs to be verified
✳️ When something needs to be developed
Owner
- Name: carpentries-incubator
- Login: carpentries-incubator
- Kind: organization
- Repositories: 107
- Profile: https://github.com/carpentries-incubator
Citation (CITATION)
Please cite as: Nelly Sélem Mojica; Diego Garfias Gallegos; Claudia Zirión Martínez; Jesús Abraham Avelar Rivas; Aaron Jaime Espinosa; Abel Lovaco Flores; Tania Vanessa Arellano Fernandez (2022, Jan). Metagenomics for Software Carpentry lesson, Jan 2022. Zenodo. https://doi.org/10.5281/zenodo.4285900
GitHub Events
Total
- Issues event: 1
- Watch event: 1
- Push event: 2
Last Year
- Issues event: 1
- Watch event: 1
- Push event: 2
Committers
Last synced: about 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| Greg Wilson | g****n@t****m | 95 |
| Nelly Sélem | n****5@h****m | 84 |
| Erin Becker | e****r@g****m | 78 |
| François Michonneau | f****u@g****m | 74 |
| Raniere Silva | r****e@r****m | 65 |
| Czirion | 7****n | 65 |
| Tracy Teal | t****t@i****g | 43 |
| Abigail Cabunoc | a****c@o****a | 25 |
| Raniere Silva | r****e@i****r | 24 |
| Maxim Belkin | m****n@g****m | 23 |
| J. Abel Lovaco | 6****4 | 17 |
| Bob Freeman PhD | r****n@h****u | 14 |
| maneesha sane | m****e@g****m | 13 |
| Katrin Leinweber | k****i@p****e | 8 |
| JasonJWilliamsNY | J****Y@g****m | 6 |
| Rémi Emonet | r****t@r****e | 5 |
| David Mawdsley | d****y@m****k | 4 |
| Camila Silva | 8****5 | 4 |
| Piotr Banaszkiewicz | p****r@b****g | 4 |
| Bianca Peterson | b****7@g****m | 4 |
| Taylor Reiter | t****r@g****m | 4 |
| Toby Hodges | t****s@g****m | 4 |
| aaronejaime | 4****e | 3 |
| William L. Close | w****e | 3 |
| Michael R. Crusoe | 1****c | 3 |
| Raniere Silva | r****7@i****r | 2 |
| evanwill | e****w@g****m | 2 |
| murraycadzow | m****w@o****z | 2 |
| Nick Young | n****2@g****m | 2 |
| Brandon Curtis | b****s@g****m | 2 |
| and 36 more... | ||
Committer Domains (Top 20 + Academic)
ime.unicamp.br: 2
third-bit.com: 1
rgaiacs.com: 1
idyll.org: 1
oicr.on.ca: 1
hbs.edu: 1
posteo.de: 1
reverse--com.heeere: 1
manchester.ac.uk: 1
banaszkiewicz.org: 1
otago.ac.nz: 1
llnl.gov: 1
utoronto.ca: 1
wisc.edu: 1
email.arizona.edu: 1
tremily.us: 1
brown.edu: 1
envs.au.dk: 1
poisotlab.io: 1
software-carpentry.org: 1
asu.edu: 1
Issues and Pull Requests
Last synced: 7 months ago
All Time
- Total issues: 2
- Total pull requests: 0
- Average time to close issues: 21 days
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 0.5
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- tobyhodges (2)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Dependencies
Gemfile
rubygems
- github-pages >= 0 development