genome-mining-workshop
Genome Mining Workshop Overview
https://github.com/carpentries-incubator/genome-mining-workshop
Science Score: 77.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
8 of 66 committers (12.1%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.9%) to scientific vocabulary
Keywords
alpha
carpentries-incubator
english
genome-mining
lesson
Keywords from Contributors
stable
beta
life-sciences
pre-alpha
jekyll
github-pages
carpentries-lab
metagenomics
prediction
data-leakage
Last synced: 6 months ago
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JSON representation
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Repository
Genome Mining Workshop Overview
Basic Info
- Host: GitHub
- Owner: carpentries-incubator
- License: other
- Language: Python
- Default Branch: gh-pages
- Homepage: https://carpentries-incubator.github.io/genome-mining-workshop/
- Size: 71.4 MB
Statistics
- Stars: 1
- Watchers: 5
- Forks: 1
- Open Issues: 1
- Releases: 0
Topics
alpha
carpentries-incubator
english
genome-mining
lesson
Created about 3 years ago
· Last pushed 11 months ago
Metadata Files
Readme
Contributing
License
Code of conduct
Citation
Authors
Zenodo
README.md
Genome Mining Workshop Overview
Overview page of the Genome Mining Workshop that comprises the lessons:
Funding
Thanks to PAPIIT IA106323 “Pan-cluster, herramientas de Big data para caracterización pangenómica de clústeres biosintéticos en microorganismos” for the funds provided that made the development of this lesson possible.
Links
Zenodo link: 
Code of Conduct
All participants should agree to abide by The Carpentries Code of Conduct.
Maintainer(s)
Current maintainers of this lesson are
Authors
- Nelly Sélem Mojica
- Claudia Zirión Martínez
- Andrés Arredondo Cruz
- Paulina Mayell Mejía Ponce
- Diego Garfias Gallegos
- Haydee Contreras
- Shaday Guerrero Flores
- Aaron Jaime
- Abel Lovaco
- Shaday Flores
- Mario Jardón
- Karina Ochoa
- Anton Pashkov
- Rafael Pérez
- Miguel Magaña
- Axel Alejandro Ramos
- Zaki Santamaria
A list of contributors to the lesson can be found in AUTHORS
Citation
Please cite as:
Symbols:
💢 When there are things to fix
❓ When there is information that needs to be verified
✳️ When something needs to be developed
Owner
- Name: carpentries-incubator
- Login: carpentries-incubator
- Kind: organization
- Repositories: 107
- Profile: https://github.com/carpentries-incubator
Citation (CITATION)
Please cite as: Nelly Sélem Mojica; Diego Garfias Gallegos; Claudia Zirión Martínez; Jesús Abraham Avelar Rivas; Aaron Jaime Espinosa; Abel Lovaco Flores; Tania Vanessa Arellano Fernandez (2022, Jan). Metagenomics for Software Carpentry lesson, Jan 2022. Zenodo. https://doi.org/10.5281/zenodo.4285900
GitHub Events
Total
- Issues event: 1
- Watch event: 1
- Push event: 2
Last Year
- Issues event: 1
- Watch event: 1
- Push event: 2
Committers
Last synced: 12 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Greg Wilson | g****n@t****m | 95 |
| Nelly Sélem | n****5@h****m | 84 |
| Erin Becker | e****r@g****m | 78 |
| François Michonneau | f****u@g****m | 74 |
| Raniere Silva | r****e@r****m | 65 |
| Czirion | 7****n | 65 |
| Tracy Teal | t****t@i****g | 43 |
| Abigail Cabunoc | a****c@o****a | 25 |
| Raniere Silva | r****e@i****r | 24 |
| Maxim Belkin | m****n@g****m | 23 |
| J. Abel Lovaco | 6****4 | 17 |
| Bob Freeman PhD | r****n@h****u | 14 |
| maneesha sane | m****e@g****m | 13 |
| Katrin Leinweber | k****i@p****e | 8 |
| JasonJWilliamsNY | J****Y@g****m | 6 |
| Rémi Emonet | r****t@r****e | 5 |
| David Mawdsley | d****y@m****k | 4 |
| Camila Silva | 8****5 | 4 |
| Piotr Banaszkiewicz | p****r@b****g | 4 |
| Bianca Peterson | b****7@g****m | 4 |
| Taylor Reiter | t****r@g****m | 4 |
| Toby Hodges | t****s@g****m | 4 |
| aaronejaime | 4****e | 3 |
| William L. Close | w****e | 3 |
| Michael R. Crusoe | 1****c | 3 |
| Raniere Silva | r****7@i****r | 2 |
| evanwill | e****w@g****m | 2 |
| murraycadzow | m****w@o****z | 2 |
| Nick Young | n****2@g****m | 2 |
| Brandon Curtis | b****s@g****m | 2 |
| and 36 more... | ||
Committer Domains (Top 20 + Academic)
ime.unicamp.br: 2
third-bit.com: 1
rgaiacs.com: 1
idyll.org: 1
oicr.on.ca: 1
hbs.edu: 1
posteo.de: 1
reverse--com.heeere: 1
manchester.ac.uk: 1
banaszkiewicz.org: 1
otago.ac.nz: 1
llnl.gov: 1
utoronto.ca: 1
wisc.edu: 1
email.arizona.edu: 1
tremily.us: 1
brown.edu: 1
envs.au.dk: 1
poisotlab.io: 1
software-carpentry.org: 1
asu.edu: 1
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 2
- Total pull requests: 0
- Average time to close issues: 21 days
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 0.5
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- tobyhodges (2)
Pull Request Authors
Top Labels
Issue Labels
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Dependencies
Gemfile
rubygems
- github-pages >= 0 development