impact-of-phage-enrichment-on-the-observed-infant-gut-phageome
Repository for data availability
https://github.com/sanrrone/impact-of-phage-enrichment-on-the-observed-infant-gut-phageome
Science Score: 49.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.7%) to scientific vocabulary
Last synced: 6 months ago
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JSON representation
Repository
Repository for data availability
Basic Info
- Host: GitHub
- Owner: Sanrrone
- License: mit
- Language: R
- Default Branch: main
- Size: 120 MB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 5
Created about 1 year ago
· Last pushed 6 months ago
Metadata Files
Readme
License
Citation
README.md
Impact-of-phage-enrichment-on-the-observed-infant-gut-phageome
Repository for pure data availability.
contigs
Folder containing all phage contigs mined and filtered per baby.
slurm_scripts
Folder containing the scripts used in this study under a HPC platform with slurm as workload manager.
completeviraltable.zip
All the information extracted from the contigs.
seqcleaner.py
Script used to decontaminate HumGutDB using UHGV.
supplementary_table1-3
Supplementary table used in this study with all the metadata per sample.
Owner
- Name: Sandro Valenzuela
- Login: Sanrrone
- Kind: user
- Repositories: 2
- Profile: https://github.com/Sanrrone
GitHub Events
Total
- Release event: 4
- Push event: 29
- Create event: 6
Last Year
- Release event: 4
- Push event: 29
- Create event: 6