Recent Releases of obook

obook - First OBOOK release (for archiving purposes)

What's Changed

  • Added outline for week 2 by @matentzn in https://github.com/OBOAcademy/obook/pull/1
  • Update automation.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/2
  • Update scientific-computing.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/3
  • Some typos in scientific computing by @matentzn in https://github.com/OBOAcademy/obook/pull/4
  • minor typos by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/8
  • Update linked-data.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/6
  • minor typo by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/10
  • minor typo by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/9
  • fix apostrophe by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/11
  • fix minor typos by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/12
  • Update linked-data.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/7
  • fix typos by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/13
  • Kg phen dis by @matentzn in https://github.com/OBOAcademy/obook/pull/17
  • fix sourceforge->github for idobru by @cmungall in https://github.com/OBOAcademy/obook/pull/19
  • Update installelk0.5_protege.md by @emquardokus in https://github.com/OBOAcademy/obook/pull/26
  • Update contributingtoobo_ontologies.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/30
  • Added link for Ontologies 101 Tutorial by @shawntanzk in https://github.com/OBOAcademy/obook/pull/34
  • Update ontology-curator.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/37
  • Fix typo by @cthoyt in https://github.com/OBOAcademy/obook/pull/39
  • Small typo fix in doc navigation by @beckyjackson in https://github.com/OBOAcademy/obook/pull/42
  • Fix link to animals2.tsv by @caufieldjh in https://github.com/OBOAcademy/obook/pull/46
  • Fix a couple typos by @caufieldjh in https://github.com/OBOAcademy/obook/pull/47
  • New Lesson: How to manage an effective Ontology Project by @matentzn in https://github.com/OBOAcademy/obook/pull/51
  • Fix incorrect link for 'Install ELK 0.5' by @rays22 in https://github.com/OBOAcademy/obook/pull/54
  • Create git_faq.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/55
  • Update owlformatsvariants.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/56
  • Add repo_url to mkdocs by @cmungall in https://github.com/OBOAcademy/obook/pull/57
  • noctua is not a tool like the others by @cmungall in https://github.com/OBOAcademy/obook/pull/59
  • Adding note about ontobee difference, doesn't show hierarcjical relat… by @cmungall in https://github.com/OBOAcademy/obook/pull/64
  • Update dosdp_template.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/67
  • Fhkb formatting by @shawntanzk in https://github.com/OBOAcademy/obook/pull/71
  • FHKB Tutorial to Markdown by @matentzn in https://github.com/OBOAcademy/obook/pull/69
  • Adding FHKB by @matentzn in https://github.com/OBOAcademy/obook/pull/72
  • Small spelling fix by @joeflack4 in https://github.com/OBOAcademy/obook/pull/73
  • Fix issues with Markdown conversion by @kimrutherford in https://github.com/OBOAcademy/obook/pull/74
  • Add tip on how to filter text files by @rays22 in https://github.com/OBOAcademy/obook/pull/76
  • Update troubleshooting document by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/77
  • updated format and image size by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/78
  • Update contributingtoobo_ontologies.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/80
  • remove out of date section by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/85
  • Update contributingtoobo_ontologies.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/86
  • add new example by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/87
  • Update Ubergraph endpoint to new location by @balhoff in https://github.com/OBOAcademy/obook/pull/102
  • Create dosdponODKquickguide.md by @dosumis in https://github.com/OBOAcademy/obook/pull/89
  • Migration from odk docs by @matentzn in https://github.com/OBOAcademy/obook/pull/96
  • Adding link to Nomi's intro to github slides by @cmungall in https://github.com/OBOAcademy/obook/pull/108
  • Adding examples by @cmungall in https://github.com/OBOAcademy/obook/pull/107
  • GO-style make heavy use of equivalence axioms by @cmungall in https://github.com/OBOAcademy/obook/pull/106
  • Create edit-in-protege.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/112
  • added disjointness tutorial by @shawntanzk in https://github.com/OBOAcademy/obook/pull/116
  • Made changes to curator pathway by @shawntanzk in https://github.com/OBOAcademy/obook/pull/111
  • add dl query tutorial by @shawntanzk in https://github.com/OBOAcademy/obook/pull/115
  • added reference docs for annotations by @shawntanzk in https://github.com/OBOAcademy/obook/pull/131
  • Updated text to include some potential pitfalls by @Daniel-Olson in https://github.com/OBOAcademy/obook/pull/132
  • adding Bradley to editorial team by @shawntanzk in https://github.com/OBOAcademy/obook/pull/134
  • Intro to ontologies by @shawntanzk in https://github.com/OBOAcademy/obook/pull/133
  • proofreading edits in https://github.com/OBOAcademy/obook/pull/135
  • Update which-ontology-to-use.md by @henrietteharmse in https://github.com/OBOAcademy/obook/pull/142
  • Closes #137 Update fixing-conflicts.md in https://github.com/OBOAcademy/obook/pull/139
  • #143 fix link to getting-started by @chrisroederucdenver in https://github.com/OBOAcademy/obook/pull/144
  • added common errors in actions by @shawntanzk in https://github.com/OBOAcademy/obook/pull/146
  • Create github-intro.md in https://github.com/OBOAcademy/obook/pull/148
  • Create sparql-reference.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/147
  • Working on tutorial for building ontology from scratch by @matentzn in https://github.com/OBOAcademy/obook/pull/141
  • added link to recording of the last lesson by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/150
  • Added logical axiomatization of classes & use of reasoning by @shawntanzk in https://github.com/OBOAcademy/obook/pull/136
  • Howto update ODK by @matentzn in https://github.com/OBOAcademy/obook/pull/161
  • Create new grouping in nav bar: Lessons Under Development by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/164
  • add recording to monarch tutorials by @sagehrke in https://github.com/OBOAcademy/obook/pull/166
  • Adding tutorial link for May 17, 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/170
  • Add recording from May 17, 2022 Tutorial by @sagehrke in https://github.com/OBOAcademy/obook/pull/172
  • create annotation-properties by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/173
  • Reformat, rename, reorganise Introduction to annotation properties by @matentzn in https://github.com/OBOAcademy/obook/pull/174
  • Add recording from May 31, 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/175
  • Fix typo in shell command by @katiermullen in https://github.com/OBOAcademy/obook/pull/179
  • Update Protégé configuration for new metadata properties. by @gouttegd in https://github.com/OBOAcademy/obook/pull/178
  • updated the VBO section by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/151
  • adding update import docs by @shawntanzk in https://github.com/OBOAcademy/obook/pull/182
  • Add recording from June 14, 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/186
  • Minor grammatical updates by @joeflack4 in https://github.com/OBOAcademy/obook/pull/190
  • add an overview to this how to guide by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/192
  • Very basic CLI tutorial by @matentzn in https://github.com/OBOAcademy/obook/pull/193
  • Cli tutorial by @matentzn in https://github.com/OBOAcademy/obook/pull/194
  • Intro cli 1 curl update by @ubyndr in https://github.com/OBOAcademy/obook/pull/195
  • Add recording from June 28, 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/196
  • revisions to term request guide by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/198
  • Small detail in https://oboacademy.github.io/obook/howto/installing-elk-in-protege/ by @manulera in https://github.com/OBOAcademy/obook/pull/205
  • How to be a "team open science" player by @matentzn in https://github.com/OBOAcademy/obook/pull/204
  • Update dosdp-overview.md by @dosumis in https://github.com/OBOAcademy/obook/pull/209
  • Create icbo2022.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/208
  • Create pull-requests.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/202
  • Add recording from July 12th, 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/211
  • replace link to video with video on YouTube by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/214
  • replace link to fix conflict video with link to YouTube video by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/215
  • replace link to video by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/216
  • remove iframe video because it is not working by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/217
  • replace video link by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/218
  • update video link by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/219
  • embed video by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/221
  • Create new page set-up-protege.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/222
  • add protege instructions to nav bar by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/223
  • fix typo by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/224
  • Install Protege OBO plugin section by @manulera in https://github.com/OBOAcademy/obook/pull/225
  • Create how to guide on how to create screenshots (partial and full) and paste them into an issue by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/227
  • Fixing formatting. See #233 by @cmungall in https://github.com/OBOAcademy/obook/pull/234
  • add protege-faq.md by @manulera in https://github.com/OBOAcademy/obook/pull/229
  • Update intro-to-ontologies.md by @dosumis in https://github.com/OBOAcademy/obook/pull/169
  • Fixing list formatting in multiple docs, #233 by @cmungall in https://github.com/OBOAcademy/obook/pull/236
  • Update merge and obsolete docs by @shawntanzk in https://github.com/OBOAcademy/obook/pull/145
  • WIP: Minor edits and formatting fixes by @cmungall in https://github.com/OBOAcademy/obook/pull/235
  • fix broken URL in Lessons learned from troubleshooting ROBOT by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/240
  • fix dead link by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/241
  • update obsoletion documentation by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/239
  • update image of obsoleted term example by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/242
  • fix formatting by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/245
  • fix formatting by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/246
  • add instructions to set up docker/use owltools by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/243
  • add link to merge doc by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/244
  • remove redundant text about fixing memory settings by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/248
  • add instructions on how to increase memory on PC by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/251
  • add text on how to be an open science ontologist by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/230
  • add upcoming courses by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/250
  • add link to How to be an open science ontologist by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/254
  • change seeAlso to term tracker item by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/257
  • close #237 and fix broken links by @manulera in https://github.com/OBOAcademy/obook/pull/255
  • Instructions to run the site locally added to readme.md by @manulera in https://github.com/OBOAcademy/obook/pull/253
  • extra notes for consider field in obsoletion by @manulera in https://github.com/OBOAcademy/obook/pull/261
  • Create ontology-overview.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/262
  • Added prerequisite by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/263
  • prettify files by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/267
  • Create prettify.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/268
  • Add Pull Request Part 2 Video Recording by @sagehrke in https://github.com/OBOAcademy/obook/pull/269
  • add specific examples to How to be an open science ontologist by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/270
  • Update icbo2022.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/271
  • Use canonical form for true in yaml by @cmungall in https://github.com/OBOAcademy/obook/pull/258
  • Open science edits by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/273
  • Update icbo2022.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/274
  • Add recording How to be an open science ontologist by @sagehrke in https://github.com/OBOAcademy/obook/pull/275
  • Mac heap memory size instructions update by @turbomam in https://github.com/OBOAcademy/obook/pull/276
  • when to changes to Protege config files take effect? by @turbomam in https://github.com/OBOAcademy/obook/pull/277
  • Update odk.md by @shawntanzk in https://github.com/OBOAcademy/obook/pull/278
  • create outreach materials by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/280
  • Add a sparql example by @shawntanzk in https://github.com/OBOAcademy/obook/pull/282
  • add another sparql example by @shawntanzk in https://github.com/OBOAcademy/obook/pull/285
  • Add MAxO recording from Oct 18, 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/286
  • Update Schedule: Move Contributing to Ontologies Part 1 by @sagehrke in https://github.com/OBOAcademy/obook/pull/287
  • Update Taxon restriction documents by @shawntanzk in https://github.com/OBOAcademy/obook/pull/283
  • Updating OBO Academy schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/290
  • Glossary of terms by @shawntanzk in https://github.com/OBOAcademy/obook/pull/259
  • create doc for our hackthon on 11/29 by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/291
  • Add Contributing to OBO Ontologies Recordings. by @sagehrke in https://github.com/OBOAcademy/obook/pull/294
  • embed video of contributing to ontologies by Sabrina by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/296
  • Create embed-video.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/297
  • fix link by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/298
  • Update embed-video.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/299
  • Update hackathon.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/300
  • Fixed typos in the disease-phenotype tutorial by @LCCarmody in https://github.com/OBOAcademy/obook/pull/309
  • Update: Developing an OBO Ontology lesson by @sagehrke in https://github.com/OBOAcademy/obook/pull/312
  • Created documentation on how to revert a commit using GitHub Desktop by @ar-ibrahim in https://github.com/OBOAcademy/obook/pull/314
  • fix broken links by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/310
  • fix broken links by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/305
  • Update ontology-design.md by @laurenechan in https://github.com/OBOAcademy/obook/pull/319
  • Review Ontology Pipelines with ROBOT lesson by @anitacaron in https://github.com/OBOAcademy/obook/pull/316
  • correct protege spelling by @yaseminbridges in https://github.com/OBOAcademy/obook/pull/317
  • Change my affiliation on frontpage by @matentzn in https://github.com/OBOAcademy/obook/pull/302
  • Update ontology-term-use.md by @laurenechan in https://github.com/OBOAcademy/obook/pull/308
  • updated a broken link by @sabrinatoro in https://github.com/OBOAcademy/obook/pull/311
  • Update mkdocs.yml by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/318
  • Add 404 page and fix some broken links by @caufieldjh in https://github.com/OBOAcademy/obook/pull/306
  • Updating Schedule for December 2022 by @sagehrke in https://github.com/OBOAcademy/obook/pull/323
  • Update instructions for configuring Protege memory in MS Windows by @turbomam in https://github.com/OBOAcademy/obook/pull/320
  • Ontology mappings tutorials by @matentzn in https://github.com/OBOAcademy/obook/pull/66
  • Create getting-hands-on.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/321
  • updates to getting hands on... by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/330
  • create exercise by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/331
  • add hyperlink by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/332
  • Taxon constraints update by @balhoff in https://github.com/OBOAcademy/obook/pull/329
  • fixes mermaid graphs are not rendering #333 by @souzadevinicius in https://github.com/OBOAcademy/obook/pull/334
  • Add a tutorial on how to use the tools from the ODK. by @gouttegd in https://github.com/OBOAcademy/obook/pull/336
  • Add Guide to Taxon Restrictions link to schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/348
  • Use 4 spaces for sub-lists by @balhoff in https://github.com/OBOAcademy/obook/pull/347
  • Update schedule and add recording by @sagehrke in https://github.com/OBOAcademy/obook/pull/350
  • Add a subsection on how to setup Docker in Lubuntu VM by @StroemPhi in https://github.com/OBOAcademy/obook/pull/351
  • update affiliation by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/352
  • Update set-up-protege.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/353
  • Edit button gone in OBOOK? by @souzadevinicius in https://github.com/OBOAcademy/obook/pull/356
  • Tutorial - How to add custom quality checks with ODK by @anitacaron in https://github.com/OBOAcademy/obook/pull/335
  • Update link to slides in ontology-summit-2023.md by @StroemPhi in https://github.com/OBOAcademy/obook/pull/358
  • improve readability and fix typos by @slobentanzer in https://github.com/OBOAcademy/obook/pull/359
  • try to fix rendering of indentation using 4 spaces by @slobentanzer in https://github.com/OBOAcademy/obook/pull/360
  • Update Custom OBO Dashboard creation workflow by @anitacaron in https://github.com/OBOAcademy/obook/pull/361
  • Update change-files-pull-request.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/362
  • Add new document on how to install Protege by @rays22 in https://github.com/OBOAcademy/obook/pull/364
  • Update editor information by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/366
  • Fix some typos and formatting (take 2) by @clnsmth in https://github.com/OBOAcademy/obook/pull/369
  • Monarch-kg neo4j basics tutorial by @kevinschaper in https://github.com/OBOAcademy/obook/pull/357
  • add section on How to interpret an 'and' or an 'or' by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/367
  • Update links to tutorials by @sagehrke in https://github.com/OBOAcademy/obook/pull/371
  • Embed Taxon Constraint video by @sagehrke in https://github.com/OBOAcademy/obook/pull/372
  • Embed Neo4J OBO Academy Video by @sagehrke in https://github.com/OBOAcademy/obook/pull/373
  • Embed video in Semantic Entity Matching Tutorial by @sagehrke in https://github.com/OBOAcademy/obook/pull/374
  • Embed How to be an open science ontologist video by @sagehrke in https://github.com/OBOAcademy/obook/pull/375
  • Embed Intro to CL Part 2 video by @sagehrke in https://github.com/OBOAcademy/obook/pull/378
  • Embed CL Part 1 Youtube video by @sagehrke in https://github.com/OBOAcademy/obook/pull/377
  • Update merge-terms.md by @dosumis in https://github.com/OBOAcademy/obook/pull/379
  • Update set-up-protege.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/381
  • Update schedule with OAK tutorial by @sagehrke in https://github.com/OBOAcademy/obook/pull/383
  • Update set-up-protege.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/385
  • Add Description Logic video link to explanation by @anitacaron in https://github.com/OBOAcademy/obook/pull/388
  • Add OAK tutorial YouTube video by @sagehrke in https://github.com/OBOAcademy/obook/pull/389
  • Add How-to add an ORCIDIO module by @matentzn in https://github.com/OBOAcademy/obook/pull/390
  • Add YouTube video of Wikidata session by @sagehrke in https://github.com/OBOAcademy/obook/pull/393
  • Create wikidata.md by @andrawaag in https://github.com/OBOAcademy/obook/pull/394
  • Embed Pull Request tutorial videos by @sagehrke in https://github.com/OBOAcademy/obook/pull/376
  • Update set-up-protege.md by @dosumis in https://github.com/OBOAcademy/obook/pull/392
  • Exomiser tutorial by @iQuxLE in https://github.com/OBOAcademy/obook/pull/396
  • Add Exomiser tutorial by @yaseminbridges in https://github.com/OBOAcademy/obook/pull/397
  • Updating Exomiser Tutorial by @yaseminbridges in https://github.com/OBOAcademy/obook/pull/399
  • Update add-new-slim.md in https://github.com/OBOAcademy/obook/pull/398
  • Add link to the Protégé 5.6 tutorial slides. by @gouttegd in https://github.com/OBOAcademy/obook/pull/404
  • fixes Edit button gone in OBOOK? #349 by @souzadevinicius in https://github.com/OBOAcademy/obook/pull/407
  • Add Exomiser and Protege Youtube video links by @sagehrke in https://github.com/OBOAcademy/obook/pull/408
  • Add OBO Academy Exomiser Tutorial Recording to Exomiser OBOOK page by @sagehrke in https://github.com/OBOAcademy/obook/pull/409
  • Add correct title for May 30, 2023 tutorial by @sagehrke in https://github.com/OBOAcademy/obook/pull/410
  • Create a basic tutorial for leveraging ChatGPT for ontology curation by @matentzn in https://github.com/OBOAcademy/obook/pull/400
  • Chatgpt by @matentzn in https://github.com/OBOAcademy/obook/pull/411
  • Updated Schedule Table for 30 May 2023 Tutorial by @sagehrke in https://github.com/OBOAcademy/obook/pull/412
  • Subclass vs equivalence and existential restriction tutorials by @henrietteharmse in https://github.com/OBOAcademy/obook/pull/418
  • Update OBO Academy Schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/420
  • fixed typo, made some phrasing parallel by @nlharris in https://github.com/OBOAcademy/obook/pull/422
  • Improvements to documentation about how to review PRs by @nlharris in https://github.com/OBOAcademy/obook/pull/423
  • Create early-career-data-scientist.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/425
  • Removed tutorial listed for August 8, 2023 by @sagehrke in https://github.com/OBOAcademy/obook/pull/426
  • update docs for new Protege version by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/427
  • Update early-career-data-scientist.md by @JoyeuseMuj in https://github.com/OBOAcademy/obook/pull/428
  • create Ontology User pathway by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/429
  • add ontology user pathway by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/430
  • Fix list of topics in DO video library by @nlharris in https://github.com/OBOAcademy/obook/pull/431
  • Create review-disease-mappings.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/293
  • Update mapping predicate cheatsheet by @matentzn in https://github.com/OBOAcademy/obook/pull/433
  • Add presentation links to icbo2023.md by @matentzn in https://github.com/OBOAcademy/obook/pull/436
  • move ontology user pathway to ontology user reference by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/439
  • Add August and September OBO Academy recordings to Schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/442
  • Add CITATION.cff to OBOOK by @matentzn in https://github.com/OBOAcademy/obook/pull/441
  • First draft of units tutorial by @jamesaoverton in https://github.com/OBOAcademy/obook/pull/443
  • Update schedule for 2023/10/03 with correct link by @sagehrke in https://github.com/OBOAcademy/obook/pull/444
  • Minor updates to unit tutorial by @jamesaoverton in https://github.com/OBOAcademy/obook/pull/445
  • Linking Data fixes by @jamesaoverton in https://github.com/OBOAcademy/obook/pull/447
  • Add several Biopragmatics tutorials by @cthoyt in https://github.com/OBOAcademy/obook/pull/446
  • Add youtube recordings for Sept & Oct 2023 by @sagehrke in https://github.com/OBOAcademy/obook/pull/452
  • Try to fix formatting issue in curies.md by @lubianat in https://github.com/OBOAcademy/obook/pull/453
  • Add citation instructions to the README by @cthoyt in https://github.com/OBOAcademy/obook/pull/454
  • Correct minor typo contributing-to-obo-ontologies.md by @Silvia113-SM in https://github.com/OBOAcademy/obook/pull/455
  • Add 2023-Oct-17 OBO Academy recording by @sagehrke in https://github.com/OBOAcademy/obook/pull/456
  • Instructions for using ODK with Podman instead of Docker by @daniwelter in https://github.com/OBOAcademy/obook/pull/457
  • Update github-create-pull-request.md, add general guidance on what makes a good PR by @cmungall in https://github.com/OBOAcademy/obook/pull/458
  • Update schedule to cancel Nov 28, 2023 by @sagehrke in https://github.com/OBOAcademy/obook/pull/460
  • Add 17-Nov-2023 Recording and clean up Schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/461
  • correct link to chatgpt-ontology-curation by @nlharris in https://github.com/OBOAcademy/obook/pull/463
  • add content to stub page about OntoGPT by @nlharris in https://github.com/OBOAcademy/obook/pull/464
  • fix to glommed-together lines? by @nlharris in https://github.com/OBOAcademy/obook/pull/465
  • add pointer to relevant tutorial by @nlharris in https://github.com/OBOAcademy/obook/pull/467
  • Update OBO training schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/468
  • Add 2023-Dec-12 recording to OBO Academy page by @sagehrke in https://github.com/OBOAcademy/obook/pull/469
  • Updating OBO schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/471
  • Protege link was broken by @shawntanzk in https://github.com/OBOAcademy/obook/pull/473
  • Create licensing-data-and-software.md by @kltm in https://github.com/OBOAcademy/obook/pull/475
  • Update date annotation in Custom QC tutorial by @anitacaron in https://github.com/OBOAcademy/obook/pull/476
  • Add 2024-Jan-23 OBO Academy recording by @sagehrke in https://github.com/OBOAcademy/obook/pull/474
  • Add link to Metadata in OBO presentation by @anitacaron in https://github.com/OBOAcademy/obook/pull/477
  • Create vocabularies-for-bioinformatics.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/478
  • Add draft specification for the base file approach by @matentzn in https://github.com/OBOAcademy/obook/pull/387
  • Add recording from 2024-Feb-20 by @sagehrke in https://github.com/OBOAcademy/obook/pull/482
  • Fix dead link in contributing-to-obo-ontologies by @shawntanzk in https://github.com/OBOAcademy/obook/pull/484
  • Add OBO Academy recording from 2024-March-05 by @sagehrke in https://github.com/OBOAcademy/obook/pull/485
  • Update tutorial title & presenters for April 2, 2024 by @sagehrke in https://github.com/OBOAcademy/obook/pull/487
  • Add links to slides or OBO page for OBO academy schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/490
  • Add youtube link for April 2, 2024 OBO Academy by @sagehrke in https://github.com/OBOAcademy/obook/pull/491
  • Grammar fix in docs/tutorial/sparql.md by @Daniel-Mietchen in https://github.com/OBOAcademy/obook/pull/492
  • Add Windows instruction link to setup-docker.md by @ehartley in https://github.com/OBOAcademy/obook/pull/493
  • Update Sabrina and Sarah's organization by @sagehrke in https://github.com/OBOAcademy/obook/pull/494
  • Update OBO Academy schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/497
  • Add OBO academy recording links by @sagehrke in https://github.com/OBOAcademy/obook/pull/498
  • Add Intro to Uberon youtube link by @sagehrke in https://github.com/OBOAcademy/obook/pull/499
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/502
  • Add agenda to ICBO 2024 tutorial by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/504
  • Update icbo2024.md by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/507
  • Update monarch-obo-training.md schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/509
  • Add a reference page for LLM resources to OBOOK by @matentzn in https://github.com/OBOAcademy/obook/pull/510
  • Update icbo2024.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/512
  • Update idrange.md by @balhoff in https://github.com/OBOAcademy/obook/pull/511
  • Update schedule for OBO Academy by @sagehrke in https://github.com/OBOAcademy/obook/pull/514
  • Update schedule for Oct to Dec 2024 by @sagehrke in https://github.com/OBOAcademy/obook/pull/516
  • Add material for OntoGPT workshop by @caufieldjh in https://github.com/OBOAcademy/obook/pull/519
  • Update monarch-obo-training.md schedule by @sagehrke in https://github.com/OBOAcademy/obook/pull/520
  • Add section about using WSL on windows to howto/odk-setup.md by @StroemPhi in https://github.com/OBOAcademy/obook/pull/517
  • Add how to migrate to ODK .md and link to it by @StroemPhi in https://github.com/OBOAcademy/obook/pull/521
  • Fix markdown formatting errors in odk-migrate-to-odk.md by @StroemPhi in https://github.com/OBOAcademy/obook/pull/522
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/523
  • Fix typo in owl-building-blocks.md by @balhoff in https://github.com/OBOAcademy/obook/pull/524
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/525
  • Add documentation on subset to module extraction docs by @cmungall in https://github.com/OBOAcademy/obook/pull/526
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/527
  • add video explanations for PR review by @nicolevasilevsky in https://github.com/OBOAcademy/obook/pull/528
  • Fix broken link for types of taxon restrictions by @aleixpuigb in https://github.com/OBOAcademy/obook/pull/531
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/532
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/533
  • Update monarch-obo-training.md by @cmungall in https://github.com/OBOAcademy/obook/pull/534
  • Update setting-up-project-odk.md by @timalamenciak in https://github.com/OBOAcademy/obook/pull/536
  • Document ODKGITNAME/ODKGITEMAIL. by @gouttegd in https://github.com/OBOAcademy/obook/pull/539
  • Add mailing list link to monarch-obo-training.md by @matentzn in https://github.com/OBOAcademy/obook/pull/540
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/541
  • Update monarch-obo-training.md by @sagehrke in https://github.com/OBOAcademy/obook/pull/543

New Contributors

  • @matentzn made their first contribution in https://github.com/OBOAcademy/obook/pull/1
  • @nicolevasilevsky made their first contribution in https://github.com/OBOAcademy/obook/pull/2
  • @cmungall made their first contribution in https://github.com/OBOAcademy/obook/pull/19
  • @emquardokus made their first contribution in https://github.com/OBOAcademy/obook/pull/26
  • @shawntanzk made their first contribution in https://github.com/OBOAcademy/obook/pull/30
  • @beckyjackson made their first contribution in https://github.com/OBOAcademy/obook/pull/42
  • @caufieldjh made their first contribution in https://github.com/OBOAcademy/obook/pull/46
  • @rays22 made their first contribution in https://github.com/OBOAcademy/obook/pull/54
  • @joeflack4 made their first contribution in https://github.com/OBOAcademy/obook/pull/73
  • @kimrutherford made their first contribution in https://github.com/OBOAcademy/obook/pull/74
  • @sabrinatoro made their first contribution in https://github.com/OBOAcademy/obook/pull/77
  • @balhoff made their first contribution in https://github.com/OBOAcademy/obook/pull/102
  • @dosumis made their first contribution in https://github.com/OBOAcademy/obook/pull/89
  • @Daniel-Olson made their first contribution in https://github.com/OBOAcademy/obook/pull/132
  • @henrietteharmse made their first contribution in https://github.com/OBOAcademy/obook/pull/142
  • @chrisroederucdenver made their first contribution in https://github.com/OBOAcademy/obook/pull/144
  • @sagehrke made their first contribution in https://github.com/OBOAcademy/obook/pull/166
  • @katiermullen made their first contribution in https://github.com/OBOAcademy/obook/pull/179
  • @gouttegd made their first contribution in https://github.com/OBOAcademy/obook/pull/178
  • @ubyndr made their first contribution in https://github.com/OBOAcademy/obook/pull/195
  • @manulera made their first contribution in https://github.com/OBOAcademy/obook/pull/205
  • @turbomam made their first contribution in https://github.com/OBOAcademy/obook/pull/276
  • @LCCarmody made their first contribution in https://github.com/OBOAcademy/obook/pull/309
  • @ar-ibrahim made their first contribution in https://github.com/OBOAcademy/obook/pull/314
  • @laurenechan made their first contribution in https://github.com/OBOAcademy/obook/pull/319
  • @anitacaron made their first contribution in https://github.com/OBOAcademy/obook/pull/316
  • @yaseminbridges made their first contribution in https://github.com/OBOAcademy/obook/pull/317
  • @souzadevinicius made their first contribution in https://github.com/OBOAcademy/obook/pull/334
  • @StroemPhi made their first contribution in https://github.com/OBOAcademy/obook/pull/351
  • @slobentanzer made their first contribution in https://github.com/OBOAcademy/obook/pull/359
  • @clnsmth made their first contribution in https://github.com/OBOAcademy/obook/pull/369
  • @kevinschaper made their first contribution in https://github.com/OBOAcademy/obook/pull/357
  • @andrawaag made their first contribution in https://github.com/OBOAcademy/obook/pull/394
  • @iQuxLE made their first contribution in https://github.com/OBOAcademy/obook/pull/396
  • @nlharris made their first contribution in https://github.com/OBOAcademy/obook/pull/422
  • @JoyeuseMuj made their first contribution in https://github.com/OBOAcademy/obook/pull/428
  • @jamesaoverton made their first contribution in https://github.com/OBOAcademy/obook/pull/443
  • @lubianat made their first contribution in https://github.com/OBOAcademy/obook/pull/453
  • @Silvia113-SM made their first contribution in https://github.com/OBOAcademy/obook/pull/455
  • @daniwelter made their first contribution in https://github.com/OBOAcademy/obook/pull/457
  • @kltm made their first contribution in https://github.com/OBOAcademy/obook/pull/475
  • @Daniel-Mietchen made their first contribution in https://github.com/OBOAcademy/obook/pull/492
  • @ehartley made their first contribution in https://github.com/OBOAcademy/obook/pull/493
  • @aleixpuigb made their first contribution in https://github.com/OBOAcademy/obook/pull/531
  • @timalamenciak made their first contribution in https://github.com/OBOAcademy/obook/pull/536

Full Changelog: https://github.com/OBOAcademy/obook/commits/v0.1

- Makefile
Published by matentzn 10 months ago