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evergladeswadingbird

Data from the Everglades breeding bird monitoring project

https://github.com/weecology/evergladeswadingbird

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (12.1%) to scientific vocabulary

Keywords from Contributors

ecology community-ecology small-mammal-trapping portal shiny
Last synced: 7 months ago · JSON representation

Repository

Data from the Everglades breeding bird monitoring project

Basic Info
Statistics
  • Stars: 4
  • Watchers: 4
  • Forks: 3
  • Open Issues: 19
  • Releases: 0
Created about 6 years ago · Last pushed 8 months ago
Metadata Files
Readme License Zenodo

README.md

EvergladesWadingBird Data

Build Status License DOI USACE-W912HZ-20-2-0022/3

Data from the Everglades breeding bird monitoring project

Detailed descriptions of individual data components are located in README.md files in the individual data folders. Please see the methods for details about collection and how to use the data.

Water depth is crucial to wading bird behavior. Water depth data are available from the Everglades Depth Estimation Network (EDEN), via their EDEN THREDDS server or the Explore and View EDEN (EVE) web application. We also have created the edenR package to streamline downloads, data processing, and statistics for forecasting.

Additional data to complement the wading bird data can be found at South Florida Water Management District and Florida Coastal Everglades LTER.

Data Organization

|-- Counts              <- Time series of count data from aerial and UAV images, and ground transects
|-- DataCleaningScripts <- Scripts used to add new data
|-- Hg                  <- Time series of feather mercury content
|-- Historic            <- Pre-1986 data, or outside data sources
|-- Indicators          <- Time series of indicators used in restoration assessment
|-- Methods             <- Data paper wiki outlining detailed methods
|-- Nesting             <- Time series of nest checks and nest success
|-- SiteandMethods      <- Site details, site-level data tables
|-- Weather             <- Weather station data (from NOAA)

Developer Setup

Prerequisites: Quarto, Git, R (4.0+) and/or RStudio

  1. Clone and install dependencies: bash git clone https://github.com/weecology/EvergladesWadingBird.git cd EvergladesWadingBird R -e "source('install-packages.R')"

  2. Run the methods website locally: bash cd Methods quarto preview

Owner

  • Name: Weecology
  • Login: weecology
  • Kind: organization

GitHub Events

Total
  • Create event: 72
  • Commit comment event: 1
  • Issues event: 33
  • Release event: 42
  • Watch event: 1
  • Delete event: 29
  • Issue comment event: 27
  • Push event: 125
  • Pull request review event: 2
  • Pull request review comment event: 1
  • Pull request event: 54
Last Year
  • Create event: 72
  • Commit comment event: 1
  • Issues event: 33
  • Release event: 42
  • Watch event: 1
  • Delete event: 29
  • Issue comment event: 27
  • Push event: 125
  • Pull request review event: 2
  • Pull request review comment event: 1
  • Pull request event: 54

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 693
  • Total Committers: 7
  • Avg Commits per committer: 99.0
  • Development Distribution Score (DDS): 0.609
Past Year
  • Commits: 72
  • Committers: 4
  • Avg Commits per committer: 18.0
  • Development Distribution Score (DDS): 0.361
Top Committers
Name Email Commits
Ben Weinstein b****n@B****l 271
Weecology Deploy Bot w****y@w****g 199
bw4sz b****0@g****m 109
Glenda Yenni g****a@w****g 54
Glenda g****i 47
Ethan White e****n@w****g 12
Morgan Ernest m****n@w****g 1
Committer Domains (Top 20 + Academic)
weecology.org: 4

Issues and Pull Requests

Last synced: 7 months ago

All Time
  • Total issues: 65
  • Total pull requests: 81
  • Average time to close issues: 7 months
  • Average time to close pull requests: 12 days
  • Total issue authors: 4
  • Total pull request authors: 4
  • Average comments per issue: 0.77
  • Average comments per pull request: 0.3
  • Merged pull requests: 67
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 23
  • Pull requests: 27
  • Average time to close issues: 10 days
  • Average time to close pull requests: 8 days
  • Issue authors: 3
  • Pull request authors: 3
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.37
  • Merged pull requests: 17
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • gmyenni (32)
  • ethanwhite (18)
  • bw4sz (16)
  • skmorgane (1)
Pull Request Authors
  • gmyenni (79)
  • ethanwhite (16)
  • henrykironde (3)
  • skmorgane (1)
Top Labels
Issue Labels
Zooniverse (4)
Pull Request Labels

Dependencies

.github/workflows/main.yml actions
  • EndBug/add-and-commit v9 composite
  • actions/cache v3 composite
  • actions/checkout v3 composite
  • r-lib/actions/setup-r v2 composite
  • zendesk/action-create-release v1 composite