jwst - JWST 1.19.1 (DMS B12.0.1)

What's Changed

• Backport PR #9667 on branch release/1.19.x (Test update following WFSS FITS unit change) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9673
• Backport PR #9659 on branch release/1.19.x (JP-4060: Catch NRS imaging edge case) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9674
• "Backport PR #9672 on branch release/1.19.x (JP-4067: Fix white_light crash on repeated time stamps)" by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9675

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.19.0...1.19.1

- Python
Published by zacharyburnett 7 months ago

jwst - JWST 1.19.0 (B12.0)

What's Changed

• include residual fringe test files in package data by @braingram in https://github.com/spacetelescope/jwst/pull/9316
• Update suggested milestone in PR template by @pllim in https://github.com/spacetelescope/jwst/pull/9318
• JP-3858-tso_photometry by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9294
• JP-3946: Exorcise DeprecationWarning in test suite by @pllim in https://github.com/spacetelescope/jwst/pull/9317
• Move change log instructions to readme by @pllim in https://github.com/spacetelescope/jwst/pull/9321
• JP-3861: Code style changes for extract_2d step by @stscirij in https://github.com/spacetelescope/jwst/pull/9305
• JP-3686: Test using source catalog output as tweakreg abs_refcat by @emolter in https://github.com/spacetelescope/jwst/pull/9301
• JP-3858-wfs_combine by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9307
• JP-3909: Apply fringe flat and MRS IFU time-dependent correction to VAR arrays by @pllim in https://github.com/spacetelescope/jwst/pull/9320
• JP-3872: Remove deprecated resample utilities by @emolter in https://github.com/spacetelescope/jwst/pull/9322
• JP-3937: Use isinstance instead of model_type for type checking datamodels by @emolter in https://github.com/spacetelescope/jwst/pull/9327
• JP-3903: Updating Jump Step Documentation to Include Keyword Information by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9293
• update verify_install to not use pytest by @braingram in https://github.com/spacetelescope/jwst/pull/9297
• JP-3953: Extrapolate barshadow correction to cover wavelength gaps by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9326
• Revise phrasing for specific reviews in PR task list by @pllim in https://github.com/spacetelescope/jwst/pull/9328
• Fix inadvertent removal of all by @stscirij in https://github.com/spacetelescope/jwst/pull/9338
• Remove reference to ERR in ramp docs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9343
• JP-3947 Fix MIRI LRS Flux error by @jemorrison in https://github.com/spacetelescope/jwst/pull/9337
• Clarify when to use closes in PR template by @pllim in https://github.com/spacetelescope/jwst/pull/9345
• Bump actions/setup-python from 5.4.0 to 5.5.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9351
• JP-3795: Target group association fixes by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8943
• JP-3630: Add slit-specific processing metadata by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9254
• JP-3857 rscd code style updates by @jemorrison in https://github.com/spacetelescope/jwst/pull/9275
• Small update to outlier_detection docs by @ianyuwong in https://github.com/spacetelescope/jwst/pull/9355
• JP-3871 and JP-3676: Removes "OLS" and "GLS" Code from Ramp Fitting by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9332
• JP-3978: Allow unequal number of target and psf exposures in calwebb_ami3 by @tapastro in https://github.com/spacetelescope/jwst/pull/9361
• TST: Delete unused jwst/lib/tests/stp_v1.py by @pllim in https://github.com/spacetelescope/jwst/pull/9366
• JP-3958: Provide subarray to WFSS spec2 association for image member name generation by @tapastro in https://github.com/spacetelescope/jwst/pull/9334
• Revert addition of G004 from PR 9276 by @pllim in https://github.com/spacetelescope/jwst/pull/9367
• JP-3912: Modify some tests for steps that are skipped by default by @stscirij in https://github.com/spacetelescope/jwst/pull/9364
• update readme for new regtests by @braingram in https://github.com/spacetelescope/jwst/pull/9370
• JP-3912: Fix imatch test by @stscirij in https://github.com/spacetelescope/jwst/pull/9373
• JP-3775: Test ciwatson resourcetracker implementation by @tapastro in https://github.com/spacetelescope/jwst/pull/9357
• JP-3982: numpy 2.3.0 accommodation by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9376
• JP-3917: Apply code style rules to lib by @pllim in https://github.com/spacetelescope/jwst/pull/9283
• MNT: Forward-port of PR 9374 and PR 9379 (Metadata release 1.18.0) by @pllim in https://github.com/spacetelescope/jwst/pull/9382
• remove requirements-sdp.txt by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9386
• BUG: Fix isnrsmsaspecflatlamp and remove redundant if-else in gsposition_acq by @pllim in https://github.com/spacetelescope/jwst/pull/9389
• JP-3982: Ignore fitsdiffs for atoca spectra by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9388
• JP-3923: Localize test warnings (try 2), fix test data packaging, misc test clean-ups by @pllim in https://github.com/spacetelescope/jwst/pull/9381
• TST: Enable CI for backport PR by @pllim in https://github.com/spacetelescope/jwst/pull/9392
• JP-3857 Code Style changes for linearity step by @jemorrison in https://github.com/spacetelescope/jwst/pull/9368
• JP-3956: Fix error propagation for inverse steps (photom, flatfield) by @pllim in https://github.com/spacetelescope/jwst/pull/9356
• JP-3858 background by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9359
• JP-3905 add option to save shower model in straylight step for MIRI MRS data by @jemorrison in https://github.com/spacetelescope/jwst/pull/9378
• JP-3855 Update code style for spectral_leak step by @jemorrison in https://github.com/spacetelescope/jwst/pull/9395
• JP-3916: Accounting for bias in group 2 saturation flagging by @hayescr in https://github.com/spacetelescope/jwst/pull/9302
• Update docs to reflect correct definition for pixel scale ratio by @mcara in https://github.com/spacetelescope/jwst/pull/9403
• JP-3952: Fix log message for assignwcs getopen_slits by @emolter in https://github.com/spacetelescope/jwst/pull/9410
• Setting wavelength extension for LRS slit in assign_wcs by @taylorbell57 in https://github.com/spacetelescope/jwst/pull/9372
• JP-3857 cube build code style changes by @jemorrison in https://github.com/spacetelescope/jwst/pull/9347
• JP-3857 Saturation code style changes by @jemorrison in https://github.com/spacetelescope/jwst/pull/9405
• JP-3857straylightcode_style by @jemorrison in https://github.com/spacetelescope/jwst/pull/9407
• JP-3989 cube build bug by @jemorrison in https://github.com/spacetelescope/jwst/pull/9416
• Bump actions/setup-python from 5.5.0 to 5.6.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9420
• [SCSB-205] project.license.file -> project.license-files by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9422
• Set stpipe dependence to github main by @stscirij in https://github.com/spacetelescope/jwst/pull/9421
• Fix logging message in NIRSpec assign_wcs and turn all invalid interval warning into error by @pllim in https://github.com/spacetelescope/jwst/pull/9412
• JP-3858-scripts by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9290
• JP-3862: Associations code style by @tapastro in https://github.com/spacetelescope/jwst/pull/9393
• Shared utilities for saving multiple spectra in a flat format by @emolter in https://github.com/spacetelescope/jwst/pull/9418
• JP-3862: Fix Path methods issue found by sonarscan by @tapastro in https://github.com/spacetelescope/jwst/pull/9427
• JP-3899: Remove cube_skymatch by @emolter in https://github.com/spacetelescope/jwst/pull/9426
• MNT: Delete test notebooks by @pllim in https://github.com/spacetelescope/jwst/pull/9428
• Follow up of JP-3917: Apply code style rules to lib by @pllim in https://github.com/spacetelescope/jwst/pull/9423
• DOC: Fix association doc references, general doc updates by @pllim in https://github.com/spacetelescope/jwst/pull/9408
• JP-3810: Add tests, fix bugs, remove unused code for AMI module by @emolter in https://github.com/spacetelescope/jwst/pull/9263
• JP-3988: Enhance the table reports for STFITSDiff by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9413
• JP-3986 - Add tests for persistence step by @stscirij in https://github.com/spacetelescope/jwst/pull/9419
• JP-3810: Patch AMI bugs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9434
• JP-3861: Persistence style updates by @stscirij in https://github.com/spacetelescope/jwst/pull/9390
• JP-3941: Refactor white_light to get correct time stamps and spectral orders for NIRISS by @emolter in https://github.com/spacetelescope/jwst/pull/9431
• JP-3775: Expand usage of resource_tracker for benchmarking by @tapastro in https://github.com/spacetelescope/jwst/pull/9433
• JP-3908: Incorporate stfitsdiff into regression tests by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9414
• Minor clean up by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9444
• JP-3776: Improve AmiAnalyze memory usage by @emolter in https://github.com/spacetelescope/jwst/pull/9442
• JP-3949: Subclass CRDS to take advantage of lazy-loading of metadata by @emolter in https://github.com/spacetelescope/jwst/pull/9429
• JP-3861: Style formats for the coron package by @stscirij in https://github.com/spacetelescope/jwst/pull/9432
• JP-3939: Add BJD_TDB to white light output table by @emolter in https://github.com/spacetelescope/jwst/pull/9445
• TST: xpass is now a failure by @pllim in https://github.com/spacetelescope/jwst/pull/9458
• Separate nsclean tests from standard runs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9453
• Fix style in dark_current by @nden in https://github.com/spacetelescope/jwst/pull/9457
• JP-3810 followup: small clean-up tasks in AMI module by @emolter in https://github.com/spacetelescope/jwst/pull/9441
• JP-3859: Style updates for flat_field by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9464
• Fix refpix log messages by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9478
• JP-3917: Style fix for mrs_imatch by @pllim in https://github.com/spacetelescope/jwst/pull/9474
• Photom style by @stscirij in https://github.com/spacetelescope/jwst/pull/9466
• adding missing argument irs2meansubtraction to refpix documentation by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9477
• adding max and min values for files a and b in table comparison by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9473
• JP-3857 Fringe Step code style changes by @jemorrison in https://github.com/spacetelescope/jwst/pull/9476
• JP-3906: Support extrapolation of dark files to match arbitrary science input size by @tapastro in https://github.com/spacetelescope/jwst/pull/9468
• Added ATOCA description to extract1d RtD page by @hover2pi in https://github.com/spacetelescope/jwst/pull/9484
• JP-3895: Adding support for BUNIT!=MJy/sr to tso_photometry by @taylorbell57 in https://github.com/spacetelescope/jwst/pull/9299
• Atoca utils test should use numpy isclose by @emolter in https://github.com/spacetelescope/jwst/pull/9492
• JP-1028: Propagate slit name through NIRSpec WCS by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9404
• Replace mentions of WebbPSF with STPSF by @emolter in https://github.com/spacetelescope/jwst/pull/9497
• TST: Refactor testassociationssdp_pools by @pllim in https://github.com/spacetelescope/jwst/pull/9470
• JP-4016: Fix crashes when max grid size is reached by ATOCA by @emolter in https://github.com/spacetelescope/jwst/pull/9491
• Remove handling for deprecation warnings by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9498
• JP-3841: Flat spectral table for TSO by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9430
• JP-3837: Allow NIRCam image to match subarray in photom table by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9485
• Test msaflagopen with custom assign_wcs ref file by @nden in https://github.com/spacetelescope/jwst/pull/9495
• coverage: omit config[-3].py files by @jhunkeler in https://github.com/spacetelescope/jwst/pull/9512
• stfitsdiff bug in comparison of header keywords and comments by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9500
• JP-3940: Change EMIcorr default algorithm by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9510
• Ignore custom ref files in fitsdiff by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9513
• JP-3923: Hide benign runtime warnings by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9490
• JP-4021: Fix a bug where insufficient valid background pixels case was not caught for WFSS background step by @emolter in https://github.com/spacetelescope/jwst/pull/9507
• JP-3765: Add regression tests for likelihood algorithm by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9509
• JP-3873: Expand hard-coded NIRSpec wavelength range by @hayescr in https://github.com/spacetelescope/jwst/pull/9314
• JP-3116: Use duplication checking to prevent undesirable associations in DMS operations by @tapastro in https://github.com/spacetelescope/jwst/pull/9501
• Ignore WCS computation warning in regtest by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9518
• TST: Move association pool regtest truth to somewhere more intuitive (for real) by @pllim in https://github.com/spacetelescope/jwst/pull/9521
• TST: New sdppoolcopy okify_op just for SDP pools regtests by @pllim in https://github.com/spacetelescope/jwst/pull/9524
• Catch divide by zero warning by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9525
• JP-3795: Use dash instead of underscore to include NRS FS target ID by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9511
• JP-3995: Make background step able to run with asn files as well by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9451
• Bump OpenAstronomy/github-actions-workflows from 1.16.0 to 1.17.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9530
• JP-3922: Add a slice map to NRS IFU model and WCS by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9452
• JP-3707: Expose options to disable var and context computation in resample by @emolter in https://github.com/spacetelescope/jwst/pull/9517
• JP-3825: Implement background subtraction from reference file for NIS_SOSS by @tapastro in https://github.com/spacetelescope/jwst/pull/9523
• JP-3931: Save x1d, c1d in single-file flat format for wfss modes by @emolter in https://github.com/spacetelescope/jwst/pull/9402
• TST: Exorcise t_path and TemporaryDirectory from test suite by @pllim in https://github.com/spacetelescope/jwst/pull/9538
• JP-4024: Set negative NIRSpec flat fields to NaN and DNU by @hayescr in https://github.com/spacetelescope/jwst/pull/9522
• Give pixfrac and kernel parameters limits for outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/9534
• JP-4004: Convolve data with Gaussian for tweakreg segmentation starfinder by @emolter in https://github.com/spacetelescope/jwst/pull/9463
• JP-4029: fix conflicting aliases for the background step by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9533
• Fix importing fixtures across subfolders by @emolter in https://github.com/spacetelescope/jwst/pull/9545
• resolve bug in build.yml, and bump OpenAstronomy/github-actions-workflows to 2.0.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9549
• Follow up on using custom reference files by @nden in https://github.com/spacetelescope/jwst/pull/9551
• Bump OpenAstronomy/github-actions-workflows from 1.17.0 to 2.0.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9556
• MNT: Update CODEOWNERS for Dependabot by @pllim in https://github.com/spacetelescope/jwst/pull/9557
• JP-3490: Remove deprecated call method by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9548
• JP-3929 Use Absolute imports by @jemorrison in https://github.com/spacetelescope/jwst/pull/9540
• Add unit tests for the ipc package by @stscirij in https://github.com/spacetelescope/jwst/pull/9531
• Update README to reflect 1.18.1 patch release by @tapastro in https://github.com/spacetelescope/jwst/pull/9536
• remove description of non-working logging configuration by @braingram in https://github.com/spacetelescope/jwst/pull/9565
• Move AMI pointing info out of .ami and into .guidestar by @emolter in https://github.com/spacetelescope/jwst/pull/9560
• Prevent prints in tests by @emolter in https://github.com/spacetelescope/jwst/pull/9564
• JP-3904 Using new nirspec dark model by @jemorrison in https://github.com/spacetelescope/jwst/pull/9493
• JP-3898: Move pub server deprecation to historical footnote by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9563
• JP-4003: Fix crash in assignmovingtarget_wcs (try 2) by @pllim in https://github.com/spacetelescope/jwst/pull/9552
• Revert to FITSDiff for regtest comparisons by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9573
• JP-3861: IPC style updates by @stscirij in https://github.com/spacetelescope/jwst/pull/9569
• Consolidate groupid creation and use readmetadata to make group_id in ModelLibrary by @emolter in https://github.com/spacetelescope/jwst/pull/9567
• Update resample unit tests by @mcara in https://github.com/spacetelescope/jwst/pull/9278
• Update minimum supported version of asdf-astropy by @tapastro in https://github.com/spacetelescope/jwst/pull/9583
• Temporary python upper pin to avoid logging failures by @tapastro in https://github.com/spacetelescope/jwst/pull/9582
• add upper pin to drizzle by @braingram in https://github.com/spacetelescope/jwst/pull/9595
• a few more CI fixes for 3.13 pin by @braingram in https://github.com/spacetelescope/jwst/pull/9592
• release metadata for 1.19.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9604
• Backport PR #9550 on branch release/1.19.x (TST: Remove pyargs from toxenv) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9628
• Backport PR #9606 on branch release/1.19.x (Fix for slice width calculation) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9629
• Backport PR #9609 on branch release/1.19.x (CRDS 12.0 Build: Check shape of wavelengthrange entry for indexing; update SOSS RT for bkg use) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9630
• Backport PR #9616 on branch release/1.19.x (Update logging unit test) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9631
• Backport PR #9614 on branch release/1.19.x (Use actual target id instead of placeholder for WFSS level 3 associations) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9632
• Backport PR #9593 on branch release/1.19.x (Remove attempted handling of memmap in container) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9633
• Backport PR #9602 on branch release/1.19.x (JP-4047: Update regtests for niriss and nircam wfss) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9634
• Backport PR #9568 on branch release/1.19.x (JP-3919: Background step documentation needs updates) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9635
• Backport PR #9603 on branch release/1.19.x (JP-4043: Handle subarray data in background step for wfss data) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9636
• Backport PR #9626 on branch release/1.19.x (Remove python upper pin) by @tapastro in https://github.com/spacetelescope/jwst/pull/9637
• Backport PR #9584 on branch release/1.19.x (JP-3864: Move to unified bkg reftype for wfss) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9638
• Backport PR #9625 on branch release/1.19.x (JP-4052: Fix extract1d and combine1d failures from all-NaN slit) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9639
• Backport PR #9621 on branch release/1.19.x (JP-3992: Generate convex hull S_REGION for Level 3 WFSS spectral products) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9640
• Backport PR #9615 on branch release/1.19.x (Readme updates for B12.0 CRDS merge and DMS installation clarity) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9641

New Contributors

• @taylorbell57 made their first contribution in https://github.com/spacetelescope/jwst/pull/9372

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.18.1...1.19.0

- Python
Published by zacharyburnett 7 months ago

jwst - 1.19.0

What's Changed

• include residual fringe test files in package data by @braingram in https://github.com/spacetelescope/jwst/pull/9316
• Update suggested milestone in PR template by @pllim in https://github.com/spacetelescope/jwst/pull/9318
• JP-3858-tso_photometry by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9294
• JP-3946: Exorcise DeprecationWarning in test suite by @pllim in https://github.com/spacetelescope/jwst/pull/9317
• Move change log instructions to readme by @pllim in https://github.com/spacetelescope/jwst/pull/9321
• JP-3861: Code style changes for extract_2d step by @stscirij in https://github.com/spacetelescope/jwst/pull/9305
• JP-3686: Test using source catalog output as tweakreg abs_refcat by @emolter in https://github.com/spacetelescope/jwst/pull/9301
• JP-3858-wfs_combine by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9307
• JP-3909: Apply fringe flat and MRS IFU time-dependent correction to VAR arrays by @pllim in https://github.com/spacetelescope/jwst/pull/9320
• JP-3872: Remove deprecated resample utilities by @emolter in https://github.com/spacetelescope/jwst/pull/9322
• JP-3937: Use isinstance instead of model_type for type checking datamodels by @emolter in https://github.com/spacetelescope/jwst/pull/9327
• JP-3903: Updating Jump Step Documentation to Include Keyword Information by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9293
• update verify_install to not use pytest by @braingram in https://github.com/spacetelescope/jwst/pull/9297
• JP-3953: Extrapolate barshadow correction to cover wavelength gaps by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9326
• Revise phrasing for specific reviews in PR task list by @pllim in https://github.com/spacetelescope/jwst/pull/9328
• Fix inadvertent removal of all by @stscirij in https://github.com/spacetelescope/jwst/pull/9338
• Remove reference to ERR in ramp docs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9343
• JP-3947 Fix MIRI LRS Flux error by @jemorrison in https://github.com/spacetelescope/jwst/pull/9337
• Clarify when to use closes in PR template by @pllim in https://github.com/spacetelescope/jwst/pull/9345
• Bump actions/setup-python from 5.4.0 to 5.5.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9351
• JP-3795: Target group association fixes by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8943
• JP-3630: Add slit-specific processing metadata by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9254
• JP-3857 rscd code style updates by @jemorrison in https://github.com/spacetelescope/jwst/pull/9275
• Small update to outlier_detection docs by @ianyuwong in https://github.com/spacetelescope/jwst/pull/9355
• JP-3871 and JP-3676: Removes "OLS" and "GLS" Code from Ramp Fitting by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9332
• JP-3978: Allow unequal number of target and psf exposures in calwebb_ami3 by @tapastro in https://github.com/spacetelescope/jwst/pull/9361
• TST: Delete unused jwst/lib/tests/stp_v1.py by @pllim in https://github.com/spacetelescope/jwst/pull/9366
• JP-3958: Provide subarray to WFSS spec2 association for image member name generation by @tapastro in https://github.com/spacetelescope/jwst/pull/9334
• Revert addition of G004 from PR 9276 by @pllim in https://github.com/spacetelescope/jwst/pull/9367
• JP-3912: Modify some tests for steps that are skipped by default by @stscirij in https://github.com/spacetelescope/jwst/pull/9364
• update readme for new regtests by @braingram in https://github.com/spacetelescope/jwst/pull/9370
• JP-3912: Fix imatch test by @stscirij in https://github.com/spacetelescope/jwst/pull/9373
• JP-3775: Test ciwatson resourcetracker implementation by @tapastro in https://github.com/spacetelescope/jwst/pull/9357
• JP-3982: numpy 2.3.0 accommodation by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9376
• JP-3917: Apply code style rules to lib by @pllim in https://github.com/spacetelescope/jwst/pull/9283
• MNT: Forward-port of PR 9374 and PR 9379 (Metadata release 1.18.0) by @pllim in https://github.com/spacetelescope/jwst/pull/9382
• remove requirements-sdp.txt by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9386
• BUG: Fix isnrsmsaspecflatlamp and remove redundant if-else in gsposition_acq by @pllim in https://github.com/spacetelescope/jwst/pull/9389
• JP-3982: Ignore fitsdiffs for atoca spectra by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9388
• JP-3923: Localize test warnings (try 2), fix test data packaging, misc test clean-ups by @pllim in https://github.com/spacetelescope/jwst/pull/9381
• TST: Enable CI for backport PR by @pllim in https://github.com/spacetelescope/jwst/pull/9392
• JP-3857 Code Style changes for linearity step by @jemorrison in https://github.com/spacetelescope/jwst/pull/9368
• JP-3956: Fix error propagation for inverse steps (photom, flatfield) by @pllim in https://github.com/spacetelescope/jwst/pull/9356
• JP-3858 background by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9359
• JP-3905 add option to save shower model in straylight step for MIRI MRS data by @jemorrison in https://github.com/spacetelescope/jwst/pull/9378
• JP-3855 Update code style for spectral_leak step by @jemorrison in https://github.com/spacetelescope/jwst/pull/9395
• JP-3916: Accounting for bias in group 2 saturation flagging by @hayescr in https://github.com/spacetelescope/jwst/pull/9302
• Update docs to reflect correct definition for pixel scale ratio by @mcara in https://github.com/spacetelescope/jwst/pull/9403
• JP-3952: Fix log message for assignwcs getopen_slits by @emolter in https://github.com/spacetelescope/jwst/pull/9410
• Setting wavelength extension for LRS slit in assign_wcs by @taylorbell57 in https://github.com/spacetelescope/jwst/pull/9372
• JP-3857 cube build code style changes by @jemorrison in https://github.com/spacetelescope/jwst/pull/9347
• JP-3857 Saturation code style changes by @jemorrison in https://github.com/spacetelescope/jwst/pull/9405
• JP-3857straylightcode_style by @jemorrison in https://github.com/spacetelescope/jwst/pull/9407
• JP-3989 cube build bug by @jemorrison in https://github.com/spacetelescope/jwst/pull/9416
• Bump actions/setup-python from 5.5.0 to 5.6.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9420
• [SCSB-205] project.license.file -> project.license-files by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9422
• Set stpipe dependence to github main by @stscirij in https://github.com/spacetelescope/jwst/pull/9421
• Fix logging message in NIRSpec assign_wcs and turn all invalid interval warning into error by @pllim in https://github.com/spacetelescope/jwst/pull/9412
• JP-3858-scripts by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9290
• JP-3862: Associations code style by @tapastro in https://github.com/spacetelescope/jwst/pull/9393
• Shared utilities for saving multiple spectra in a flat format by @emolter in https://github.com/spacetelescope/jwst/pull/9418
• JP-3862: Fix Path methods issue found by sonarscan by @tapastro in https://github.com/spacetelescope/jwst/pull/9427
• JP-3899: Remove cube_skymatch by @emolter in https://github.com/spacetelescope/jwst/pull/9426
• MNT: Delete test notebooks by @pllim in https://github.com/spacetelescope/jwst/pull/9428
• Follow up of JP-3917: Apply code style rules to lib by @pllim in https://github.com/spacetelescope/jwst/pull/9423
• DOC: Fix association doc references, general doc updates by @pllim in https://github.com/spacetelescope/jwst/pull/9408
• JP-3810: Add tests, fix bugs, remove unused code for AMI module by @emolter in https://github.com/spacetelescope/jwst/pull/9263
• JP-3988: Enhance the table reports for STFITSDiff by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9413
• JP-3986 - Add tests for persistence step by @stscirij in https://github.com/spacetelescope/jwst/pull/9419
• JP-3810: Patch AMI bugs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9434
• JP-3861: Persistence style updates by @stscirij in https://github.com/spacetelescope/jwst/pull/9390
• JP-3941: Refactor white_light to get correct time stamps and spectral orders for NIRISS by @emolter in https://github.com/spacetelescope/jwst/pull/9431
• JP-3775: Expand usage of resource_tracker for benchmarking by @tapastro in https://github.com/spacetelescope/jwst/pull/9433
• JP-3908: Incorporate stfitsdiff into regression tests by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9414
• Minor clean up by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9444
• JP-3776: Improve AmiAnalyze memory usage by @emolter in https://github.com/spacetelescope/jwst/pull/9442
• JP-3949: Subclass CRDS to take advantage of lazy-loading of metadata by @emolter in https://github.com/spacetelescope/jwst/pull/9429
• JP-3861: Style formats for the coron package by @stscirij in https://github.com/spacetelescope/jwst/pull/9432
• JP-3939: Add BJD_TDB to white light output table by @emolter in https://github.com/spacetelescope/jwst/pull/9445
• TST: xpass is now a failure by @pllim in https://github.com/spacetelescope/jwst/pull/9458
• Separate nsclean tests from standard runs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9453
• Fix style in dark_current by @nden in https://github.com/spacetelescope/jwst/pull/9457
• JP-3810 followup: small clean-up tasks in AMI module by @emolter in https://github.com/spacetelescope/jwst/pull/9441
• JP-3859: Style updates for flat_field by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9464
• Fix refpix log messages by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9478
• JP-3917: Style fix for mrs_imatch by @pllim in https://github.com/spacetelescope/jwst/pull/9474
• Photom style by @stscirij in https://github.com/spacetelescope/jwst/pull/9466
• adding missing argument irs2meansubtraction to refpix documentation by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9477
• adding max and min values for files a and b in table comparison by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9473
• JP-3857 Fringe Step code style changes by @jemorrison in https://github.com/spacetelescope/jwst/pull/9476
• JP-3906: Support extrapolation of dark files to match arbitrary science input size by @tapastro in https://github.com/spacetelescope/jwst/pull/9468
• Added ATOCA description to extract1d RtD page by @hover2pi in https://github.com/spacetelescope/jwst/pull/9484
• JP-3895: Adding support for BUNIT!=MJy/sr to tso_photometry by @taylorbell57 in https://github.com/spacetelescope/jwst/pull/9299
• Atoca utils test should use numpy isclose by @emolter in https://github.com/spacetelescope/jwst/pull/9492
• JP-1028: Propagate slit name through NIRSpec WCS by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9404
• Replace mentions of WebbPSF with STPSF by @emolter in https://github.com/spacetelescope/jwst/pull/9497
• TST: Refactor testassociationssdp_pools by @pllim in https://github.com/spacetelescope/jwst/pull/9470
• JP-4016: Fix crashes when max grid size is reached by ATOCA by @emolter in https://github.com/spacetelescope/jwst/pull/9491
• Remove handling for deprecation warnings by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9498
• JP-3841: Flat spectral table for TSO by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9430
• JP-3837: Allow NIRCam image to match subarray in photom table by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9485
• Test msaflagopen with custom assign_wcs ref file by @nden in https://github.com/spacetelescope/jwst/pull/9495
• coverage: omit config[-3].py files by @jhunkeler in https://github.com/spacetelescope/jwst/pull/9512
• stfitsdiff bug in comparison of header keywords and comments by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9500
• JP-3940: Change EMIcorr default algorithm by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9510
• Ignore custom ref files in fitsdiff by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9513
• JP-3923: Hide benign runtime warnings by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9490
• JP-4021: Fix a bug where insufficient valid background pixels case was not caught for WFSS background step by @emolter in https://github.com/spacetelescope/jwst/pull/9507
• JP-3765: Add regression tests for likelihood algorithm by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9509
• JP-3873: Expand hard-coded NIRSpec wavelength range by @hayescr in https://github.com/spacetelescope/jwst/pull/9314
• JP-3116: Use duplication checking to prevent undesirable associations in DMS operations by @tapastro in https://github.com/spacetelescope/jwst/pull/9501
• Ignore WCS computation warning in regtest by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9518
• TST: Move association pool regtest truth to somewhere more intuitive (for real) by @pllim in https://github.com/spacetelescope/jwst/pull/9521
• TST: New sdppoolcopy okify_op just for SDP pools regtests by @pllim in https://github.com/spacetelescope/jwst/pull/9524
• Catch divide by zero warning by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9525
• JP-3795: Use dash instead of underscore to include NRS FS target ID by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9511
• JP-3995: Make background step able to run with asn files as well by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9451
• Bump OpenAstronomy/github-actions-workflows from 1.16.0 to 1.17.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9530
• JP-3922: Add a slice map to NRS IFU model and WCS by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9452
• JP-3707: Expose options to disable var and context computation in resample by @emolter in https://github.com/spacetelescope/jwst/pull/9517
• JP-3825: Implement background subtraction from reference file for NIS_SOSS by @tapastro in https://github.com/spacetelescope/jwst/pull/9523
• JP-3931: Save x1d, c1d in single-file flat format for wfss modes by @emolter in https://github.com/spacetelescope/jwst/pull/9402
• TST: Exorcise t_path and TemporaryDirectory from test suite by @pllim in https://github.com/spacetelescope/jwst/pull/9538
• JP-4024: Set negative NIRSpec flat fields to NaN and DNU by @hayescr in https://github.com/spacetelescope/jwst/pull/9522
• Give pixfrac and kernel parameters limits for outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/9534
• JP-4004: Convolve data with Gaussian for tweakreg segmentation starfinder by @emolter in https://github.com/spacetelescope/jwst/pull/9463
• JP-4029: fix conflicting aliases for the background step by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9533
• Fix importing fixtures across subfolders by @emolter in https://github.com/spacetelescope/jwst/pull/9545
• resolve bug in build.yml, and bump OpenAstronomy/github-actions-workflows to 2.0.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9549
• Follow up on using custom reference files by @nden in https://github.com/spacetelescope/jwst/pull/9551
• Bump OpenAstronomy/github-actions-workflows from 1.17.0 to 2.0.0 by @dependabot[bot] in https://github.com/spacetelescope/jwst/pull/9556
• MNT: Update CODEOWNERS for Dependabot by @pllim in https://github.com/spacetelescope/jwst/pull/9557
• JP-3490: Remove deprecated call method by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9548
• JP-3929 Use Absolute imports by @jemorrison in https://github.com/spacetelescope/jwst/pull/9540
• Add unit tests for the ipc package by @stscirij in https://github.com/spacetelescope/jwst/pull/9531
• Update README to reflect 1.18.1 patch release by @tapastro in https://github.com/spacetelescope/jwst/pull/9536
• remove description of non-working logging configuration by @braingram in https://github.com/spacetelescope/jwst/pull/9565
• Move AMI pointing info out of .ami and into .guidestar by @emolter in https://github.com/spacetelescope/jwst/pull/9560
• Prevent prints in tests by @emolter in https://github.com/spacetelescope/jwst/pull/9564
• JP-3904 Using new nirspec dark model by @jemorrison in https://github.com/spacetelescope/jwst/pull/9493
• JP-3898: Move pub server deprecation to historical footnote by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9563
• JP-4003: Fix crash in assignmovingtarget_wcs (try 2) by @pllim in https://github.com/spacetelescope/jwst/pull/9552
• Revert to FITSDiff for regtest comparisons by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9573
• JP-3861: IPC style updates by @stscirij in https://github.com/spacetelescope/jwst/pull/9569
• Consolidate groupid creation and use readmetadata to make group_id in ModelLibrary by @emolter in https://github.com/spacetelescope/jwst/pull/9567
• Update resample unit tests by @mcara in https://github.com/spacetelescope/jwst/pull/9278
• Update minimum supported version of asdf-astropy by @tapastro in https://github.com/spacetelescope/jwst/pull/9583
• Temporary python upper pin to avoid logging failures by @tapastro in https://github.com/spacetelescope/jwst/pull/9582
• add upper pin to drizzle by @braingram in https://github.com/spacetelescope/jwst/pull/9595
• a few more CI fixes for 3.13 pin by @braingram in https://github.com/spacetelescope/jwst/pull/9592
• release metadata for 1.19.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9604
• Backport PR #9550 on branch release/1.19.x (TST: Remove pyargs from toxenv) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9628
• Backport PR #9606 on branch release/1.19.x (Fix for slice width calculation) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9629
• Backport PR #9609 on branch release/1.19.x (CRDS 12.0 Build: Check shape of wavelengthrange entry for indexing; update SOSS RT for bkg use) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9630
• Backport PR #9616 on branch release/1.19.x (Update logging unit test) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9631
• Backport PR #9614 on branch release/1.19.x (Use actual target id instead of placeholder for WFSS level 3 associations) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9632
• Backport PR #9593 on branch release/1.19.x (Remove attempted handling of memmap in container) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9633
• Backport PR #9602 on branch release/1.19.x (JP-4047: Update regtests for niriss and nircam wfss) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9634
• Backport PR #9568 on branch release/1.19.x (JP-3919: Background step documentation needs updates) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9635
• Backport PR #9603 on branch release/1.19.x (JP-4043: Handle subarray data in background step for wfss data) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9636
• Backport PR #9626 on branch release/1.19.x (Remove python upper pin) by @tapastro in https://github.com/spacetelescope/jwst/pull/9637
• Backport PR #9584 on branch release/1.19.x (JP-3864: Move to unified bkg reftype for wfss) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9638
• Backport PR #9625 on branch release/1.19.x (JP-4052: Fix extract1d and combine1d failures from all-NaN slit) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9639
• Backport PR #9621 on branch release/1.19.x (JP-3992: Generate convex hull S_REGION for Level 3 WFSS spectral products) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9640
• Backport PR #9615 on branch release/1.19.x (Readme updates for B12.0 CRDS merge and DMS installation clarity) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9641

New Contributors

• @taylorbell57 made their first contribution in https://github.com/spacetelescope/jwst/pull/9372

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.18.1...1.19.0

- Python
Published by zacharyburnett 8 months ago

jwst - 1.18.1

What's Changed

• Backport PR #9501 on branch release/1.18.x (JP-3116: Use duplication checking to prevent undesirable associations in DMS operations) by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9529
• Backport PR #9507: JP-4021: Fix a bug where insufficient valid background pixels case was not caught for WFSS background step by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9528

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.18.0...1.18.1

- Python
Published by zacharyburnett 9 months ago

jwst - 1.18.0

What's Changed

• Prepare for post-1.17.0 development by @tapastro in https://github.com/spacetelescope/jwst/pull/9025
• JP-3784: Fix off-nominal pixelreplace and cubebuild output names by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9019
• Add suffix for SIRS refpix output so it can be okified by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9027
• Bugfix for SIRS reference pixel subtraction by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9037
• JP-3664: Fix pixel replace numpy 2.0 issues by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9004
• Update CRDS cache workflow usage to reduce random failures by @braingram in https://github.com/spacetelescope/jwst/pull/9040
• JP-3834: Update default values for the source finding in tweakreg to match the algorithm by @mcara in https://github.com/spacetelescope/jwst/pull/9036
• Metadata updates for 1.17.1 by @jhunkeler in https://github.com/spacetelescope/jwst/pull/9043
• Fix GWCS failures due to the API spring cleaning PR by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8965
• try to ignore requirements-sdp.txt for dependabot by @braingram in https://github.com/spacetelescope/jwst/pull/9051
• JP-3822: restructure outlier detection unit tests by @emolter in https://github.com/spacetelescope/jwst/pull/9052
• JP-3794: Add trace-based extraction option for NIRSpec by @hayescr in https://github.com/spacetelescope/jwst/pull/9022
• Update CODEOWNERS and remove unused files by @braingram in https://github.com/spacetelescope/jwst/pull/9055
• Update MRS photom documentation by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9065
• JP-3840: Include gwcs install warning and stasis install details by @tapastro in https://github.com/spacetelescope/jwst/pull/9066
• Fix extract_1d unit test failure under numpy 2 by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9069
• JP-1649: Add option for user-defined sky levels in skymatch by @emolter in https://github.com/spacetelescope/jwst/pull/9053
• JP-3838: Update README description of CRDS setup by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9078
• JP-3769: Add code style F, E, W rules by @emolter in https://github.com/spacetelescope/jwst/pull/9076
• JP-3755: Remove unused options and add unit tests to SOSS extraction algorithm by @emolter in https://github.com/spacetelescope/jwst/pull/9000
• remove no longer needed warning filter by @braingram in https://github.com/spacetelescope/jwst/pull/9084
• JP-3829: Add flat handling to cleanflickernoise by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9064
• Convert np.int to int for logging in numpy 2 by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9101
• JP-3664: Testing changes for numpy 2.0 compatibility by @tapastro in https://github.com/spacetelescope/jwst/pull/8718
• JP-3769: Style rules example case by @emolter in https://github.com/spacetelescope/jwst/pull/9081
• Fix msa frame transform for opaque images by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9102
• build sdist with python 3.13 (point to workflow fork) by @braingram in https://github.com/spacetelescope/jwst/pull/9106
• Move mypy type hint checking into pre-commit by @emolter in https://github.com/spacetelescope/jwst/pull/9108
• JP-3862: Apply code style to pixel_replace module by @tapastro in https://github.com/spacetelescope/jwst/pull/9107
• JP-3851: Remove fits_generator by @emolter in https://github.com/spacetelescope/jwst/pull/9111
• Remove unused .flake8 config file by @emolter in https://github.com/spacetelescope/jwst/pull/9115
• Add Codespell to pre-commit by @emolter in https://github.com/spacetelescope/jwst/pull/9097
• Fix sonar scan failures on AMI changes by @emolter in https://github.com/spacetelescope/jwst/pull/9112
• Emicorr speedup by @t-brandt in https://github.com/spacetelescope/jwst/pull/9077
• Style fixes for assign_mtwcs by @emolter in https://github.com/spacetelescope/jwst/pull/9113
• JP-251: Optimal extraction support for MIRI LRS by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8967
• JP-3859: Apply code style to cleanflickernoise and nsclean by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9114
• drop support for python 3.10 by @braingram in https://github.com/spacetelescope/jwst/pull/9116
• Fix code style in outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/9127
• JP-3777: Select first and last groups in ramp fitting by @stscirij in https://github.com/spacetelescope/jwst/pull/9095
• JP-3697: Jump Step Refactor by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9039
• Remove tomli, no longer relevant for 3.11 by @emolter in https://github.com/spacetelescope/jwst/pull/9133
• set stcal to main, allow python 3.13 by @braingram in https://github.com/spacetelescope/jwst/pull/9105
• JP-3859: Apply code style rules to msaflagopen by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9124
• Bump actions/setup-python from 5.3.0 to 5.4.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/9134
• Bump OpenAstronomy/github-actions-workflows from 1.15.0 to 1.16.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/9135
• JP-3116: Do not create observation-only Level 2 associations if part of a background candidate by @tapastro in https://github.com/spacetelescope/jwst/pull/9098
• Add line length ignores for spec strings by @emolter in https://github.com/spacetelescope/jwst/pull/9139
• Apply code style rules to source_catalog by @emolter in https://github.com/spacetelescope/jwst/pull/9138
• Fix formatting error by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9142
• replace usage of random.random() with np.random.random() by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9137
• JP-3796: Scale barshadow correction to long slits by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9085
• JP-3827: Remove unused error from ramp data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9109
• Apply code style rules to tweakreg by @emolter in https://github.com/spacetelescope/jwst/pull/9130
• Apply code style rules to badpix_selfcal by @emolter in https://github.com/spacetelescope/jwst/pull/9140
• JP-3830: MRS residual cosmic ray shower straylight correction by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9126
• Apply code style rules to datamodels submodule by @emolter in https://github.com/spacetelescope/jwst/pull/9131
• Apply code style rules to stpipe by @emolter in https://github.com/spacetelescope/jwst/pull/9150
• Correct error in MSA metadata coordinate description by @hayescr in https://github.com/spacetelescope/jwst/pull/9154
• Apply code style rules to wfss_contam by @emolter in https://github.com/spacetelescope/jwst/pull/9151
• Apply basic code style changes to lastframe step by @jemorrison in https://github.com/spacetelescope/jwst/pull/9147
• Replace hidden wcs pipeline attribute with public one by @emolter in https://github.com/spacetelescope/jwst/pull/9165
• Apply code style rules to soss_extract by @emolter in https://github.com/spacetelescope/jwst/pull/9156
• Xfail testfgsguider until CRDS files are repaired by @tapastro in https://github.com/spacetelescope/jwst/pull/9169
• Update codestyle for first frame step by @jemorrison in https://github.com/spacetelescope/jwst/pull/9170
• JP-3859: Apply code style rules to combine_1d by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9121
• JP-3859: Apply code style rules to master_background by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9123
• Apply code style rules to model_blender by @emolter in https://github.com/spacetelescope/jwst/pull/9157
• JP-3856: Style Updates for Group Scale by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9163
• JP-3856: Code Style Updates to Jump Step by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9159
• JP-3856: Style Updates for Ramp Fitting by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9158
• JP-3855: Style Updates for DQ init by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9161
• JP-3856: Style Updates for Charge Migration by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9162
• increase minimum version of asdf-astropy by @braingram in https://github.com/spacetelescope/jwst/pull/9177
• JP-3765: Update documentation of ramp fitting step arguments by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9176
• JP-3859: Apply code style rules to wavecorr by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9128
• Move common resample code to stcal by @mcara in https://github.com/spacetelescope/jwst/pull/8986
• JP-3879: Fix resample failure to ingest single datamodels from file by @emolter in https://github.com/spacetelescope/jwst/pull/9183
• JP-3856: Style Updates for Gain Scale by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/9164
• JP-3786: Remove hard assigning NONSCIENCE to DONOT_USE in flatfield by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9174
• Fix a bug in resampledwcsfrom_models by @mcara in https://github.com/spacetelescope/jwst/pull/9186
• Apply code style rules to pipelines by @emolter in https://github.com/spacetelescope/jwst/pull/9144
• Use skymatch from stcal by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8901
• Fix unsafe initialization of CubeModel from ImageModel by @emolter in https://github.com/spacetelescope/jwst/pull/9192
• JP-3815: Add support for selecting a list of slit names or source ids… by @stscirij in https://github.com/spacetelescope/jwst/pull/9171
• Document crpix convention for resample step by @mcara in https://github.com/spacetelescope/jwst/pull/9195
• Apply code style checks to skymatch step by @emolter in https://github.com/spacetelescope/jwst/pull/9202
• JP-3852 and JP-3853: Fix imprint associations for NRS IFU by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9190
• Document image group usage for sky matching by @mcara in https://github.com/spacetelescope/jwst/pull/9080
• Fix test for custom WCS for imaging by @mcara in https://github.com/spacetelescope/jwst/pull/9017
• JP-3861: Apply code style changes for pathloss step by @stscirij in https://github.com/spacetelescope/jwst/pull/9203
• use astropy for interpretbitflags by @braingram in https://github.com/spacetelescope/jwst/pull/9212
• JP-3808: Store scaling factor for WFSS data in background step by @emolter in https://github.com/spacetelescope/jwst/pull/9204
• JP-3744: set outlier step default to in-memory processing by @emolter in https://github.com/spacetelescope/jwst/pull/9214
• JP-3812: Add output_ext documentation by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9224
• replace uses of DataModel.write with save by @braingram in https://github.com/spacetelescope/jwst/pull/9219
• JP-3859: Apply code style rules to extract_1d by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9194
• JP-3862: Clean up guider_cds step for code style and CRDS inconsistencies by @tapastro in https://github.com/spacetelescope/jwst/pull/9141
• Fix interpolated flat suffix in MOS/FS case by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9209
• JP-3897: Fix bad input type to median computation for cubemodels in outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/9227
• JP-3858-exptosource by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9201
• JP-3691: Add links to JDox by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9228
• JP-3773: Store logs from calibration pipeline in datamodel by @braingram in https://github.com/spacetelescope/jwst/pull/9211
• test with latest supported Python version by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9217
• Remove mention of unused SOSS reference files in docs by @emolter in https://github.com/spacetelescope/jwst/pull/9041
• JP-3811: Update imprint documentation to mention association input by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9222
• Apply basic code style checks to test configuration files by @emolter in https://github.com/spacetelescope/jwst/pull/9146
• Fix inaccurate warning message for median_error computation by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9247
• JP-3608: Document slit low/high parameters by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9223
• JP-3789 Add more FITS comparison support for regression tests by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9082
• JP-3790 add residual fringe correction to extract1d table by @jemorrison in https://github.com/spacetelescope/jwst/pull/9073
• JP-3858-superbias by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9232
• JP-3848 MIRI LRS s_region and resample WCS by @jemorrison in https://github.com/spacetelescope/jwst/pull/9193
• mention cal_logs in docs by @braingram in https://github.com/spacetelescope/jwst/pull/9257
• JP-3858-srctype by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9239
• JP-3858-white_light by @penaguerrero in https://github.com/spacetelescope/jwst/pull/9241
• Add flexible log_watcher fixture by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9262
• JP-3790: apply aperture correction of residual fringe corrected data by @jemorrison in https://github.com/spacetelescope/jwst/pull/9260
• JP-3915: Bugfix to SIRS kernel subtraction by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/9267
• Apply code style rules to resample by @emolter in https://github.com/spacetelescope/jwst/pull/9248
• JP-3857 update reset step to new code style rules by @jemorrison in https://github.com/spacetelescope/jwst/pull/9264
• JP-3896: Deprecate or remove various assign_wcs utility functions by @emolter in https://github.com/spacetelescope/jwst/pull/9221
• JP-3597: Add new algorithm for EMI fit; clean up existing code by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9216
• JP-3913: Add sirskernel to refpix reference types by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9261
• Import stdatamodels warnings from new exceptions namespace by @emolter in https://github.com/spacetelescope/jwst/pull/9280
• JP-3917: Apply code style rules to engdblog by @pllim in https://github.com/spacetelescope/jwst/pull/9276
• JP-3860: Apply code style rules to assign_wcs by @emolter in https://github.com/spacetelescope/jwst/pull/9255
• Jp 3861 refpix style by @stscirij in https://github.com/spacetelescope/jwst/pull/9234
• JP-3500: Associate pure parallel WFSS grism images with long wave direct images by @tapastro in https://github.com/spacetelescope/jwst/pull/9277
• JP-3914: Catch incomplete extraction gracefully by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9266
• actually remove script as followup to #8957 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9289
• JP-3901: Enable Detector1Pipeline processing of DHS data by @tapastro in https://github.com/spacetelescope/jwst/pull/9243
• JP-3900: Tests, clean up, and code style for residual_fringe by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9242
• JP-3901: Bugfix and regression coverage by @tapastro in https://github.com/spacetelescope/jwst/pull/9304
• metadata for 1.18.0rc1 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/9306
• Backport PR #9326 on branch release/1.18.x (JP-3953: Extrapolate barshadow correction to cover wavelength gaps) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9335
• Backport PR #9338 on branch release/1.18.x (Fix inadvertent removal of all) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9339
• Backport PR #9337 on branch release/1.18.x (JP-3947 Fix MIRI LRS Flux error) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9344
• Backport PR #9301 on branch release/1.18.x (JP-3686: Test using source catalog output as tweakreg abs_refcat) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9346
• Metadata for 1.18.0rc2 by @jhunkeler in https://github.com/spacetelescope/jwst/pull/9354
• Backport PR #9361 on branch release/1.18.x (JP-3978: Allow unequal number of target and psf exposures in calwebb_ami3) by @meeseeksmachine in https://github.com/spacetelescope/jwst/pull/9363
• Revert "Backport PR #9301 on branch release/1.18.x (JP-3686: Test using source catalog output as tweakreg abs_refcat)" by @tapastro in https://github.com/spacetelescope/jwst/pull/9375
• Metadata for release 1.18.0 by @jhunkeler in https://github.com/spacetelescope/jwst/pull/9374
• Metadata release 1.18.0 (sdp) by @jhunkeler in https://github.com/spacetelescope/jwst/pull/9379

New Contributors

• @meeseeksmachine made their first contribution in https://github.com/spacetelescope/jwst/pull/9335

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.17.0...1.18.0

- Python
Published by zacharyburnett 11 months ago

jwst - 1.17.1

What's Changed

• Prepare for post-1.17.0 development by @tapastro in https://github.com/spacetelescope/jwst/pull/9025

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.17.0...1.17.1

- Python
Published by jhunkeler about 1 year ago

jwst - 1.17.0

What's Changed

• use towncrier to handle changelog entries by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8671
• switch default branch name to main in docs/ci by @braingram in https://github.com/spacetelescope/jwst/pull/8210
• [docs] add new steps to pull request checklist as change fragment types by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8824
• add CI check that CHANGES.rst is not modified by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8827
• Remove unnecessary test after pastasoss inclusion by @tapastro in https://github.com/spacetelescope/jwst/pull/8825
• Fix cleanflickernoise test for system differences by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8817
• JP-3728: Deprecate Step.__call__ by @braingram in https://github.com/spacetelescope/jwst/pull/8761
• Speed up regtests by reorganizing testnirspecifu_spec3 by @braingram in https://github.com/spacetelescope/jwst/pull/8811
• JP-3741: Faster temporary file I/O for outlier detection in on-disk mode by @emolter in https://github.com/spacetelescope/jwst/pull/8782
• JP-3763: Fix crash combining full and subarray for background by @thomaswilliamsastro in https://github.com/spacetelescope/jwst/pull/8787
• MNT: Use hash for Action workflow versions and update if needed by @pllim in https://github.com/spacetelescope/jwst/pull/8839
• JP-3768: Move outlier detection median computers to stcal by @emolter in https://github.com/spacetelescope/jwst/pull/8840
• JP-3305: Clean up bad mosaic associations by @tapastro in https://github.com/spacetelescope/jwst/pull/8843
• Fix tolerance for coron test on Linux by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8844
• JP-3768: Fix intermediate issues with non-resampled outlier methods by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8853
• Documentation and code updates clarifying the behavior of the in_memory flag by @emolter in https://github.com/spacetelescope/jwst/pull/8851
• JP-3770: emicorr memory and run time improvement by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8849
• Bump spacetelescope/crds from 12.0.0 to 12.0.2 by @dependabot in https://github.com/spacetelescope/jwst/pull/8862
• Bump actions/checkout from 4.2.0 to 4.2.1 by @dependabot in https://github.com/spacetelescope/jwst/pull/8863
• JP-2928: Update NIRCam WFS regression test data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8867
• JP-2928: Update NIRCam image moving target regression test data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8865
• vendorize and fix crds workflow by @braingram in https://github.com/spacetelescope/jwst/pull/8869
• JP-3705: Remove deprecated nlow and nhigh parameters from outlier detection step by @emolter in https://github.com/spacetelescope/jwst/pull/8870
• JP-3749: Add mypy type checking by @emolter in https://github.com/spacetelescope/jwst/pull/8852
• JP-2928: Move test for moving target updates to unit test by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8873
• JP-2928: Update NIRCam image regression tests by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8871
• fix pre-commit action by @braingram in https://github.com/spacetelescope/jwst/pull/8886
• Use nanmedian3D for TSO data in outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/8859
• JP-2928: Update regression test data for NIRSpec spec2 steps by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8884
• JP-2928: Update regression test data for miscellaneous NIRSpec modes by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8895
• Switch okify to GitHub Actions by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8762
• JP-3347: Improve spectral outlier detection by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8828
• Add CRDS cache information for developers by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8900
• JP-3781: Use center=False for computesregion_imaging by @emolter in https://github.com/spacetelescope/jwst/pull/8897
• JP-2275: put rtdata okify results in unique directories by @braingram in https://github.com/spacetelescope/jwst/pull/8885
• JP-2928: Update NIRSpec WCS regression test data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8875
• JP-2928: Update regression test data for NIRCam subarray by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8881
• Store NIRISS sourcefind regression test catalog in rtdata by @tapastro in https://github.com/spacetelescope/jwst/pull/8902
• JP-3342: Reorganize outlier detection documentation by @emolter in https://github.com/spacetelescope/jwst/pull/8880
• Fix numpy 2 warnings emitted from skymatch by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8892
• JP-3721: Simplify ModelContainer by @emolter in https://github.com/spacetelescope/jwst/pull/8831
• JP-3785: Add tangent plane transform corrections in NIRSpec spectral resampling by @hayescr in https://github.com/spacetelescope/jwst/pull/8908
• JP-3725: Remove DefaultOrderedDict by @emolter in https://github.com/spacetelescope/jwst/pull/8915
• Colorize the test results by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8891
• JP-2928: Update regression test data for NIRSpec lamps by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8898
• JP-3788: Tweak spaxel debugging by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8913
• JP-3787: Use meta.asn.exptype in ModelLibrary by @braingram in https://github.com/spacetelescope/jwst/pull/8918
• Switch resample to the new drizzle package API by @mcara in https://github.com/spacetelescope/jwst/pull/8866
• JP-3750: Fix IFU cube moving target RA, Dec metadata by @emolter in https://github.com/spacetelescope/jwst/pull/8911
• JP-2928: Update NIRCam tsgrism and tsimg regression test data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8877
• JP-3102 follow-up: Catch source_pos nans from msa file by @tapastro in https://github.com/spacetelescope/jwst/pull/8874
• JP-3782: Fix improper setting of AREA extension in coron3 pipeline by @emolter in https://github.com/spacetelescope/jwst/pull/8907
• mention strun package name usage in docs by @braingram in https://github.com/spacetelescope/jwst/pull/8926
• Bump actions/checkout from 4.2.1 to 4.2.2 by @dependabot in https://github.com/spacetelescope/jwst/pull/8929
• Bump actions/setup-python from 5.2.0 to 5.3.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/8930
• JP-2928: Update FGS guider test data, add image3 test by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8923
• JP-2928: Update regression tests to use flight data - settelescopepointing.add_wcs edition by @tapastro in https://github.com/spacetelescope/jwst/pull/8887
• include lib tests xml and db files in package data by @braingram in https://github.com/spacetelescope/jwst/pull/8935
• JP-3426: Ensure proper order of bitwise operations by @tapastro in https://github.com/spacetelescope/jwst/pull/8916
• remove schema_editor by @braingram in https://github.com/spacetelescope/jwst/pull/8909
• JP-2928, JP-3792: MIRI LRS master background by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8927
• AL-837: Compute resample output WCS from known s_region instead of recalculating footprints by @emolter in https://github.com/spacetelescope/jwst/pull/8893
• JP-2928: Update remaining NIRSpec FS and BOTS pre-flight data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8922
• JP-2928: Update data for MIRI dark pipeline tests by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8925
• JP-2928: Update MIRI MRS test data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8936
• JP-2928: Update test data for NIRSpec master background by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8912
• Remove all (including pipeline) uses of Step.__call__ by @braingram in https://github.com/spacetelescope/jwst/pull/8945
• Update changelog and README to reflect patch release by @tapastro in https://github.com/spacetelescope/jwst/pull/8960
• JP-3800 update dark current documentation to remove confusing statement about bias subtraction by @jemorrison in https://github.com/spacetelescope/jwst/pull/8955
• bump min crds for build context by @braingram in https://github.com/spacetelescope/jwst/pull/8950
• don't store empty columns in HDRTAB by @braingram in https://github.com/spacetelescope/jwst/pull/8958
• JP-3798: Transfer datamodel wcsinfo during Spec2Pipeline MOS+FS processing by @tapastro in https://github.com/spacetelescope/jwst/pull/8947
• JP-3746: Improve background combination for NIRSpec MOS master background by @hayescr in https://github.com/spacetelescope/jwst/pull/8932
• restructure testmirimrsbadpixselfcal_bkg to allow it to be okified by @braingram in https://github.com/spacetelescope/jwst/pull/8971
• JP-3799: First frame bright by @karllark in https://github.com/spacetelescope/jwst/pull/8952
• unskip a regression test by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8953
• JP-3771: Add Multiprocessing Regression Tests for Ramp and Jump Steps by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8931
• JP-3742: Remove allowed_memory and associated environment variable by @emolter in https://github.com/spacetelescope/jwst/pull/8975
• Cleanup validationwarning by @braingram in https://github.com/spacetelescope/jwst/pull/8976
• in Badpixel_self cal add log message on number of pixels flagged by @jemorrison in https://github.com/spacetelescope/jwst/pull/8973
• Remove testing statement to ignore import failure by @tapastro in https://github.com/spacetelescope/jwst/pull/8977
• JP- 3778 Allow the RSCD correction to work on segmented TSO data by @jemorrison in https://github.com/spacetelescope/jwst/pull/8946
• update test for numpy 2 compatibility by @braingram in https://github.com/spacetelescope/jwst/pull/8982
• bump asdf upper pin by @braingram in https://github.com/spacetelescope/jwst/pull/8966
• Bump OpenAstronomy/github-actions-workflows from 1.13.0 to 1.14.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/8988
• JP-3677: Add maximumshoweramplitude parameter to jump step by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8890
• avoid file clobbering in okify by @braingram in https://github.com/spacetelescope/jwst/pull/8970
• JP-3598: The ResampleSpecStep and Extract1DStep within MasterBackgroundMosStep are inaccessible by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8847
• JP-3664: Fix shuttrid negative values under numpy 2 by @stscirij in https://github.com/spacetelescope/jwst/pull/8978
• JP-3718: Improve AMI observable averaging, error calculations by @rcooper295 in https://github.com/spacetelescope/jwst/pull/8846
• remove okify_regtests script (moved to ci_watson) by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8957
• Bump OpenAstronomy/github-actions-workflows from 1.14.0 to 1.15.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/8999
• Update MIRI MRS spec3 regtest for new cube defaults by @melanieclarke in https://github.com/spacetelescope/jwst/pull/9002
• [CI] set default CRDS context to jwst-edit by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8987
• JP-3753: Refactor extract1d by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8961
• JP-3739: Update NRM geometry, affine distortion use by @rcooper295 in https://github.com/spacetelescope/jwst/pull/8974
• JP-3745: Fixed SUBSTRIP96 flux drop by @hover2pi in https://github.com/spacetelescope/jwst/pull/8983
• Make sure bounding box is attached as order F by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8963
• rename pytest plugin to pytest_jwst include in wheel by @braingram in https://github.com/spacetelescope/jwst/pull/9009
• pin stcal to commit by @braingram in https://github.com/spacetelescope/jwst/pull/9010
• JP-1136: Compute scaling for WFSS background subtraction using error-weighted mean by @emolter in https://github.com/spacetelescope/jwst/pull/8990
• AL-852: GWCS inverse transform should respect its bounding box by @nden in https://github.com/spacetelescope/jwst/pull/8554
• update minimum deps by @braingram in https://github.com/spacetelescope/jwst/pull/9021
• JP-3622 Update refpix step for NIR detectors to use convolution kernel by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8726
• preparation for 1.17.0 release by @tapastro in https://github.com/spacetelescope/jwst/pull/9024

New Contributors

• @hover2pi made their first contribution in https://github.com/spacetelescope/jwst/pull/8983

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.16.0...1.17.0

- Python
Published by jhunkeler about 1 year ago

jwst - JWST 1.16.1 (DMS build B11.1rc2)

What's Changed

• Add NIRSpec WCS fix to patch branch by @tapastro in https://github.com/spacetelescope/jwst/pull/8933
• Update dependencies in requirements-sdp.txt by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8956

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.16.0...1.16.1

- Python
Published by jhunkeler over 1 year ago

jwst - JWST 1.16.0 (DMS build B11.1rc1)

What's Changed

• add Brett Graham to citation by @braingram in https://github.com/spacetelescope/jwst/pull/8627
• JP-3631: remove direct setting of self.skip within calibration steps by @emolter in https://github.com/spacetelescope/jwst/pull/8600
• RTD: Restore tags for all branches by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8633
• Adding version information to the landing page by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8642
• refactor msa fail/nofail and association duplicate tests to not use caplog by @braingram in https://github.com/spacetelescope/jwst/pull/8628
• move ruff and bandit checks to pre-commit by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8646
• JP-3687: fix outlier_detection failures when run outside pipeline by @emolter in https://github.com/spacetelescope/jwst/pull/8645
• Remove some unused modules by @AlexKurek in https://github.com/spacetelescope/jwst/pull/8630
• RTD: Clear the dirty git index flag by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8644
• remove non-working or out-dated scripts by @braingram in https://github.com/spacetelescope/jwst/pull/8619
• JP-3634: Fix for custom WCS unit test by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8620
• docs(README): link CRDS PUB by @guspan-tanadi in https://github.com/spacetelescope/jwst/pull/8658
• lint jwst/fits_generator and jwst/associations by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8652
• unlink deleted scripts from build metadata by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8659
• JP-3636: Fix crash in tweakreg due to MalformedPolygonError by @mcara in https://github.com/spacetelescope/jwst/pull/8657
• JP-3312 Support Update from RHEL7 to RHEL9 by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8653
• JP-3657: Part 1 of a NIRSpec BOTS speedup by @t-brandt in https://github.com/spacetelescope/jwst/pull/8609
• JP-3668: Move tweakreg into stcal by @emolter in https://github.com/spacetelescope/jwst/pull/8624
• JP-3547: Flux conservation for spectral resampling by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8596
• [SCSB-155] build with Numpy 2.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8527
• fix bug in AmiAverageStep spec that prevents step creation by @braingram in https://github.com/spacetelescope/jwst/pull/8677
• JP-3628: Revise coron3 alignment step by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8643
• Outlier detection refactoring by @braingram in https://github.com/spacetelescope/jwst/pull/8613
• Reset 'seen' flag in log watcher after check by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8686
• JP-3696: Ensure EMICORR correction is never NaN by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8675
• replace usage of copy_arrays=True with memmap=False by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8660
• Remove stsci.image dependency by @braingram in https://github.com/spacetelescope/jwst/pull/8663
• JP-3679: Separate resample_spec parameters from resample step by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8622
• JP-3444: update tso photometry to use ApertureStats by @jemorrison in https://github.com/spacetelescope/jwst/pull/8672
• JP-2928: Update NIRSpec IRS2 detector1 test to use flight data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8687
• don't build for python 3.13 by @braingram in https://github.com/spacetelescope/jwst/pull/8691
• update test to allow easier deprecation of ignore_version_mismatch by @braingram in https://github.com/spacetelescope/jwst/pull/8693
• [SCSB-169] add user input to specify CRDS_CONTEXT by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8702
• [SCSB-170] pin Python<3.13 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8703
• update dep for stcal to released version by @braingram in https://github.com/spacetelescope/jwst/pull/8706
• TST: Use photutils nightly wheel by @pllim in https://github.com/spacetelescope/jwst/pull/8701
• Documentation typo by @tapastro in https://github.com/spacetelescope/jwst/pull/8700
• bump stpipe by @braingram in https://github.com/spacetelescope/jwst/pull/8713
• Update log messages containing newlines by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8696
• Fix a typo in load_custom_wcs by @izkgao in https://github.com/spacetelescope/jwst/pull/8698
• JP-3702: Fix filenames for level3 NIRSpec by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8699
• Add changelog to docs by @braingram in https://github.com/spacetelescope/jwst/pull/8716
• JP-3547: Fix MIRI array sizing for multiple inputs and pixel ratio != 1 by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8727
• JP-3719: Fix names for intermediate spectral outlier detection files by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8735
• JP-3649 Fix cube build error when called from mrsimatch and add deprecated warning for mrsimatch by @jemorrison in https://github.com/spacetelescope/jwst/pull/8728
• JP-3727: changed psfalign product from quadmodel to cubemodel by @emolter in https://github.com/spacetelescope/jwst/pull/8747
• JP-3690: Switch from ModelContainer to ModelLibrary for image3 pipeline by @emolter in https://github.com/spacetelescope/jwst/pull/8683
• Update regression tests to remove missing files from tests by @tapastro in https://github.com/spacetelescope/jwst/pull/8730
• JP-3570: Match NaNs and DONOTUSE flags by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8557
• update pull request checklist by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8670
• JP-3729: log version and crds context at end of step/pipeline runs by @braingram in https://github.com/spacetelescope/jwst/pull/8760
• JP-3730: Re-enable saving of blot models during outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/8758
• Revert "JP-3729: log version and crds context at end of step/pipeline runs" by @braingram in https://github.com/spacetelescope/jwst/pull/8768
• JP-3731: Update association path warning message. by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8752
• JP-3729: report jwst version at end of Step.run by @braingram in https://github.com/spacetelescope/jwst/pull/8769
• JP-3654: NSClean subarray speedup by @t-brandt in https://github.com/spacetelescope/jwst/pull/8745
• JP-3738: Subtract pedestal dark for MIRI MRS when constructing selfcal minimum by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8771
• JP-3669: 'OLS' Conditional Read Noise Recalculation for CHARGELOSS by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8697
• JP-3743: Make outlier detection respect weights for in-memory models by @emolter in https://github.com/spacetelescope/jwst/pull/8777
• JP-3701: Blend models by @braingram in https://github.com/spacetelescope/jwst/pull/8759
• Remove multiline logger by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8781
• rename variable to silence sonarscan by @braingram in https://github.com/spacetelescope/jwst/pull/8784
• JP-3639: Implement 1/f noise correction for ramp data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8669
• JP-3551: Exclude overlapping background candidates by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8744
• Fixed filename conflicts in badpix_selfcal test by @emolter in https://github.com/spacetelescope/jwst/pull/8792
• allow stdatamodels 2.1.0 by @braingram in https://github.com/spacetelescope/jwst/pull/8797
• adjust tolerances for coron registration by @braingram in https://github.com/spacetelescope/jwst/pull/8717
• JP-3733 remove setting pixelreplace.save to True in calwebbspec3 by @jemorrison in https://github.com/spacetelescope/jwst/pull/8765
• JP-3489: Update association expname docs by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8789
• JP-3667: Run nsclean step on imprint and background association members by @hayescr in https://github.com/spacetelescope/jwst/pull/8786
• Fix output collisions in cleanflickernoise tests by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8805
• pin stcal>=1.9.0,<1.10.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8808
• JP-3658: JWST Accommodation of the Ramp Fitting Likelihood Algorithm by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8631
• JP-3593: 2nd group saturation part 2 by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8731
• JP-3305: New association candidate type to group mosaic tiles across targets by @tapastro in https://github.com/spacetelescope/jwst/pull/8798
• Update citations file for build 11.1 by @nden in https://github.com/spacetelescope/jwst/pull/8807
• JP-3564: Rebase nrs deepcopy by @nden in https://github.com/spacetelescope/jwst/pull/8793
• JP-3667: Add safeguards for NSClean on background/imprint members by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8809
• JP-3364 allow wcs shifts for IFU individual exposures in cube_build by @jemorrison in https://github.com/spacetelescope/jwst/pull/8720
• JP-3695: Clean up unnecessary copies by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8676
• JP-3588: Use Pastasoss datamodel for NIRISS SOSS transform solution by @tapastro in https://github.com/spacetelescope/jwst/pull/8763
• Update coron tests for numpy 2 compatibility by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8812
• update metadata for release 1.16.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8810

New Contributors

• @AlexKurek made their first contribution in https://github.com/spacetelescope/jwst/pull/8630
• @guspan-tanadi made their first contribution in https://github.com/spacetelescope/jwst/pull/8658

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.15.1...1.16.0

- Python
Published by zacharyburnett over 1 year ago

jwst - JWST 1.15.1 (DMS build B11.0rc2)

What's Changed

• fix ruff style check by @braingram in https://github.com/spacetelescope/jwst/pull/8615
• add 1.14.1 release to README table by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8617
• minor fixes to outlier detection tso unit test by @braingram in https://github.com/spacetelescope/jwst/pull/8623
• metadata for release 1.15.1 (B11.0rc2) by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8629

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.15.0...1.15.1

- Python
Published by zacharyburnett over 1 year ago

jwst - JWST 1.14.1

[!IMPORTANT] This is a PyPI-only release; the only change from 1.14.0 is to pin Numpy below 2.0

What's Changed

• Pin numpy<2.0 in 1.14.0 release branch, to allow RTD to build by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8566

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.14.0...1.14.1

- Python
Published by zacharyburnett over 1 year ago

jwst - JWST 1.15.0 (DMS build B11.0rc1)

What's Changed

• remove uint8 data types by @mwregan2 in https://github.com/spacetelescope/jwst/pull/8377
• JP-3574: fix stage 2 pipeline steps not respecting output_file parameter by @emolter in https://github.com/spacetelescope/jwst/pull/8368
• JP-3554: Add MSA meta data file docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/8399
• JP-3590: Fix config_asdf doc entry by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8406
• JP-3494: write tweakreg source catalogs into user-specified output_dir by @emolter in https://github.com/spacetelescope/jwst/pull/8386
• JP-3151: Don't make associations for NRS2 IFU if detector not illuminated by @stscirij in https://github.com/spacetelescope/jwst/pull/8395
• JP-3518: Match imprint and science association members by mosaic and dither position by @tapastro in https://github.com/spacetelescope/jwst/pull/8410
• JP-3589: fixed deprecated code from numpy 2.0 release by @emolter in https://github.com/spacetelescope/jwst/pull/8415
• JP-3585: remove deprecated datamodel types by @emolter in https://github.com/spacetelescope/jwst/pull/8388
• JP-3288 use DQ plane in residual_fringe code by @jemorrison in https://github.com/spacetelescope/jwst/pull/8381
• JP-3150: skip extract1d for NIRISS SOSS data in F277W filter by @emolter in https://github.com/spacetelescope/jwst/pull/8275
• Revert 8305 by @braingram in https://github.com/spacetelescope/jwst/pull/8419
• JP-2943: add asnid to outlieri2d filename by @braingram in https://github.com/spacetelescope/jwst/pull/8418
• remove global multiprocessing.setstartmethod by @braingram in https://github.com/spacetelescope/jwst/pull/8343
• JP-3491: Modify MIRI LRS WCS mapping code by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8411
• JP-3543: Allow alternate resampling weight type in outlier detection by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8290
• Remove configuration for non-existant schema tests by @braingram in https://github.com/spacetelescope/jwst/pull/8366
• Fix a bug in how a image group name is determined by @mcara in https://github.com/spacetelescope/jwst/pull/8426
• JP-3587: Clean up NIRSpec IFU flat field SCI/ERR/DQ flagging by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8385
• JP-2980 Documentation improvement for multiprocessing: a script which spawns processes on import will cause system failure by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8408
• JP-3463: Add log message to dark step by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8425
• bump scipy lower pin to fix oldest deps by @braingram in https://github.com/spacetelescope/jwst/pull/8441
• Fix miri avg_dark regtest by @hbushouse in https://github.com/spacetelescope/jwst/pull/8446
• JP-3606: Outlier detection cleanup by @braingram in https://github.com/spacetelescope/jwst/pull/8438
• limit rotation test to 10x the angular repeatability by @braingram in https://github.com/spacetelescope/jwst/pull/8456
• add workflow dispatch trigger to ci by @braingram in https://github.com/spacetelescope/jwst/pull/8455
• JP-3605: Change default value for abs_separation in the tweakreg step by @mcara in https://github.com/spacetelescope/jwst/pull/8445
• JP-3436 Empty wavelength array in s2d products by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8374
• ensure extension modules are present in built wheel by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8462
• JP-3601: Fix background interval edge case by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8433
• JP-3569: Update variance handling in resample step by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8437
• allow ami_analyze step to run on cal files by @braingram in https://github.com/spacetelescope/jwst/pull/8451
• JP-2075: fixed flux scaling issues in wfss_contam by @emolter in https://github.com/spacetelescope/jwst/pull/8416
• JP-3609: Change treatment of MIRI MRS values with no photom info by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8453
• JP-3612: Fix MOS background slit source position by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8461
• clarify checklist in PR template by @braingram in https://github.com/spacetelescope/jwst/pull/8466
• JP-3613: Update error arrays to match NaN in data by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8463
• JP-3595: handling for NIRCam GRISM Time Series Pointing offset SR by @emolter in https://github.com/spacetelescope/jwst/pull/8449
• JP-3604: Fix possible crashes in the alignment to abs catalog by @mcara in https://github.com/spacetelescope/jwst/pull/8450
• JP-3616: Fix NIRSpec FS spec3 slit name by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8470
• remove calls to Step.closeout in tests by @braingram in https://github.com/spacetelescope/jwst/pull/8428
• JP-3311: OutlierDetectionStep producing extraneous outlier_i2d files by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8464
• Regression test for JP-3604 by @nden in https://github.com/spacetelescope/jwst/pull/8477
• adding tests for changes in JP-3311 and minor fixes by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8481
• JP-3603: reorder tweakreg to reduce iterations through models by @braingram in https://github.com/spacetelescope/jwst/pull/8424
• Fix failure in niriss tweakreg test by @mcara in https://github.com/spacetelescope/jwst/pull/8489
• JP-3625: Switch to IRAF starfinder default by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8487
• JP-3614: relaxed tolerance for coron unit test by @emolter in https://github.com/spacetelescope/jwst/pull/8490
• JP-3470: Add ifu covariance scaling to extract1d by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8457
• JP-3121: Updating JWST Ramp Fit Code to Work with New C Extension by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8355
• JP-3632: Change the Spec of Ramp Fitting to Select Algorithm by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8503
• bump stcal to recent 1.7.1 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8505
• remove hard-coded reference file that uses grp path by @braingram in https://github.com/spacetelescope/jwst/pull/8507
• JP-3281: Change resampling defaults to NaN padding instead of INDEF by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8488
• use doubles for filter values used with fft in refpix by @braingram in https://github.com/spacetelescope/jwst/pull/8512
• JP-3566 Move pixel replace before resample/cube build by @jemorrison in https://github.com/spacetelescope/jwst/pull/8409
• JP-3637: Add error propagation during IFU annular background subtraction by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8515
• JP-3584: Use rolling window median for TSO outlier detection by @emolter in https://github.com/spacetelescope/jwst/pull/8473
• JP-3624: Fix a source of errors in resampled spec WCS by @mcara in https://github.com/spacetelescope/jwst/pull/8511
• JP-2922: Use new source_id syntax for level-3 products by @hbushouse in https://github.com/spacetelescope/jwst/pull/8442
• JP-3500 Create WFSS Pure-Parallel associations by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/8528
• Add a check for separation and tolerance in tweakreg by @mcara in https://github.com/spacetelescope/jwst/pull/8476
• JP-2922: Minor fixes for MSA source names by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8533
• JP-3629: Add new non-header keywords in local pool generator by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8508
• JP-3641: Fix error propagation for combine_1d by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8520
• JP-3642: Fix aperture correction to variance arrays by @ianyuwong in https://github.com/spacetelescope/jwst/pull/8530
• JP-3643: Add background error propagation for non-IFU spectral extraction by @ianyuwong in https://github.com/spacetelescope/jwst/pull/8532
• JP-3513: Remove warning about inaccurate errors by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8258
• remove nameformat usage in wfscombine by @braingram in https://github.com/spacetelescope/jwst/pull/8539
• JP-3330: Add NIRSpec wavelength corrections to slit WCS by @hayescr in https://github.com/spacetelescope/jwst/pull/8376
• Fix MIRI LRS spec3 regtest setup by @hbushouse in https://github.com/spacetelescope/jwst/pull/8543
• JP-3567: SIP coefficient accuracy and consistency by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8529
• JP-3173: Add NIRSpec optical path constraints for TSO associations by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8537
• JP-3447: Interpolate errors for replaced pixels by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8504
• JP-2682: Discontinue use of drizpars reference file by @hbushouse in https://github.com/spacetelescope/jwst/pull/8546
• use stpipe.crdsclient.referenceuritocache_path by @braingram in https://github.com/spacetelescope/jwst/pull/8542
• Update README for B10.2 install in Ops by @hbushouse in https://github.com/spacetelescope/jwst/pull/8556
• JP-3584-bugfix: fixed failed save for intermediate (median) files by @emolter in https://github.com/spacetelescope/jwst/pull/8555
• JP-3653: Nsclean speedup by @t-brandt in https://github.com/spacetelescope/jwst/pull/8547
• JP-3635: Account for pixel area ratio in outlier detection blotting by @emolter in https://github.com/spacetelescope/jwst/pull/8553
• JP-3617: Add check for uncalibrated filters for NIRISS SOSS by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8549
• JP-3581: badpix_selfcal step by @emolter in https://github.com/spacetelescope/jwst/pull/8500
• pin numpy<2 by @braingram in https://github.com/spacetelescope/jwst/pull/8565
• Update stcal requirement from <1.6.0 to <1.8.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/8571
• JP-3102: NIRSpec combined MOS/FS processing by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8467
• JP-3659: Fix for output WCS when first data set is empty by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8562
• remove requirements-max.txt by @braingram in https://github.com/spacetelescope/jwst/pull/8574
• remove end in ami log messages by @braingram in https://github.com/spacetelescope/jwst/pull/8568
• Do not set conda version in Jenkinsfile(s) by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8585
• JP-3618: Add intermediate LRS slit wcs reference frame by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8475
• unpin stsci.imagestats by @braingram in https://github.com/spacetelescope/jwst/pull/8577
• JP-3660: extract1d coalescebounds fix by @t-brandt in https://github.com/spacetelescope/jwst/pull/8586
• Update MIRI MRS background documentation table by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8582
• JP-3662: skip photom step for SOSS full-frame non-TSO exposure by @emolter in https://github.com/spacetelescope/jwst/pull/8575
• increase stdatamodels and stpipe versions by @braingram in https://github.com/spacetelescope/jwst/pull/8592
• JP-3665: fix calwebb_tso3 failures for SOSS data in FULL subarray by @emolter in https://github.com/spacetelescope/jwst/pull/8583
• bump GWCS pin to >=0.21.0,<0.23.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8598
• remove unused nlow nhigh parameters from outlier detection by @braingram in https://github.com/spacetelescope/jwst/pull/8595
• JP-3593: Fix 2nd/3rd group saturation for NIRSpec IRS2 by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8593
• JP-3523: Use zero background instead of NaN background where undefined by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8597
• JP-3648: Move NIRSpec FS point source position assignment out of wavecorr by @emolter in https://github.com/spacetelescope/jwst/pull/8569
• Revert "remove unused nlow nhigh parameters from outlier detection" by @braingram in https://github.com/spacetelescope/jwst/pull/8602
• JP-3592: Improve runtime for MIRI emicorr step by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8589
• deprecate nlow nhigh, fix incorrect spec values in docs by @braingram in https://github.com/spacetelescope/jwst/pull/8603
• JP-3671: make OLS_C the default algorithm for ramp fitting by @emolter in https://github.com/spacetelescope/jwst/pull/8607
• release metadata for B11.0rc1 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8604

New Contributors

• @ianyuwong made their first contribution in https://github.com/spacetelescope/jwst/pull/8530
• @hayescr made their first contribution in https://github.com/spacetelescope/jwst/pull/8376
• @t-brandt made their first contribution in https://github.com/spacetelescope/jwst/pull/8547

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.14.0...1.15.0

- Python
Published by zacharyburnett over 1 year ago

jwst - JWST 1.14.0 (DMS build B10.2rc1)

What's Changed

• Reset requirements-sdp.txt after release by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8175
• fixed docstring typo; testing PR workflow by @emolter in https://github.com/spacetelescope/jwst/pull/8178
• JP-3505: Update ASN rules for NRS MOS compromise dither patterns by @hbushouse in https://github.com/spacetelescope/jwst/pull/8184
• JP-3501: Turn off emicorr by default by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8171
• JP-3503: Update outlier detection docs by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8177
• JP-3504: Bugfix for MRS 1d residual fringe correction by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8180
• Update sregion at the end of TweakRegStep by @izkgao in https://github.com/spacetelescope/jwst/pull/8158
• JP-3228: Remove 'grow' param from outlier_detection by @hbushouse in https://github.com/spacetelescope/jwst/pull/8190
• remove sphinx-asdf requirement by @braingram in https://github.com/spacetelescope/jwst/pull/8196
• Update RTD installation instructions by @hbushouse in https://github.com/spacetelescope/jwst/pull/8200
• JP-3088 updated bunit_data for the top multislit model by @jemorrison in https://github.com/spacetelescope/jwst/pull/8189
• JP-3510: Use all groups to flag bad IRS2 reference pixels by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8197
• JP-3238: Include dispersion factor in PHOTOM correction for NRC grism by @stscirij in https://github.com/spacetelescope/jwst/pull/8207
• JP-3509: Cut cube collapse for autocentroiding short of 26 microns by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8199
• JP-2259: Tweakreg source finding by @emolter in https://github.com/spacetelescope/jwst/pull/8203
• require photutils 1.5+ by @braingram in https://github.com/spacetelescope/jwst/pull/8211
• Update min version of tweakwcs to 0.8.6 by @hbushouse in https://github.com/spacetelescope/jwst/pull/8216
• JP-3510: Flag bad refpix within integrations separately by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8214
• Add a warning message in Log to cube_build if not valid data is found on detector by @jemorrison in https://github.com/spacetelescope/jwst/pull/8220
• switch to sphinx rtd theme by @braingram in https://github.com/spacetelescope/jwst/pull/8224
• update regtest conftest for pytest 8 by @braingram in https://github.com/spacetelescope/jwst/pull/8245
• Silence resample test warning by using non-zero data by @jdavies-st in https://github.com/spacetelescope/jwst/pull/8251
• JP-3515: Spec2Pipeline turns off NSClean for BOTS by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8256
• JP-3532: MRS 1d residual fringe treatment of negative values by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8261
• JP-3325: bypass extract1d for SOSS observations in FULL subarray by @emolter in https://github.com/spacetelescope/jwst/pull/8225
• JP-3247: Retrieve pixel area from AREA reference file by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8187
• remove unused test data files by @braingram in https://github.com/spacetelescope/jwst/pull/8266
• Release metadata for 1.13.4 by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8271
• JP-3488 Input files to outlier_detection accidentally deleted by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8263
• JP-3223: Extract2d 'slitname' parameter fails for NRS_MSASPEC slits by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8272
• JP-3499: Handle too much masked data for NIRISS SOSS extractions in extract_1d by @emolter in https://github.com/spacetelescope/jwst/pull/8265
• Update stcal requirement to 1.6.0 by @hbushouse in https://github.com/spacetelescope/jwst/pull/8276
• Fix: models_grouped always return opened data models by @mcara in https://github.com/spacetelescope/jwst/pull/8191
• Use the same iscale value for resampling science data and variance arrays by @izkgao in https://github.com/spacetelescope/jwst/pull/8159
• JP-3483: fix atoca failures due to sparse matrix solver by @emolter in https://github.com/spacetelescope/jwst/pull/8273
• Fix NIRISS imaging regression test by @hbushouse in https://github.com/spacetelescope/jwst/pull/8277
• use tuple of exception classes instead of or by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8267
• JP-3525: Update jump and ramp_fitting docs to merge with stcal docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/8253
• Add SlicedLowLevelWCS support to reproject and fix a bug by @izkgao in https://github.com/spacetelescope/jwst/pull/8172
• JP-3290 Isolate candidate processing into their own pools by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/8227
• Convert tweakreg segmentation connectivity to integer by @jdavies-st in https://github.com/spacetelescope/jwst/pull/8309
• JP-3539: replace all instances of deprecated scipy interp2d by @emolter in https://github.com/spacetelescope/jwst/pull/8291
• Suppress warnings about NaNs in input data from TweakRegStep by @jdavies-st in https://github.com/spacetelescope/jwst/pull/8308
• Add option to preserve reference pixels after IRS2 processing by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8255
• Don't test specific log formatting for spec by @jdavies-st in https://github.com/spacetelescope/jwst/pull/8317
• JP-3423: fixed array shape mismatch in pixel_replace mingrad algorithm by @emolter in https://github.com/spacetelescope/jwst/pull/8312
• increase stdatamodels pins by @braingram in https://github.com/spacetelescope/jwst/pull/8322
• Delete jump step unit test that has been moved to STCAL by @mwregan2 in https://github.com/spacetelescope/jwst/pull/8319
• JP-3540: remove migratedata and movewcs scripts by @emolter in https://github.com/spacetelescope/jwst/pull/8321
• JP-3437: Address alternating column noise for NIRSpec IRS2 by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8143
• pin pytest <8.1 by @braingram in https://github.com/spacetelescope/jwst/pull/8328
• JP-3553: Update background step handling of multi-ints exposures by @hbushouse in https://github.com/spacetelescope/jwst/pull/8326
• replace checkmemoryallocation in resample by @braingram in https://github.com/spacetelescope/jwst/pull/8324
• import bytes2human directly from stdatamodels by @braingram in https://github.com/spacetelescope/jwst/pull/8325
• JP-2090: Update setvelocityaberration to use DataModel by @emolter in https://github.com/spacetelescope/jwst/pull/8285
• JP-3465: Use TMEASURE in resample step by @emolter in https://github.com/spacetelescope/jwst/pull/8212
• JP-3492 LRS spectral images contain pixels with NaN values and DQ = 0 by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8292
• bump gwcs pins by @braingram in https://github.com/spacetelescope/jwst/pull/8337
• JP-3560: Updating CHARGELOSS Flagging by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8336
• JP-3088 fix bunitdata and buniterr for MOS data products by @jemorrison in https://github.com/spacetelescope/jwst/pull/8294
• JP-3541: fixed tweakreg step KeyError due to empty gaia catalog by @emolter in https://github.com/spacetelescope/jwst/pull/8334
• JP-3463: Add averagedarkcurrent handling to dark_current step by @tapastro in https://github.com/spacetelescope/jwst/pull/8302
• Jp-3169 store aperture location in FITS header by @jemorrison in https://github.com/spacetelescope/jwst/pull/8278
• Remove tophat kernel as an available option for resample kernel by @mcara in https://github.com/spacetelescope/jwst/pull/8364
• JP-3534 update to Sky Match docs by @jemorrison in https://github.com/spacetelescope/jwst/pull/8356
• update loadlocalpkg exclude regex with regtest pattern by @braingram in https://github.com/spacetelescope/jwst/pull/8350
• JP-3552: use tmp_path instead of tmpdir, enable no:legacypath as a tox factor by @emolter in https://github.com/spacetelescope/jwst/pull/8327
• JP-3445: Exclude NINTS=1 from SOSS TSO3 associations by @hbushouse in https://github.com/spacetelescope/jwst/pull/8359
• Remove upper pytest pin, switch globals use to fixture in stpipe test by @braingram in https://github.com/spacetelescope/jwst/pull/8347
• JP-2943:Level_3 error: cannot reshape array in image3 pipeline by @stscirij in https://github.com/spacetelescope/jwst/pull/8305
• JP-3533 Update emicorr to run on FAST mode MIRI data by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8270
• JP-3527 Update to docs for IFU outlier detection by @jemorrison in https://github.com/spacetelescope/jwst/pull/8360
• Fix bug in emicorr logic for finding matching ref file info by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8375
• JP-3352 update residual fringe documentation by @jemorrison in https://github.com/spacetelescope/jwst/pull/8371
• JP-3550: Jump multi int by @mwregan2 in https://github.com/spacetelescope/jwst/pull/8304
• JP-3562: Extend snowball core by @mwregan2 in https://github.com/spacetelescope/jwst/pull/8303
• JP-3546: fix deprecations and improve warning filtering by @emolter in https://github.com/spacetelescope/jwst/pull/8320
• [SCSB-145] require Python 3.10 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8365
• update metadata for 1.14.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8380
• JP-3153: post-commissioning AMI3 updates by @rcooper295 in https://github.com/spacetelescope/jwst/pull/7862
• fix fixture for closedfile regtest by @braingram in https://github.com/spacetelescope/jwst/pull/8387
• fix issues flagged by SonarQube by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8391
• update metadata for release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8396

New Contributors

• @emolter made their first contribution in https://github.com/spacetelescope/jwst/pull/8178
• @rcooper295 made their first contribution in https://github.com/spacetelescope/jwst/pull/7862

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.13.4...1.14.0

- Python
Published by zacharyburnett almost 2 years ago

jwst - JWST 1.13.4

What's Changed

• metadata for 1.13.4 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8222
• JP-3501: Turn off emicorr by default by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8171

New Contributors

• @drlaw1558 made their first contribution in https://github.com/spacetelescope/jwst/pull/8171

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.13.3...1.13.4

- Python
Published by zacharyburnett about 2 years ago

jwst - JWST 1.13.3 (DMS build B10.1rc4)

What's Changed

• RampFitStep - accept integer values for maximum_cores by @izkgao in https://github.com/spacetelescope/jwst/pull/8123
• Documentation updates by @hbushouse in https://github.com/spacetelescope/jwst/pull/8156
• Update README to exclude Python 3.12 from supported versions. by @nden in https://github.com/spacetelescope/jwst/pull/8161

New Contributors

• @izkgao made their first contribution in https://github.com/spacetelescope/jwst/pull/8123

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.13.2...1.13.3

- Python
Published by zacharyburnett about 2 years ago

jwst - JWST 1.13.2 (DMS build B10.1rc3)

What's Changed

• JP-3248 MIRI Subarrays 390 Hz EMI bug fix 3 by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8151
• reducing running time for EMICORR step by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8152
• update metadata for 1.13.2 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8155

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.13.1...1.13.2

- Python
Published by zacharyburnett about 2 years ago

jwst - JWST 1.13.1 (DMS build B10.1rc2)

What's Changed

• Fix a typo in version_commit string by @nden in https://github.com/spacetelescope/jwst/pull/8145
• add unit test to confirm step and pipeline all by @braingram in https://github.com/spacetelescope/jwst/pull/8140
• JP-3248: MIRI Subarrays 390 Hz EMI bug fix by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8147
• JP-3248 MIRI Subarrays 390 Hz EMI bug fix 2 by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8148
• update metadata for 1.13.1 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8150

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.13.0...1.13.1

- Python
Published by zacharyburnett about 2 years ago

jwst - JWST 1.13.0 (DMS build B10.1rc1)

What's Changed

• release metadata for 1.12.5 (DMS B10.0.1) by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8010
• astropy wheel is built nightly, not weekly by @pllim in https://github.com/spacetelescope/jwst/pull/8015
• wipe requirements-sdp.txt on main branch by @braingram in https://github.com/spacetelescope/jwst/pull/8025
• increase asdf upper pin by @braingram in https://github.com/spacetelescope/jwst/pull/8018
• allow for slow github mac runners by @braingram in https://github.com/spacetelescope/jwst/pull/8013
• Fix CI for 3.x now using python 3.12 and add python 3.12 tests to CI by @braingram in https://github.com/spacetelescope/jwst/pull/8032
• limit regression test result search to jwst files by @braingram in https://github.com/spacetelescope/jwst/pull/8026
• JP-3035: Fix computation of the photometric keywords PIXAR_* and scale resampled intensities according to actual pixel scale ratio. by @mcara in https://github.com/spacetelescope/jwst/pull/7894
• drop python 3.12 support by @braingram in https://github.com/spacetelescope/jwst/pull/8042
• use --props instead of --build in okify_regtests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8031
• JP-3452: Update logging in imprint step by @hbushouse in https://github.com/spacetelescope/jwst/pull/8041
• JP-3442: Improve image group name construction by @mcara in https://github.com/spacetelescope/jwst/pull/8012
• Add warning in README regarding python 3.12 by @tapastro in https://github.com/spacetelescope/jwst/pull/8057
• JP-3458: Removing cases CI tests to be moved to STCAL. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/8060
• Numpy 2.0 compat: signed/unsigned conversion in context and mask utilities by @mcara in https://github.com/spacetelescope/jwst/pull/8059
• JP-3451: Include zero-valued pixels in difference calculation by @tapastro in https://github.com/spacetelescope/jwst/pull/8038
• JP-3426: Check WFSS background mask against input dq array by @tapastro in https://github.com/spacetelescope/jwst/pull/8070
• JP-3466 Remove the CRDS PUB notices througout the documentation by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/8075
• Make meta data flexible for photutils changes by @larrybradley in https://github.com/spacetelescope/jwst/pull/8066
• JP-3223: Extract2d 'slitname' parameter fails for NRS_MSASPEC slits by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8081
• JP-3469: Replace nanmedian with masked array median in ifu_autocen by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8080
• JP-3456 - Replace use of scipy.signal.medfilt in outlier detection by @braingram in https://github.com/spacetelescope/jwst/pull/8033
• Cube Build fix if no valid data on array by @jemorrison in https://github.com/spacetelescope/jwst/pull/8001
• replace utcnow to avoid deprecation warnings in python 3.12 by @braingram in https://github.com/spacetelescope/jwst/pull/8051
• Update CHANGES.rst by @hbushouse in https://github.com/spacetelescope/jwst/pull/8092
• JP-3471 improve Step.spec attribute formating in docs by @braingram in https://github.com/spacetelescope/jwst/pull/8101
• JP-3473: Include non_science pixels in count of excluded pixels by @tapastro in https://github.com/spacetelescope/jwst/pull/8090
• Remove the use of pkg_resources by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8095
• JP-3455: Updated MIRI imager photom step by @mlibralato in https://github.com/spacetelescope/jwst/pull/8096
• JP-3455: Fix bug in new MIRI imager photom correction by @hbushouse in https://github.com/spacetelescope/jwst/pull/8102
• bump stdatamodels to 1.8.4 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8105
• Partially revert #8042 and add CI in order to allow Python 3.12 support. by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/8093
• use PyPI upload workflow from OpenAstronomy by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7912
• JP-3235: Implement NSClean step for NIRSpec 1/f noise by @hbushouse in https://github.com/spacetelescope/jwst/pull/8000
• JP-3223: Extract2d 'slitname' parameter fails for NRS_MSASPEC slits by @penaguerrero in https://github.com/spacetelescope/jwst/pull/8108
• reorganize tests, make devdeps testing optional, unpin latest Python testing, and prepare for possibility of data caching by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7910
• Fix suffix list test for new nsclean step by @hbushouse in https://github.com/spacetelescope/jwst/pull/8111
• Bump actions/labeler from 4 to 5 by @dependabot in https://github.com/spacetelescope/jwst/pull/8107
• move build configuration into pyproject.toml by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6847
• JP-3357: Pathloss: Implement NIRSPEC MSA correction for slits that aren't 1x1 or 1x3 by @stscirij in https://github.com/spacetelescope/jwst/pull/8106
• JP-3351: Corrections for tweakreg documentation by @mcara in https://github.com/spacetelescope/jwst/pull/8084
• update labeler.yml for labeler v5 by @braingram in https://github.com/spacetelescope/jwst/pull/8117
• JP-3327 Mrs spectral leak by @jemorrison in https://github.com/spacetelescope/jwst/pull/8039
• JP-3485: Zero out fringe weights longward of 27.6 microns by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/8119
• Update stdatamodels requirement from <1.9.0,>=1.8.4 to >=1.8.4,<1.10.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/8122
• Pixel Replace - catch profiles with no valid pixel values by @tapastro in https://github.com/spacetelescope/jwst/pull/8120
• straylight: Fix segfault on memory error in allocxartarrays by @jhunkeler in https://github.com/spacetelescope/jwst/pull/8114
• Update gwcs requirement from <0.20.0,>=0.19.0 to >=0.19.0,<0.21.0 by @dependabot in https://github.com/spacetelescope/jwst/pull/8121
• Fix for 2 shutter uniform correction by @stscirij in https://github.com/spacetelescope/jwst/pull/8126
• WIP: JP-3248 MIRI Subarrays 390 Hz EMI by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7857
• JP-3430: Fix filteroffset ref file doc by @hbushouse in https://github.com/spacetelescope/jwst/pull/8136
• Update infrastructure files to include emicorr by @hbushouse in https://github.com/spacetelescope/jwst/pull/8137
• update metadata for release 1.13.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8141

New Contributors

• @mlibralato made their first contribution in https://github.com/spacetelescope/jwst/pull/8096

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.12.5...1.13.0

- Python
Published by zacharyburnett about 2 years ago

jwst - JWST 1.12.5 (DMS build B10.0.1)

What's Changed

• enable dependabot by @braingram in https://github.com/spacetelescope/jwst/pull/8004
• Bump actions/checkout from 3 to 4 by @dependabot in https://github.com/spacetelescope/jwst/pull/8007
• JP-3440: Revert change clobbering extra pixels near bad reference pixels by @melanieclarke in https://github.com/spacetelescope/jwst/pull/8005
• JP-3438: Allow custom grouping of models by @mcara in https://github.com/spacetelescope/jwst/pull/7997

New Contributors

• @dependabot made their first contribution in https://github.com/spacetelescope/jwst/pull/8007

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.12.4...1.12.5

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.12.4

What's Changed

• keep cube build input models open to allow reading wcs by @braingram in https://github.com/spacetelescope/jwst/pull/7998
• Fix a few Numpy 2.0 deprecation warnings by @nden in https://github.com/spacetelescope/jwst/pull/7999
• Update README for B10.0 version info by @hbushouse in https://github.com/spacetelescope/jwst/pull/8002
• metadata for patch release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/8006

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.12.3...1.12.4

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.12.3 (DMS build B10.0rc4)

What's Changed

• JP-3433: pixel_replace doc updates by @hbushouse in https://github.com/spacetelescope/jwst/pull/7990
• JP-3430: Updates for FilterOffset docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/7991

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.12.2...1.12.3

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.12.2 (DMS build B10.0rc3)

What's Changed

• JP-3363: Fix behavior of charge_migration step around bad pixels by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7895
• JP-3365: Increase MOS cutout margin by @melanieclarke in https://github.com/spacetelescope/jwst/pull/7976
• JP-3431 Ensure that default WCS information is set for Guiding modes that fail pointing determination by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7983
• JP-3429: Flat error propagation by @melanieclarke in https://github.com/spacetelescope/jwst/pull/7978
• MRS adjustments to straylight and 1d residual fringe routines by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7980
• JP-3350: Set all DONOTUSE pixels to NaN after flat field by @melanieclarke in https://github.com/spacetelescope/jwst/pull/7979

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.12.1...1.12.2

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.12.1 (DMS build 10.0rc2)

What's Changed

• JP-2500 Allow cube build to accept a tangent point, position angle and number of spaxels in x, y cube dimensions by @jemorrison in https://github.com/spacetelescope/jwst/pull/7882
• JP-3355 added parameter to extract 1d to override srctype and use point source extraction by @jemorrison in https://github.com/spacetelescope/jwst/pull/7883
• Check input mode type for JP-3355 extract_1d options by @jemorrison in https://github.com/spacetelescope/jwst/pull/7965
• JP-3424 Extend engineering coverage time for guiding modes by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7966
• JP-3342: add median file to outlier_detection cleanup block by @tapastro in https://github.com/spacetelescope/jwst/pull/7961

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.12.0...1.12.1

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.12.0 (DMS build B10.0rc1)

What's Changed

• Modify test_flatfield_step_interface step to not interfere with other tests by @braingram in https://github.com/spacetelescope/jwst/pull/7752
• remove uses of stdatamodels.jwst.datamodels.schema by @braingram in https://github.com/spacetelescope/jwst/pull/7660
• Write user provided x1d background expanded to 2d if save_background=True by @jemorrison in https://github.com/spacetelescope/jwst/pull/7714
• JP-3317: Use same logic for resample limits for SCI, ERR, and VAR* images by @mcara in https://github.com/spacetelescope/jwst/pull/7774
• Run pixelreplace before finalizing cal output in calwebbspec2 by @tapastro in https://github.com/spacetelescope/jwst/pull/7772
• require min version of sphinxrtdtheme for readthedocs by @braingram in https://github.com/spacetelescope/jwst/pull/7787
• remove pymssql dependency from sdp to resolve build issues by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7788
• Fix outlier blot filenames by @jdavies-st in https://github.com/spacetelescope/jwst/pull/7784
• use scipy directly instead of astropy modeling for residual fringe fit by @braingram in https://github.com/spacetelescope/jwst/pull/7764
• JP-3323: Fix pathloss bilinear interpolation coefficients by @melanieclarke in https://github.com/spacetelescope/jwst/pull/7799
• CI fixes: Replace type comparison with isinstance and increase lower pin for asdf by @braingram in https://github.com/spacetelescope/jwst/pull/7801
• JP-3334 Commanded Guide Star postion telemetry is always relative to FGS1 by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7804
• JP-3291 and JP-3319 and JP-2994 Cube build enhancements by @jemorrison in https://github.com/spacetelescope/jwst/pull/7783
• JP-3321: NRS IRS2 refpix bad pixel updates by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7745
• Update Jump Parameter Documentation by @mwregan2 in https://github.com/spacetelescope/jwst/pull/7778
• Fix NIRCam imaging regtest by @hbushouse in https://github.com/spacetelescope/jwst/pull/7808
• JP-3237 Compute correct exposure times for combined images by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7793
• update metadata from 1.11.4 patch release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7818
• re-add quick check for alternative engineering database test by @braingram in https://github.com/spacetelescope/jwst/pull/7780
• Fix spec class attribute for PersistenceStep and RefPixStep by @jdavies-st in https://github.com/spacetelescope/jwst/pull/7803
• JP-3232: Fix NRC coron duplicate product names by @hbushouse in https://github.com/spacetelescope/jwst/pull/7826
• Remove regtest XFAIL for fixed ASN rule by @hbushouse in https://github.com/spacetelescope/jwst/pull/7830
• (JP-3299) Enhancements for undersampling_correction step by @dmggh in https://github.com/spacetelescope/jwst/pull/7740
• JP-3343: Add bounding_box to imaging WCS objects without one by @tapastro in https://github.com/spacetelescope/jwst/pull/7809
• JP-3151: Don't make Lv2 ASNs for empty NRS2 exposures by @hbushouse in https://github.com/spacetelescope/jwst/pull/7833
• JP-3090: Jump parameters missing from documentation by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7839
• JP-3345: Implement mingrad method for MIRI MRS pixel replacement by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7823
• JP-3336: Fix WCS bugs for internal_cal cubes by @melanieclarke in https://github.com/spacetelescope/jwst/pull/7811
• fix false comparison by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7848
• (JP-3337) Renaming of undersamplingcorrection to chargemigration. by @dmggh in https://github.com/spacetelescope/jwst/pull/7825
• JP-3354 Cube build emsm bug by @jemorrison in https://github.com/spacetelescope/jwst/pull/7847
• (JP-3358) Delete undersampling_correction directories by @dmggh in https://github.com/spacetelescope/jwst/pull/7850
• Fix grism tests after transforms update by @tapastro in https://github.com/spacetelescope/jwst/pull/7851
• JP-3356 Remove order dependency on association diffing by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7853
• pin stdatamodels to new release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7854
• JP-3306 MIRI LRS pathloss correction should default to center of slit by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7806
• Allow background accumulation for combinations of full and subarray observations by @thomaswilliamsastro in https://github.com/spacetelescope/jwst/pull/7827
• Update MIRI MRS TSO regtest by @hbushouse in https://github.com/spacetelescope/jwst/pull/7858
• added my name and orcid to Citation.cff by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7859
• remove unsupported system_packages from rtd config by @braingram in https://github.com/spacetelescope/jwst/pull/7860
• increase minimum asdf version by @braingram in https://github.com/spacetelescope/jwst/pull/7861
• JP-3311: OutlierDetectionStep producing extraneous outlier_i2d files by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7845
• JP-3362: Fix MRS time dependent correction for TSO by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7869
• Jump step num cores doc update by @mwregan2 in https://github.com/spacetelescope/jwst/pull/7871
• Re-enable photom correction in MIRI MRS TSO regtest by @hbushouse in https://github.com/spacetelescope/jwst/pull/7874
• use Python 3.11 in regtests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7885
• Removed CI tests duplicating CI tests already performed in STCAL. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7888
• add jsonschema to setup.cfg by @braingram in https://github.com/spacetelescope/jwst/pull/7880
• JP-3233: Combine NRS S200A1+S200A2 data and update source_id handling by @hbushouse in https://github.com/spacetelescope/jwst/pull/7879
• Update testnirspecfs_spec3 regtest for new product naming by @hbushouse in https://github.com/spacetelescope/jwst/pull/7890
• bump versions of stcal and stdatamodels by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7891
• Split NRS IFU spec3 regtest in two tests by @hbushouse in https://github.com/spacetelescope/jwst/pull/7897
• JP-3244: Use source{x,y}pos for NRSFIXEDSLIT and NRS_MSASPEC by @tapastro in https://github.com/spacetelescope/jwst/pull/7796
• JP-2658: Update WCS calculations for the GUIDING modes by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7889
• reduce the parallelism of xdist in the regtests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7896
• Fix ramp_fit reference in docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/7898
• Reset python back to 3.11 for JenkinsRT by @hbushouse in https://github.com/spacetelescope/jwst/pull/7899
• fix deprecations in Numpy 2.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7856
• JP-3372: Fix typo in refpix log statement by @tapastro in https://github.com/spacetelescope/jwst/pull/7902
• JP-3366: Apply fit to normalized profile before rescaling by @tapastro in https://github.com/spacetelescope/jwst/pull/7886
• bump stcal to use numpy 2.0 fixes by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7901
• bump versions of drizzle, tweakwcs, and gwcs by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7904
• JP-3373: Add pixelarea warnings to photom and source_catalog by @hbushouse in https://github.com/spacetelescope/jwst/pull/7905
• release metadata for Build 10 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7907

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.11.4...1.12.0

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.11.4 (DMS build B9.3.1)

What's Changed

• JP-3334 Commanded Guide Star postion telemetry is always relative to FGS1 by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7804

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.11.3...1.11.4

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.11.3 (DMS build B9.3rc4)

What's Changed

• test against pre-built binaries of scipy and numpy by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7581
• Refpix bug fix by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7731

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.11.2...1.11.3

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.11.2 (DMS build B9.3rc3)

What's Changed

• JP-3225: Gaia proper motions enabled by @s-goldman in https://github.com/spacetelescope/jwst/pull/7614
• fix more missing links to stdatamodels docs by @braingram in https://github.com/spacetelescope/jwst/pull/7672
• JP-3254: Update extract_2d docs for WFSS by @hbushouse in https://github.com/spacetelescope/jwst/pull/7684
• JP-3285: Allow negative angles in engineering format. Add support for angle units by @mcara in https://github.com/spacetelescope/jwst/pull/7683
• Fix some minor formatting typos in associations docs by @braingram in https://github.com/spacetelescope/jwst/pull/7694
• remove mistune pin and increase minimum sphinx-asdf version by @braingram in https://github.com/spacetelescope/jwst/pull/7696
• JP-3300: Update spec2 docs on order of operations for SOSS by @tapastro in https://github.com/spacetelescope/jwst/pull/7709
• Trap divide-by-zero in jump step by @mwregan2 in https://github.com/spacetelescope/jwst/pull/7723
• Update some NIRSpec regtests to use flight data by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7620
• JP-3157: Removal of NRS IRS2 intermittently bad pixels by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7685

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.11.1...1.11.2

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST v 1.11.1 (Build 9.3rc2)

datamodels

• Added two new header keywords to track the rate of cosmic rays and snowball/showers [#7609, spacetelescope/stdatamodels [spacetelescope/stdatamodels#173]

jump

• Updated the code to handle the switch to sigma clipping for exposures with at least 101 integrations. Three new parameters were added to the jump step to control this process. Also, updated the code to enter the values for the cosmic ray rate and the snowball/shower rate into the FITS header. [#7609, spacetelescope/stcal#174]

pixel_replace

• Fixed bug in setting the step completion status at the end of processing. [#7619]

ramp_fitting

• Updated the CI tests due to change in STCAL, which fixed bug for using the correct timing for slope computation. Since there are now special cases that use ZEROFRAME data, as well as ramps that have only good data in the 0th group, the timing for these ramps is not group time. These adjusted times are now used. [#7612, spacetelescope/stcal#173]

- Python
Published by nden over 2 years ago

jwst - 1.11.0 (DMS build B9.3rc1)

What's Changed

• metadata for 1.10.2 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7555
• SCSB-63 inject dependency overrides after build by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7553
• Remove use of s3_utils by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7542
• JP-2929 - new version of code without conflicts for MIRI MRS IFU reg test with flight data by @jemorrison in https://github.com/spacetelescope/jwst/pull/7539
• drop support for Python 3.8 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7552
• JP-3027: Update requirement for tweakwcs by @mcara in https://github.com/spacetelescope/jwst/pull/7551
• List pip environment prior to running regression tests by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7558
• remove upper pins on critical dependencies by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7561
• JP-3005: Pixel replacement for flagged pixels before spectral extraction by @tapastro in https://github.com/spacetelescope/jwst/pull/7398
• JP-3005: Fix bad docs update by @tapastro in https://github.com/spacetelescope/jwst/pull/7565
• add more tests to weekly scheduled CI by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7562
• JP-3209: Refactor 1D flat interpolation for NIRSpec flatfield by @melanieclarke in https://github.com/spacetelescope/jwst/pull/7550
• JP-3221: Fixing Segment Length Computation Needed for Optimal Weighting by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7560
• override package dependencies with requirements file when requested by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7557
• pin stcal above 1.3.7 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7567
• JP-3218: Fix pathloss correction for NRS fixed-slit by @hbushouse in https://github.com/spacetelescope/jwst/pull/7566
• Fix inheritance of data models by @nden in https://github.com/spacetelescope/jwst/pull/7571
• Fix tutorial usage of threshold parameter by @tapastro in https://github.com/spacetelescope/jwst/pull/7572
• replace opencv-python with pre-built CPU-only opencv-python-headless by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7570
• replace upper pins on dependencies with requirements-max.txt by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7575
• Fix a bug in tweakreg when using user catalogs with ASN file name inputs by @mcara in https://github.com/spacetelescope/jwst/pull/7578
• add a table of failing unit tests to the CI workflow summary page by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7576
• Fix errors in change log by @hbushouse in https://github.com/spacetelescope/jwst/pull/7580
• JP- 3163 nirspec for Point Source data saved in surface brightness by @jemorrison in https://github.com/spacetelescope/jwst/pull/7569
• JP-3219: Update ASN rules for NRC SW coronagraphy by @hbushouse in https://github.com/spacetelescope/jwst/pull/7556
• JP-3111: Add MIRI segmented dark subtraction test by @hbushouse in https://github.com/spacetelescope/jwst/pull/7582
• JP-3047 Change how NIRSpec wavelengths are set in ifucube by @jemorrison in https://github.com/spacetelescope/jwst/pull/7559
• JP-3098 switch order of precedence between PATTTYPE and SRCTYAPT in the srctype step by @jemorrison in https://github.com/spacetelescope/jwst/pull/7583
• JP-3234: Mask NaN values for background subtraction of "robust mean" by @tapastro in https://github.com/spacetelescope/jwst/pull/7587
• JP-2113: Update NIRCam WFSS transforms to v.4 from GRISMCONF files by @tapastro in https://github.com/spacetelescope/jwst/pull/7018
• JP 3231: address warnings in tests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7584
• Cube Build typo: remove deleting spaxel_dq twice by @jemorrison in https://github.com/spacetelescope/jwst/pull/7586
• JP-1508: fix instructions in README by @nden in https://github.com/spacetelescope/jwst/pull/7585
• JP-3227: Add analog of HST's tweakback tool by @mcara in https://github.com/spacetelescope/jwst/pull/7573
• fix import in tweakback by @nden in https://github.com/spacetelescope/jwst/pull/7591
• Undersampling docs by @jotaylor in https://github.com/spacetelescope/jwst/pull/7589
• Update calwebb_spec2 docs processing order by @hbushouse in https://github.com/spacetelescope/jwst/pull/7593
• Update wfss_contam test data for new transforms + temporary xfail by @tapastro in https://github.com/spacetelescope/jwst/pull/7595
• close files in tests and before raising exception in getopenmsa_slits by @braingram in https://github.com/spacetelescope/jwst/pull/7599
• JP-3229: added the user-supplied flat reference file to the log by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7592
• [CI] run pip list after installing override requirements in Jenkins by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7596
• Revert "JP-3229: added the user-supplied flat reference file to the log" by @hbushouse in https://github.com/spacetelescope/jwst/pull/7604
• inspect and shadow stdatamodels.jwst.datamodels by @braingram in https://github.com/spacetelescope/jwst/pull/7605
• JP-3229: update ref file logging in flat_field step by @penaguerrero in https://github.com/spacetelescope/jwst/pull/7606
• JP-3119: Add special refpix treatment for NIRSpec "edgeless" subarrays by @tapastro in https://github.com/spacetelescope/jwst/pull/7598
• Remove uses and references to deprecated jwst.datamodels.DataModel by @braingram in https://github.com/spacetelescope/jwst/pull/7607
• [CI] bump max version of stdatamodels by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7608
• JP-3224 MRS time dependent Photom correction by @jemorrison in https://github.com/spacetelescope/jwst/pull/7600
• Jp-3207 ifu outlier detection by @jemorrison in https://github.com/spacetelescope/jwst/pull/7590
• JP-3246 added link to top webpage to JWST helpdesk by @jemorrison in https://github.com/spacetelescope/jwst/pull/7610
• JP-3011+JP-3113: IFU Extract1d updates by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7594
• JP-2916: Add Gaia DR3 to available catalogs in tweakreg by @s-goldman in https://github.com/spacetelescope/jwst/pull/7611
• metadata updates for 1.11.0 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7613

New Contributors

• @melanieclarke made their first contribution in https://github.com/spacetelescope/jwst/pull/7550
• @jotaylor made their first contribution in https://github.com/spacetelescope/jwst/pull/7589
• @penaguerrero made their first contribution in https://github.com/spacetelescope/jwst/pull/7592
• @s-goldman made their first contribution in https://github.com/spacetelescope/jwst/pull/7611

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.10.1...1.11.0

- Python
Published by zacharyburnett over 2 years ago

jwst - JWST 1.10.2

What's Changed

• metadata for 1.10.2 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7555

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.10.1...1.10.2

- Python
Published by zacharyburnett almost 3 years ago

jwst - JWST 1.10.1 (DMS build B9.2rc2)

What's Changed

• omit data files from coverage tests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7523
• add fix for JQuery for documentation search by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7524
• use built-in concurrency configuration for duplicate workflows by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7525
• Cube Build JP 3016 allow custom suffix and other improvements by @jemorrison in https://github.com/spacetelescope/jwst/pull/7521
• JP-3172: Update data products docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/7527
• JP-3164: Fix some xfails that are no longer necessary by @tapastro in https://github.com/spacetelescope/jwst/pull/7528
• (JP-3094) NIRSpec FS rateints flat_field processing by @dmggh in https://github.com/spacetelescope/jwst/pull/7516
• PEP8 skymatch by @mcara in https://github.com/spacetelescope/jwst/pull/7532
• Revert "PEP8 skymatch" by @mcara in https://github.com/spacetelescope/jwst/pull/7533
• Cleanup skymatch code and fix PEP8 issues by @mcara in https://github.com/spacetelescope/jwst/pull/7534
• JP-3164: Removing tests that are already handled in STCAL or are unneeded. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7530
• Remove pytest-openfiles by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7526
• remove upper pin on BayesicFitting by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7529
• Fix srctype docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/7536
• JP-3156: Fix SOSS-specific spec_table unit labels by @tapastro in https://github.com/spacetelescope/jwst/pull/7538
• Enable memory saving code in skymatch by @mcara in https://github.com/spacetelescope/jwst/pull/7541
• JP-3164 & JP-2928: Update unit and regression tests by @tapastro in https://github.com/spacetelescope/jwst/pull/7537
• Remove codecov dependency by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7543
• JP-624: Add unit tests to skymatch by @mcara in https://github.com/spacetelescope/jwst/pull/7531
• disable MacOS regression tests on Jenkins by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7544
• re-add latest-commit installs of stdatamodels and stcal by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7547
• metadata for 1.10.1 release` by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7548

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.10.0...1.10.1

- Python
Published by zacharyburnett almost 3 years ago

jwst - JWST 1.10.0 (DMS build B9.2rc1)

What's Changed

• uncomment MacOS in Jenkins by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7445
• Clean up change log and README for B9.1 and 9.1.1 releases by @hbushouse in https://github.com/spacetelescope/jwst/pull/7448
• JP-3024: Allow MIRI LRS fixed slit rateints data through calwebb_spec2 by @tapastro in https://github.com/spacetelescope/jwst/pull/7446
• JP-2821 Correct WCS determination for aperture MIRIM_TAMRS by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7449
• JP-3076 : Move jwst.datamodels to stdatamodels.jwst.datamodels by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7439
• Fix typo in SOSS transform schema by @tapastro in https://github.com/spacetelescope/jwst/pull/7450
• Fix the regtests by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7453
• Revert "Fix typo in SOSS transform schema (#7450)" by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7454
• Properly fix niriss soss schema not found warning by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7456
• Refactor minimum_deps script by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7457
• JP-2813: Allow adjustments of imaging WCS in CAL-like data models by @mcara in https://github.com/spacetelescope/jwst/pull/7430
• JP-3083: Fix photom handling of NRS FS source types by @hbushouse in https://github.com/spacetelescope/jwst/pull/7451
• Require drizzle>=1.13.7 by @mcara in https://github.com/spacetelescope/jwst/pull/7460
• JP-3078: Add support custom reference WCS for the resample step by @mcara in https://github.com/spacetelescope/jwst/pull/7442
• Use astropy nightly build in devdeps Jenkins job by @nden in https://github.com/spacetelescope/jwst/pull/7462
• JP-3077: Change the Computation in Ramps with only One Good Group in the 0th Group by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7461
• JP-3087: Fix zeroing of NaNs in straylight by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7455
• JP-2114: Move the jwst.transforms to stdatamodels.jwst.transforms by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7441
• pin stdatamodels to new release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7465
• JP-3095: Fix extract1d usage of usesource_posn param by @hbushouse in https://github.com/spacetelescope/jwst/pull/7466
• JP-3084: Separate photometric calibration factors for point vs. uniform use by @tapastro in https://github.com/spacetelescope/jwst/pull/7464
• use minimum_dependencies package instead of script by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7463
• pin stdatamodels to new release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7467
• JP-2862: Push DONOTUSE flags to groupdq array from mask by @tapastro in https://github.com/spacetelescope/jwst/pull/7447
• include opencv-python in instructions to generate SDP requirements by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7474
• pull metadata for patch release 1.9.5 into master by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7477
• (JP-3015) Undersampling_correction step by @dmggh in https://github.com/spacetelescope/jwst/pull/7479
• remove upper pins on spacetelescope projects by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7480
• JP-3112 Ensure matched exposures generated by list of candidates continue processing by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7485
• add SDP extras to requirements-sdp.txt by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7487
• update metadata for 1.9.6 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7490
• JP_3100 move straylight before flat fielding by @jemorrison in https://github.com/spacetelescope/jwst/pull/7486
• JP-3106: Fix input NaNs in residual fringe by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7471
• Switch to using dqflags originating from stdatamodels by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7475
• Update outlier_detection step description by @stsci-hack in https://github.com/spacetelescope/jwst/pull/7481
• Fix logic in MIRI LRS spec3 regtest by @hbushouse in https://github.com/spacetelescope/jwst/pull/7497
• JP-3128: Fix memory leaks in C code by @mcara in https://github.com/spacetelescope/jwst/pull/7493
• Bugfix for failing security checks by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7496
• return opencv-python to a hard dependency by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7499
• JP-3127: Fix bounding box in MRS TSO observations by @nden in https://github.com/spacetelescope/jwst/pull/7492
• (JP-3029) Update ramp fitting to calculate separate readnoise variance by @dmggh in https://github.com/spacetelescope/jwst/pull/7484
• JP-3129: Fix WCS correction validation by @mcara in https://github.com/spacetelescope/jwst/pull/7494
• Various doc fixes by @hbushouse in https://github.com/spacetelescope/jwst/pull/7500
• JP-3141: Add undersamplingcorrection call to calwebbdetector1 pipeline by @dmggh in https://github.com/spacetelescope/jwst/pull/7501
• use Python 3.11 in Jenkins job by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7489
• JP-3092: Updated DMS build map in README by @hbushouse in https://github.com/spacetelescope/jwst/pull/7503
• regtests: install main branch commit of stcal and stdatamodels by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7502
• fix MacOS job syntax error by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7504
• use OpenAstronomy workflows and move MacOS jobs to schedule by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7498
• drop --ignore-installed flag to force installing minimum dependencies by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7505
• JP-3144 Remove extra reprocessing of existing associations by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7506
• (JP 3158 ) Update docs for calwebb_detector1 by @dmggh in https://github.com/spacetelescope/jwst/pull/7510
• (JP-3138) Add regtest for calwebb_detector1 for undersampling correction by @dmggh in https://github.com/spacetelescope/jwst/pull/7509
• JP-3147 Treat PSF exposures as science for Level 2 association processing by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7508
• JP-3159: Update surface brightness unit strings for astropy unit parsing by @tapastro in https://github.com/spacetelescope/jwst/pull/7511
• JP-3148: Trap source catalog errors in tweakreg by @hbushouse in https://github.com/spacetelescope/jwst/pull/7507
• add code owners file by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7517
• JP-2622 Find extended Snowballs and Showers by @mwregan2 in https://github.com/spacetelescope/jwst/pull/7478
• use Python 3.9 in non-devdeps regression tests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7519
• JP-3101: Fill TARGRA/DEC with RA/DECREF if empty at end of settelescopepointing by @tapastro in https://github.com/spacetelescope/jwst/pull/7512
• JP-3160: Fix a crash on absolute catalog alignment failure by @mcara in https://github.com/spacetelescope/jwst/pull/7513
• (JP-3126) Clarify text in Jump docs by @dmggh in https://github.com/spacetelescope/jwst/pull/7518
• Windows: MSVC: Allocate waveslicedq array using memallocdq() by @jhunkeler in https://github.com/spacetelescope/jwst/pull/7491
• Use correct bits in resamplevariancearray by @thomaswilliamsastro in https://github.com/spacetelescope/jwst/pull/7515
• metadata for release 1.10.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7522

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.6...1.10.0

- Python
Published by zacharyburnett almost 3 years ago

jwst - JWST 1.9.6 (DMS build B9.1.3)

What's Changed

• Ensure matched exposures generated by list of candidates continue processing by @stscieisenhamer in #7485

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.5...1.9.6

- Python
Published by zacharyburnett almost 3 years ago

jwst - JWST 1.9.5 (DMS build B9.1.2)

patch release; added opencv-python to requirements-sdp.txt

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.4...1.9.5

- Python
Published by zacharyburnett almost 3 years ago

jwst - JWST 1.9.4 (DMS build B9.1.1)

What's Changed

• JP-2928: Update MIRI coron3 test with flight data by @hbushouse in https://github.com/spacetelescope/jwst/pull/7431
• JP-2928: Update regtests to use flight data (NRS_FS) by @tapastro in https://github.com/spacetelescope/jwst/pull/7432
• JP-2928: Update NIRISS AMI3 regtest with flight data by @hbushouse in https://github.com/spacetelescope/jwst/pull/7434
• Pin BayesicFitting to < 3.1.0 by @hbushouse in https://github.com/spacetelescope/jwst/pull/7435
• JP-2928: Update FGS image2 test with flight data by @dmggh in https://github.com/spacetelescope/jwst/pull/7433
• JP-2013 NIRSpec leakcal and nodded exposures by @jemorrison in https://github.com/spacetelescope/jwst/pull/7426
• changes for tox>=4.0 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7384
• JP-3081 NIRSpec Imprints improvement - constrain by observation number by @jemorrison in https://github.com/spacetelescope/jwst/pull/7440
• JP-3079 Ensure all imprint exposures are include in associations by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7438

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.3...1.9.4

- Python
Published by zacharyburnett about 3 years ago

jwst - JWST 1.9.3 (DMS build B9.1rc3)

What's Changed

• update version of conda used in Jenkins environment by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7422
• remove references to pub server by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7421
• Update MIRI LRS regtests by @hbushouse in https://github.com/spacetelescope/jwst/pull/7424
• wfss_contam use datamodel in with context by @braingram in https://github.com/spacetelescope/jwst/pull/7425
• JP-3043 user option to select wavelength range of IFU cube not working for NIRSpec by @jemorrison in https://github.com/spacetelescope/jwst/pull/7427

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.2...1.9.3

- Python
Published by zacharyburnett about 3 years ago

jwst - JWST 1.9.2 (DMS build B9.1rc2)

What's Changed

• pin scipy below 1.10.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7420

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.1...1.9.2

- Python
Published by zacharyburnett about 3 years ago

jwst - JWST 1.9.1 (DMS build B9.1rc2)

What's Changed

• JP-3037 Modify entrypoint functions to not return anything unless failure by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7418

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.9.0...1.9.1

- Python
Published by zacharyburnett about 3 years ago

jwst - JWST 1.9.0 (DMS build 9.1rc1)

What's Changed

• JP-2984: Update ASN rules for NIS_WFSS to keep grisms separate by @hbushouse in https://github.com/spacetelescope/jwst/pull/7351
• (JP-2991) Require asdf-transform-schemas greater than 0.3.0 by @dmggh in https://github.com/spacetelescope/jwst/pull/7352
• JP-3006 Remove defaulting of the is_psf column by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7356
• use pip instead of conda to install certifi, to solve pip freeze issue by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7355
• Fix recently updated regression test by @hbushouse in https://github.com/spacetelescope/jwst/pull/7357
• Update user documentation by @cshanahan1 in https://github.com/spacetelescope/jwst/pull/6919
• (JP-3002) Add SUB400X256ALWB subarray to NIRCam allowed values by @dmggh in https://github.com/spacetelescope/jwst/pull/7361
• JP-3012: Add note for install issue on Mojave by @tapastro in https://github.com/spacetelescope/jwst/pull/7360
• Wrong Python version expected in init.py by @gruselhaus in https://github.com/spacetelescope/jwst/pull/7366
• remove CRDS PUB server from test by @nden in https://github.com/spacetelescope/jwst/pull/7368
• Cache CRDS_PATH reffile contents in CI workflows by @jdavies-st in https://github.com/spacetelescope/jwst/pull/7333
• Add test for duplicate data when resaving model to fits by @braingram in https://github.com/spacetelescope/jwst/pull/7358
• Add missing change log entry for stcal update by @hbushouse in https://github.com/spacetelescope/jwst/pull/7364
• JP-2802: Fix a bug in the definition of NIRSpec resampled WCS by @mcara in https://github.com/spacetelescope/jwst/pull/7359
• use ruff in place of flake8 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7054
• Replace getch with readchar in okify_regtests by @jdavies-st in https://github.com/spacetelescope/jwst/pull/7371
• (JP-3007) Add keywords for source RA and Dec for WFSS extractions. by @dmggh in https://github.com/spacetelescope/jwst/pull/7372
• JP-3009: Add cleanups for files left behind while running tests by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7375
• make tests requiring opencv conditional by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7377
• JP-2988: Update ramp_fit tests for change in saturation flag propagation by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7363
• JP-2998 Extract1D using custom json files by @jemorrison in https://github.com/spacetelescope/jwst/pull/7369
• JP-2900 Redux : Sort combine1d wavelength array prior to creation of spectral wcs by @tapastro in https://github.com/spacetelescope/jwst/pull/7374
• expand CI matrix to test more Python versions by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7378
• JP-2912: Store offsets for WFSS source contamination correction in subarray metadata by @tapastro in https://github.com/spacetelescope/jwst/pull/7343
• JP-2969: Fix MOS handling of source IDs by @hbushouse in https://github.com/spacetelescope/jwst/pull/7379
• JP-3020 Pin PRD versions for tests that are not testing changes in PRD by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7380
• JP-2807: Update ATOCA algorithm by @tapastro in https://github.com/spacetelescope/jwst/pull/6945
• consolidate duplicated job blocks into include: in initial test matrix by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7382
• Fix associations ListCategory enum bug by @jdavies-st in https://github.com/spacetelescope/jwst/pull/7370
• Update deprecation notice to name the CRDS_PATH variable appropriately by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7392
• rebase on top of documentation commits pushed to release branches by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7394
• JP-3019: Remove code trimming zero-valued cube planes by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7391
• JP-3014: Updating CI tests for new NaN values for invalid data in STCAL ramp fitting. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7389
• Rollback stpipe version in setup by @hbushouse in https://github.com/spacetelescope/jwst/pull/7399
• JP-3030: Update slit model to include var_flat by @jemorrison in https://github.com/spacetelescope/jwst/pull/7397
• Rollforward stpipe version in setup by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7400
• Use log instead of print in tweakreg by @mcara in https://github.com/spacetelescope/jwst/pull/7402
• JP-3034: Change import for photutils CircularAnnulus by @hbushouse in https://github.com/spacetelescope/jwst/pull/7407
• Fix incorrect deallocation attempts of unallocated memory in cube builder by @mcara in https://github.com/spacetelescope/jwst/pull/7408
• fix deprecation warnings introduced by Pytest 7.2 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7325
• JP-2013 Fix NIRSpec IFU NOD background subtract and include leakcal in the Level2 associations by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7405
• JP-2921: Add FITS WCS keywords to WFSS mode by @nden in https://github.com/spacetelescope/jwst/pull/7373
• JP-3028 Do not clobber reprocessing lists when Level 2 rules are operating on 'c' type candidates by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7410
• run coverage in parallel by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7411
• test opencv functionality separately by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7414
• replace usages of np.int() with int() by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7403
• Update NIRSpec MOS regtests with flight data by @hbushouse in https://github.com/spacetelescope/jwst/pull/7413
• update reference values for approximation test after GWCS SIP fit change by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7415
• Merge the two update_wcsinfo functions into one by @mcara in https://github.com/spacetelescope/jwst/pull/7412
• Pin tweakwcs version to 0.8.1 and update tweakreg unit test by @mcara in https://github.com/spacetelescope/jwst/pull/7417
• move scripts into subpackage so that they can be packaged with entry_points.console_scripts by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7406
• release procedures for JWST 1.9.0 / DMS build B9.1rc1 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7416

New Contributors

• @gruselhaus made their first contribution in https://github.com/spacetelescope/jwst/pull/7366

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.8.5...1.9.0

- Python
Published by zacharyburnett about 3 years ago

jwst - JWST 1.8.5 (DMS build 9.0)

What's Changed

• Update deprecation notice to name the CRDS_PATH variable appropriately by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7392

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.8.4...1.8.5

- Python
Published by zacharyburnett about 3 years ago

jwst - JWST 1.8.4 (DMS Build 9.0)

• Update CRDS documentation.
• Clarify how to manage a local CRDS cache.

- Python
Published by nden over 3 years ago

jwst - JWST 1.8.3 (DMS Build 9.0)

Publish a note about the CRDS PUB server freeze and deprecation.

- Python
Published by nden over 3 years ago

jwst - JWST 1.8.2 (DMS build B9.0)

What's Changed

• Add note about source catalog pixel indexing by @larrybradley in https://github.com/spacetelescope/jwst/pull/7300
• Revert "JP-2940 Return non-zero status from the settelescopepointin… by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7301
• update metadata for 1.8.2 release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7302

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.8.1...1.8.2

- Python
Published by zacharyburnett over 3 years ago

jwst - JWST 1.8.1 (DMS build 9.0rc2)

What's Changed

• JP-2946: Update NOUTPUTS allowed values by @hbushouse in https://github.com/spacetelescope/jwst/pull/7062
• JP-2970 Allow XML_DATA usage to override PRD specification by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7063
• JP-2932: Adjust rotation convention of IFUalign for MIRI by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7058
• JP-2812 : Allow user-provided custom image catalogs for tweakreg by @mcara in https://github.com/spacetelescope/jwst/pull/7022
• Change to new asdf resource entry point by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/7057
• JP-2909: Expanding Sequence Number Field by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7061
• Fix handling of ASN directory path by the ModelContainer by @mcara in https://github.com/spacetelescope/jwst/pull/7071
• JP-2971 Make the GWCSDrizzle.outcon attribute a property with setter by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7295
• metadata updates for release 1.8.1 (DMS build B9.0rc2) by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7064

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.8.0...1.8.1

- Python
Published by zacharyburnett over 3 years ago

jwst - JWST 1.8.0 (DMS build B9.0rc1)

What's Changed

• starting 1.7.3 development by @nden in https://github.com/spacetelescope/jwst/pull/7041
• JP-2913: Fix the coron median replace algorithm by @hbushouse in https://github.com/spacetelescope/jwst/pull/7044
• Modify default parameters for FITS SIP fitting in the assign_wcs by @mcara in https://github.com/spacetelescope/jwst/pull/7037
• Relax SIP fitting parameters in the tweakreg step by @mcara in https://github.com/spacetelescope/jwst/pull/7038
• check whether requirements-sdp.txt is empty before publishing to PyPI by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7045
• JP-2694: reset input model after Source Catalog Step by @cshanahan1 in https://github.com/spacetelescope/jwst/pull/6942
• JP-2627: Fixes to pixel scale in resample and photometry keywords by @cshanahan1 in https://github.com/spacetelescope/jwst/pull/7033
• JP-2038: Enforcing no path data in association files and expanding documentation by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/7008
• fix definition of pixel ratio by @cshanahan1 in https://github.com/spacetelescope/jwst/pull/7048
• JP-2917: Masterbackground reopens files from asntable, potentially ignoring input datamodels by @tapastro in https://github.com/spacetelescope/jwst/pull/7046
• JP-2918: Fix bad resampled frames for NRS MOS by @hbushouse in https://github.com/spacetelescope/jwst/pull/7047
• JP-2679: Update bkg_subtract to handle 3D coronagraphic data by @dmggh in https://github.com/spacetelescope/jwst/pull/7049
• JP-2927: Fix short spectrum bug in combine1d by @hbushouse in https://github.com/spacetelescope/jwst/pull/7053
• Migrate settelescopepointing to pysiaf-based exclusively by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6993
• Update WCS (or slit metadata) after image (or spectrum) resampling. by @mairanteodoro in https://github.com/spacetelescope/jwst/pull/7042
• JP-2681 add residualfringe to calwebbspec2 pipeline by @jemorrison in https://github.com/spacetelescope/jwst/pull/7051
• use canonical filename for RTD configuration by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7050
• JP-2940 Return non-zero status from the settelescopepointing command-line when an error occurs by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7056
• JP-2679: Update docs to reflect background subtraction update to acc… by @dmggh in https://github.com/spacetelescope/jwst/pull/7055
• JP-2645 - Snowball and Shower flagging in Jump by @mwregan2 in https://github.com/spacetelescope/jwst/pull/7039
• release 1.8.0 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/7059

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.7.2...1.8.0

- Python
Published by zacharyburnett over 3 years ago

jwst - JWST 1.7.2 (DMS Build B8.1.2)

What's Changed

• start post 1.7.1 development by @nden in #7032
• Touch weekly cron test setup by @hbushouse in #7035
• Fix crashes in assign WCS due to uncaught SIP convergence exceptions by @mcara in #7036
• prepare for release 1.7.2 by @nden in #7040

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.7.1...1.7.2

- Python
Published by nden over 3 years ago

jwst - JWST 1.7.1 (DMS Build B8.1.2rc2)

What's Changed

• Update NIRISS WFSS regtest with in-flight data by @hbushouse in https://github.com/spacetelescope/jwst/pull/7012
• Add ORCID for Thomas Williams by @thomaswilliamsastro in https://github.com/spacetelescope/jwst/pull/7014
• Update changelog for 1.7.1 by @nden in https://github.com/spacetelescope/jwst/pull/7016
• JP-2866: Fix photom bug for NIRSpec FS data by @hbushouse in https://github.com/spacetelescope/jwst/pull/7019
• JP-2861: Refactor Asn_Lv2WFSS to better descriminate what direct images should be used by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7010
• JP-2865 Add retries and timeout parameters to engineering access calls by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7025
• JP-2865 Update HTTP status list to include 4xx issues by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/7026
• Fix failing assign_wcs test due to gwcs changes by @mcara in https://github.com/spacetelescope/jwst/pull/7027
• JP-2899: Fix pedestal residual in MRS straylight by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/7013
• JP-2906: Fix wcs attribute names in wfss_contam step by @hbushouse in https://github.com/spacetelescope/jwst/pull/7028
• Remove min_gaia and rename gaia->abs parameters by @mcara in https://github.com/spacetelescope/jwst/pull/7023
• Fix failing regression test due to gaia->abs name changes by @mcara in https://github.com/spacetelescope/jwst/pull/7029
• Fix testsipapprox test for gwcs>=0.18.2 by @mcara in https://github.com/spacetelescope/jwst/pull/7030
• prepare for 1.7.1 release by @nden in https://github.com/spacetelescope/jwst/pull/7031

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.7.0...1.7.1

- Python
Published by nden over 3 years ago

jwst - JWST 1.7.0 (DMS Build B8.1.2rc1)

What's Changed

• JP-2688: Skymatch - Update datamodel data when subtract is True by @mcara in https://github.com/spacetelescope/jwst/pull/6934
• JP-2527: Improve memory usage in outlier_detection and resample by @stsci-hack in https://github.com/spacetelescope/jwst/pull/6904
• JP-2690: Convenience function for updating FITS WCS info by @mcara in https://github.com/spacetelescope/jwst/pull/6935
• JP-2691: Update FITS WCS wcsinfo field at the end of tweakreg by @mcara in https://github.com/spacetelescope/jwst/pull/6936
• automatically add labels to pull requests based on changed files by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6933
• (JP-1754) Match FITS keywords to KWD by @dmggh in https://github.com/spacetelescope/jwst/pull/6941
• Add P_SUBARR to the DarkModel schema (JP-2656) by @dmggh in https://github.com/spacetelescope/jwst/pull/6951
• tweakreg should proceed on errors when updating FITS WCS by @mcara in https://github.com/spacetelescope/jwst/pull/6947
• JP-2707: Fix excessive zeroes in resampled variance by @mcara in https://github.com/spacetelescope/jwst/pull/6954
• Add details on when crds environmentals be defined by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6953
• JP-2797: MRS sigma-clipped master background fix by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/6960
• JP-2672: Remove trailing dash from end of full subchannel listing by @tapastro in https://github.com/spacetelescope/jwst/pull/6959
• JP-2796: Reformatting According to flake8 5.0.3 by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/6958
• JP-2804: Mask NON_SCIENCE pixels when calculating the detection threshold by @larrybradley in https://github.com/spacetelescope/jwst/pull/6940
• Refactor code for updating FITS WCS and increase SIP accuracy by @mcara in https://github.com/spacetelescope/jwst/pull/6955
• Require drizzle>=1.13.6 by @mcara in https://github.com/spacetelescope/jwst/pull/6966
• JP-2677: Copy int_times keywords to output spectrum extensions for SOSS ATOCA by @tapastro in https://github.com/spacetelescope/jwst/pull/6930
• Revert Fourier Transform code to avoid Poppy's recently updated sign convention (JP-2618) by @dmggh in https://github.com/spacetelescope/jwst/pull/6967
• JP-2687: Allow alignment of a single image/group to Gaia bypassing first alignment stage by @mcara in https://github.com/spacetelescope/jwst/pull/6938
• JP-2654 JP-2662: Fix bug in NIRSpec IFU DQ flagging and handling of moving target exposures by @jemorrison in https://github.com/spacetelescope/jwst/pull/6971
• Update template by @nden in https://github.com/spacetelescope/jwst/pull/6969
• Revert "JP-2654 JP-2662: Fix bug in NIRSpec IFU DQ flagging and handling of moving target exposures" by @hbushouse in https://github.com/spacetelescope/jwst/pull/6972
• JP-2578: Add P_READPA to ReadnoiseModel schema by @hbushouse in https://github.com/spacetelescope/jwst/pull/6973
• JP-2814: Exclude pixels flagged with DONOTUSE from source finding by @mcara in https://github.com/spacetelescope/jwst/pull/6974
• JP-2811 Update wcs naxis3 when removing wavelength planes from cube by @jemorrison in https://github.com/spacetelescope/jwst/pull/6976
• JP-2654 JP-2662 Fix bug in NIRSpec IFU DQ flagging and handling of moving target exposures (new try) by @jemorrison in https://github.com/spacetelescope/jwst/pull/6981
• JP-2686: Support user-supplied reference files for stage 2 of WCS alignment by @mcara in https://github.com/spacetelescope/jwst/pull/6946
• Fix some errors and typos in the change log by @hbushouse in https://github.com/spacetelescope/jwst/pull/6979
• add citation and zenodo badge by @nden in https://github.com/spacetelescope/jwst/pull/6978
• JP-2808: Fix handling of SRCTYPE in master background by @hbushouse in https://github.com/spacetelescope/jwst/pull/6980
• pin jsonschema below 4.10.0 to fix issues with unit and regression tests by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6986
• update citation with Citation File Format by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6988
• Fix equality of floats comparisons in telescope pointing test by @jdavies-st in https://github.com/spacetelescope/jwst/pull/6990
• JP-2669: Updating tests due to new STCAL behavior for NaNs in rateints product. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/6949
• JP-2693: Flag groups donotuse after detected ramp jumps by @karllark in https://github.com/spacetelescope/jwst/pull/6943
• JP-2803: Propagate asn keywords to resample output products for level 2 processing by @tapastro in https://github.com/spacetelescope/jwst/pull/6989
• pin asdf to newest patch version to fix dependency for newest jsonschema release by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6991
• JP-2595: Update error propagation docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/6994
• JP-2816: Update outlier docs by @stsci-hack in https://github.com/spacetelescope/jwst/pull/6983
• JP-2799: Updating how the names of files are computed for index association. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/6985
• JP-2055: remove timeconversion and related scripts by @hbushouse in https://github.com/spacetelescope/jwst/pull/6996
• JP-2704 MIRI MRS Failures in Cube when there is no valid data on rate/cal image by @jemorrison in https://github.com/spacetelescope/jwst/pull/6998
• JP-2857: Update readpatt pattern keyword name to follow other pattern keyword names by @tapastro in https://github.com/spacetelescope/jwst/pull/7001
• Add an ORCID to CITATION.cff by @jdavies-st in https://github.com/spacetelescope/jwst/pull/7000
• JP-2819: Populate wavelength extension for MIRI LRS slitless by @tapastro in https://github.com/spacetelescope/jwst/pull/6964
• Update code to use tweakwcs 0.8.0 by @mcara in https://github.com/spacetelescope/jwst/pull/7006
• JP-2678: Expose additional parameters in TweakRegStep. by @mairanteodoro in https://github.com/spacetelescope/jwst/pull/6987
• JP-2859 Bug fix for cube_build when user changes input spatial scale to use for IFU cube by @jemorrison in https://github.com/spacetelescope/jwst/pull/7002
• JP-2863: Add BACKGROUND to MIRI PATTTYPE list by @hbushouse in https://github.com/spacetelescope/jwst/pull/7009
• Expose tweakreg_catalog params in tweakreg by @thomaswilliamsastro in https://github.com/spacetelescope/jwst/pull/7003
• JP-2375: NIRISS V3 of CONF files by @nden in https://github.com/spacetelescope/jwst/pull/6803
• JP-2819: Bugfix - ensure wavelength array is of equivalent shape to data array by @tapastro in https://github.com/spacetelescope/jwst/pull/7005
• prepare for 1.7.0 release by @nden in https://github.com/spacetelescope/jwst/pull/7011

New Contributors

• @mairanteodoro made their first contribution in https://github.com/spacetelescope/jwst/pull/6987

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.6.2...1.7.0

- Python
Published by nden over 3 years ago

jwst - JWST 1.6.2 (DMS build 8.1rc3)

What's Changed

• pin certifi to 2022.5.18.1 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6927
• Update NIS_SOSS regtest with in-flight data by @hbushouse in https://github.com/spacetelescope/jwst/pull/6926
• JP-2676: Fix units of source catalog error array by @larrybradley in https://github.com/spacetelescope/jwst/pull/6928
• JP-2580 update loading of drizpars table by @jemorrison in https://github.com/spacetelescope/jwst/pull/6921
• Fix: skymatch not saving subtracted values for input ASN by @mcara in https://github.com/spacetelescope/jwst/pull/6922
• Document calculation of readnoise variance (JP-2670) by @dmggh in https://github.com/spacetelescope/jwst/pull/6924
• Fix inability of residual fringe code to run on MRS LONG detector by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/6929

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.6.1...1.6.2

- Python
Published by zacharyburnett over 3 years ago

jwst - JWST 1.6.1 (DMS build 8.1rc2)

What's Changed

• Update some regtests with real data by @hbushouse in https://github.com/spacetelescope/jwst/pull/6837
• update pull request template to be more explicit by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6897
• update stpipe requirement to >=0.4.1 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6925

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.6.0...1.6.1

- Python
Published by zacharyburnett over 3 years ago

jwst - JWST 1.6.0 (DMS build 8.1rc1)

What's Changed

• JP-2387: A couple tweaks to the skymatch docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/6891
• JP-2562: Skip tweakreg step when multiple matches to a single reference source are detected by @mcara in https://github.com/spacetelescope/jwst/pull/6896
• JP-2653: Fix IFU variance propagation in extract_1d by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/6892
• copy changelog workflow from asdf by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6890
• JP-2562: Fix code for processing exceptions in tweakreg by @mcara in https://github.com/spacetelescope/jwst/pull/6898
• JP-2661: Variance propagation error by @tapastro in https://github.com/spacetelescope/jwst/pull/6899
• JP-2611: Update saturation handling of NOSATCHECK by @hbushouse in https://github.com/spacetelescope/jwst/pull/6901
• JP-2657: Add unit test for better coverage of recent jump detection code updat… by @dmggh in https://github.com/spacetelescope/jwst/pull/6900
• update setup to use latest stcal release by @hbushouse in https://github.com/spacetelescope/jwst/pull/6902
• JP-2623: Multiprocessing failure in ramp fitting. by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/6880
• Reset requirements-sdp to post-release (empty) state by @hbushouse in https://github.com/spacetelescope/jwst/pull/6903
• JP-2651: Fully Saturated Exposures To Return NoneType by @kmacdonald-stsci in https://github.com/spacetelescope/jwst/pull/6895
• JP-2626: Add check to all lv3_asns to prevent single-obs group candidates by @tapastro in https://github.com/spacetelescope/jwst/pull/6886
• JP-2665: Add MIRI dither pattern SCAN-CALIBRATION by @hbushouse in https://github.com/spacetelescope/jwst/pull/6908
• Update default parameters for source catalog step by @larrybradley in https://github.com/spacetelescope/jwst/pull/6911
• JP-2667: Fix calwebb_tso3 failure when checking for null results by @hbushouse in https://github.com/spacetelescope/jwst/pull/6912
• XFail NRS unit tests for new ref files by @hbushouse in https://github.com/spacetelescope/jwst/pull/6913
• Update NIRCam TSGrism regtest by @hbushouse in https://github.com/spacetelescope/jwst/pull/6914
• JP 2652 Set DQ flags in extract 1d for IFU data by @jemorrison in https://github.com/spacetelescope/jwst/pull/6909
• JP-2633: Add unit to time keyword comment strings by @tapastro in https://github.com/spacetelescope/jwst/pull/6910
• Use datamodels.open in calwebb_coron3 (JP-2116) by @dmggh in https://github.com/spacetelescope/jwst/pull/6855
• Switch to using external wiimatch package by @mcara in https://github.com/spacetelescope/jwst/pull/6916
• JP-2664: Fix NRS-MOS source ids to be 5 digits and positive by @tapastro in https://github.com/spacetelescope/jwst/pull/6915
• JP-2664: Bugfix for source_id reassignment by @tapastro in https://github.com/spacetelescope/jwst/pull/6917
• JP-2663: Update datamodels schemas to match KWD by @hbushouse in https://github.com/spacetelescope/jwst/pull/6918

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.5.3...1.6.0

- Python
Published by zacharyburnett over 3 years ago

jwst - JWST 1.5.3 (DMS build 8.0.1)

What's Changed

• JP-2587 Check spec2 data is IFUImageModel for straylight step by @jemorrison in https://github.com/spacetelescope/jwst/pull/6861
• JP-2612: Speed up algorithm for computing sampling wavelengths by @mcara in https://github.com/spacetelescope/jwst/pull/6860
• Update README and change log by @hbushouse in https://github.com/spacetelescope/jwst/pull/6865
• JP-2603: Catch None return from SOSS F277W in Level3 by @tapastro in https://github.com/spacetelescope/jwst/pull/6863
• Update all docs for zeroframe processing by @hbushouse in https://github.com/spacetelescope/jwst/pull/6868
• JP-2624: Update ami_average for different size inputs by @hbushouse in https://github.com/spacetelescope/jwst/pull/6870
• xfail NIRCam grism tests until ref files are fixed by @hbushouse in https://github.com/spacetelescope/jwst/pull/6871
• JP-1297: Update contribution guide by @cshanahan1 in https://github.com/spacetelescope/jwst/pull/6864
• JP-2637: Only load science members in calwebb_image3 by @hbushouse in https://github.com/spacetelescope/jwst/pull/6875
• JP-2610: Refpix documentation update (with rebase) by @stscirij in https://github.com/spacetelescope/jwst/pull/6872
• Add asdf-standard to dev requirements by @WilliamJamieson in https://github.com/spacetelescope/jwst/pull/6876
• JP-2606: Catch two more SOSS errors raised. by @tapastro in https://github.com/spacetelescope/jwst/pull/6877
• Add a MIRI coron3 regression test by @hbushouse in https://github.com/spacetelescope/jwst/pull/6879
• JP-2604: Update ref file schemas with current CRDS selectors by @tapastro in https://github.com/spacetelescope/jwst/pull/6866
• Fix SIAF default handling for missing SIAF values using pysiaf by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6869
• Reduce memory usage in skymatch by @mcara in https://github.com/spacetelescope/jwst/pull/6874
• Update pointing tests for new SIAF content by @hbushouse in https://github.com/spacetelescope/jwst/pull/6881
• JP-2630: Implement MRS cross-artifact algorithm in MRS straylight correction by @drlaw1558 in https://github.com/spacetelescope/jwst/pull/6873
• JP-2594 Explain about CRDS PUB by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6862
• JP-2016: Flatfield step should ignore flatfield pixels with NOFLAT_FIELD DQ bit set by @stscirij in https://github.com/spacetelescope/jwst/pull/6882
• JP-2123: Update ami_analyze arguments docs by @hbushouse in https://github.com/spacetelescope/jwst/pull/6884
• JP-2647 Fixed bug in selecting values from cubepars reference file by @jemorrison in https://github.com/spacetelescope/jwst/pull/6885
• JP-2650: Fix SourceCatalogStep bug with input filename by @tapastro in https://github.com/spacetelescope/jwst/pull/6889
• JP-2632: Change suffix for Lv3Image members with imaging exptypes and background member_exptype by @tapastro in https://github.com/spacetelescope/jwst/pull/6878
• JP-2655 release 1.5.3 by @zacharyburnett in https://github.com/spacetelescope/jwst/pull/6894

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.5.2...1.5.3

- Python
Published by zacharyburnett over 3 years ago

jwst - jwst v 1.5.2

JWST Build 8.0

Release notes

Association generator software and rules have been updated to:

• fix unnecessarily large memory footprint for large pools
• prevent level 2 and 3 associations for NIRCam TSGRISM exposures on the NRCBLONG (NRCB5) detector
• add valid optical paths for NRS_LAMP exposures, in order to generate or exclude associations for specific lamp, disperser, and detector combinations

Updates to the Level-1b settelescopepointing script to:

• add the "fgsid" option

Updates to Level-2a processing for all exposure modes include:

• enable the use of NIRCam "frame zero" data to estimate slopes for pixels that are saturated in all groups
• reduce memory usage in the dark_current step and improved memory performance of the entire pipeline
• bug fix in "ramp_fitting" for handling CR hits that occur in the first good group after flagged first frames
• fixed the handling of segmented data products in the MIRI "reset" step
• updated the "saturation" step to flag neighbors of saturated pixels, to account for charge spilling

*Updates to Level-2b imaging (calwebb_image2) processing include:

• corrections to the computation of the CRPIXn keyword values
• fixes to the parsing of the FILTEROFFSET reference file used in the "assign_wcs" step

Updates to Level-2b spectroscopic (calwebb_spec2) processing include:

• a fix for spectral tearing in MIRI MRS IFU cubes
• the implementation of the IDT-supplied algorithm for NIRISS SOSS 1-D spectral extraction
• addition of the "background" step parameter "wfssmmagextract", which is used to limit the list of sources used in the computations
• updated the IFU "cube_build" step to use "drizzle" weighting by default, rather than "EMSM"

Updates to the Level-3 imaging (calwebb_image3) processing include:

• changes to some of the default parameter values for the "tweakreg" step, to eliminate errors encountered for some commissioning observations

Updates to the Level-3 spectroscopic (calwebb_spec3) processing include:

• the implementation of the IDT-supplied algorithm for NIRISS SOSS 1-D spectral extraction

- Python
Published by nden almost 4 years ago

jwst - JWST Build 8.0

JWST Build 8.0 rc2

- Python
Published by nden almost 4 years ago

jwst - JWST Build 8.0

JWST Build 8.0 rc1

- Python
Published by nden almost 4 years ago

jwst - JWST Build 7.9.3

Add option --force-level1bmodel.to settelescopepointing.

- Python
Published by nden almost 4 years ago

jwst - JWST Build 7.9.3

- Python
Published by nden almost 4 years ago

jwst - JWST Build 7.9.3

This patch release includes fixes for settelescopepointing.

- Python
Published by nden almost 4 years ago

jwst - JWST Build 7.9.1

The default COARSE tracking algorithm, COARSETR202111, was updated to use FGS1 exclusively.

- Python
Published by nden about 4 years ago

jwst - JWST Build 7.9 rc3

What's Changed

• Open changelog for development by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6555
• Update CRDS dependency by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6567
• SPB-778 Bugfix: JWST dependency uploads occuring with failed regressions by @shahm0 in https://github.com/spacetelescope/jwst/pull/6568
• JP-2277: Add a blurb to step docs with external calls to stcal by @tapastro in https://github.com/spacetelescope/jwst/pull/6566
• update version of stcal to 0.6.0 by @cshanahan1 in https://github.com/spacetelescope/jwst/pull/6570
• JP-2384: Update names of MIRI coronagraphic dither patterns by @tapastro in https://github.com/spacetelescope/jwst/pull/6573
• Prepare changelog for release by @nden in https://github.com/spacetelescope/jwst/pull/6574
• open change log for post 1.4.1 development by @nden in https://github.com/spacetelescope/jwst/pull/6575
• JP-2386: Added MIRI-MRS cross band options to outlier detection by @jemorrison in https://github.com/spacetelescope/jwst/pull/6666
• JP-2024: Update default value of skymatch's 'skymethod' step parameter by @tapastro in https://github.com/spacetelescope/jwst/pull/6580
• JP-2495: Change restriction on Level-2b association creation to nrcimage instead of nrctacq by @tapastro in https://github.com/spacetelescope/jwst/pull/6681
• JP-2385: Changed logic in validation of grism bounding boxes by @tapastro in https://github.com/spacetelescope/jwst/pull/6579
• Prepare for 1.4.2 by @stscieisenhamer in https://github.com/spacetelescope/jwst/pull/6682

New Contributors

• @shahm0 made their first contribution in https://github.com/spacetelescope/jwst/pull/6568

Full Changelog: https://github.com/spacetelescope/jwst/compare/1.4.0...1.4.2

- Python
Published by stscieisenhamer about 4 years ago

jwst - JWST Build 7.9 rc2

1.4.1 (2022-01-15)

dark_current

• Added docs mention of external algorithm in stcal [#6566]

datamodels

• Update names of MIRI coronagraphic flats dither patterns [#6573]

jump

• Added docs mention of external algorithm in stcal [#6566]

• Fix issue in jump detection that occurred when there were only 2 usable differences with no other groups flagged. This PR also added tests and fixed some of the logging statements in two-point difference. [spacetelescope/stcal#74]

linearity

• Added docs mention of external algorithm in stcal [#6566]

ramp_fitting

• Added docs mention of external algorithm in stcal [#6566]

saturation

• Added docs mention of external algorithm in stcal [#6566]

- Python
Published by nden about 4 years ago

jwst - JWST Build 7.9 rc1

1.4.0 (2022-01-10)

ami_analyze

• Call img_median_replace to replace NaN's and pixels flagged with DONOTUSE in the input image. [#6334]

assign_wcs

• Open the specwcs reference file for WFSS modes using the with context manager. [#6160]

• Fix bug in NIRspec where bounding_box can be oversized in height for some of the slits. [#6257]

• Updated create_grism_bbox to be more robust against failures caused by bad input data. [#6309]

• Added a function that, when given RA, Dec, lambda, computes which ones project into a given NIRSpec IFU slice. [#6316]

• Changed inifuslice in util.py to return the indices of elements in slice. Also the x tolerance on finding slice elements was increased. [#6326]

• Fix a bug due to which, under certain circumstances, PC-matrix and CDELT coefficients may be removed from FITS WCS of data products. [#6453]

• Fixed bug in NIRSpec MOS slitlet meta data calculations for background slits consisting of multiple shutters. [#6454]

• Enabled spectral order as input to WCS for NIRISS SOSS mode. [#6496]

associations

• Remove MIRFLATMRS from AsnLv3MIRMRS rule. [#6548]

• Fix bug causing pytest to encounter an error in test collection when running with recent commits to astropy main (5.0.dev). [#6176]

• Enhanced level-2b ASN rules for NIRSpec internal lamp exposures to handle certain opmode/grating/lamp combinations that result in no data on one of the detectors. [#6304]

• Removed ConstraintExtCal from AsnLv2WFSC constraints, as it was redundant with ConstraintImageScience present. [#6384]

• Added constraint to AsnLv2ImageNonScience to prevent creation of asns for NRCTACQ exposures with WFSCLOSJITTER in the DMS_NOTE. Also added new reduce method, Constraint.notall [#6404]

barshadow

• Modify computation of correction array to remove dependencies on the centering of the source within the slitlet, because for extended/uniform sources the centering is irrelevant. This fixes bugs encountered when computing the correction for background signal contained within slits with an off-center point source. [#6454, #6459]

cube_build

• Fix bug when creating cubes using output_type=channel. [#6138]

• Move computationally intensive routines to C extensions and removed miri psf weight function. [#6093]

• Moved cube blotting to a C extension [#6256]

• Moved variable definitions to top of code in C extension to support changes in #6093. [#6255]

• Added weighting option driz (3D drizzling) [#6297]

• Using assignwsc.utils.inifu_slice function to determine which NIRSpec sky values mapped to each detector slice. [#6326]

• Fixed error in final exposure times calculated by blend headers. Only the input models used in the IFU cube are passed to blend headers. [#6360]

• Update of documentation to explain 3d drizzling and remove miri psf weighting [#6371]

• Fix a bug when creating internal_cal type cubes [#6398]

• Fix incorrect spatial footprint for single band MRS IFU cubes [#6478]

dark_current

• Refactored the code in preparation for moving the code to STCAL. [#6336]

• Moved dark current code from JWST to STCAL. [spacetelecope/stcal#63] [#6444]

• Updated step docs to explain unique form of MIRI dark reference data [#6529]

datamodels

• Remove astropy.io registration of JwstDataModel. [#6179]

• Update VELOSYS keyword comment [#6298]

• Added new keywords FPESIDE and ICESIDE to core schema [#6314]

• Fix bug preventing extra arguments when calling datamodels.open on an ASDF file. [#6327]

• Implement memmap argument when calling datamodels.open on an ASDF file. [#6327]

• Fix bug in schema that disallowed valid p_grating values. [#6333]

• Add NDArrayType to list of valid types for RegionsModel.regions. [#6333]

• Fix a bug in wcsrefmodels where SpecwcsModel was failing the SimpleModel validation as it contains a list of models rather than one simple model. Also add some missing allowed BAND values for MIRI MRS distortion and regions files. Fix an incorrect comment on FilteroffsetModel. [#6362]

• Changed reference file model name from ResidualFringeModel to FringeFreq [#6385]

• Updated data products documentation to indicate that variance and error arrays are now included in resampled products. [#6420]

• Added SOSS-specific extraction parameters to core schema; add new datamodel to store SOSS model traces and aperture weights [#6422]

• Added the MirLrsPathlossModel for use in the `pathloss step. [#6435]

• Added new column 'referenceorder' to 'plannedstartable' in guiderraw and guider_cal schemas [#6368]

• Moved new column 'referenceorder' in guider schemas' planned star table to second in order, after 'guidestar_order' [#6465]

• Updated movingtarget schema changing mtdetectorx/y to mtsci_x/y [#6485]

• Fixed names of NIRISS SOSS extract_1d parameter keywords to be legal FITS [#6499]

• Update PATTTYPE enum values to match spellings used in keyword dictionary [#6501]

• Updated documentation to point to stdatamodels.util for calls to createhistoryentry [#6537]

• Added keyword EXP_TYPE to PsfMaskModel schema [#6540]

• Updated FILTEROFFSET reference file docs to add NIRCam information. [#6541]

dark_current

• Fixed bug during save of optional averaged darks output, bug with providing step a file instead of a datamodel, added regression test [#6450]

documentation

• Update text to point to the JWST CRDS website. [#6549]

extract_1d

• Updated to propagate SRCTYPE keyword during extraction of MIRI LRS fixed-slit inputs that are in SlitModel form. [#6212]

• Assign 0-indexed integration number to INTNUM if input INTTIMES table is empty. [#6369]

• Change INT_NUM assignment to 1-indexed. [#6388]

• Added NRSLAMP as an exptype that has the extract1d ref file in asdf format [#6460]

• Added the center_xy step argument to allow user-specified x/y center of IFU extraction apertures [#6503]

• Delivery of new algorithm ATOCA for SOSS extraction, along with four new reference files: speckernel, specprofile, spectrace and wavemap. [#6467]

• Added step parameter soss_atoca to turn ATOCA algorithm on, with box extraction the default algorithm [#6551]

flatfield

• Updated flatfield step docs to include complete details on how the variance and error arrays are updated. [#6245]

• Fixed a bug in flatfield for NIRSpec BrightObj mode where the S-flat cutout was calculated incorrectly by not accounting for the slit offset [#6332]

• Added check to NRS_LAMP exposures that routes imaging exposures to the imaging half of flatfield, where they will skip the step as expected [#6462]

jump

• Updated jump detection step to use common code moved to stcal [#6089]

• In stcal (pr #72), several changes were made to fix existing bugs in the twopoint difference routine for jump detection. Some of these issues resulted in jumps erroneously being flagged for pixels with only two usable groups (i.e one usable difference). This PR on the JWST side fixes one of the unit tests to account for this. [#6552]

lib

• Implement the MAST AUI interface to the Engineering Database. [#6288]

• Fix ROLLREF and angleto_vector calculations [#6452]

• Fix bad implementation of angle_to_vector in set_telescope_pointing. [#6452]

• Use TRACK algorithms for moving target exposures. [#6452]

• Move setting of the default method to calc_transforms. [#6482]

linearity

• Use the common code in STCAL for linearity correction. [#6386]

• Update of linearity test to support STCAL PR65 [#6509]

outlier_detection

• Revert back to using 'linear' interpolation method as default for blot. The bug in the implementation of the bilinear interpolator in the drizzle package is now fixed. [#6146]

• Log number of flagged outliers in outlier_detection [#6260]

pathloss

• Updated the pathloss step and documentation to include processing of MIRI LRS fixed-slit exposures. [#6435]

persistence

• Changed logger from root to __name__ [#6389]

pipeline

• Added wfsscontam step to `calwebbspec2` pipeline flow for WFSS modes [#6207]

• Changed logger from root to __name__ for Ami3, Detector1, Dark, and Guider Pipelines [#6389]

• Updated the calwebb_spec2 pipeline to apply the pathloss step to MIRI LRS fixed-slit exposures. [#6435]

ramp_fitting

• Fix special handling for 2 group ramp. [spacetelescope/stcal#70]

• Fix issue with inappropriately including a flagged group at the beginning of a ramp segment. [spacetelescope/stcal#68]

• Pixels with negative median rates will have VAR_POISSON set to zero. [spacetelescope/stcal#59]

• Update RampFitStep to pass DQ flags as a parameter to the ramp_fit algorithm code in stcal. Bump version requirement for stcal. [#6072]

refpix

• Refactored the subtract_reference routine for NRS IRS2 data to reduce memory usage. [#6356]

• Updated bad link to JDox in the step documentation. [#6372]

regtest

• Update okifying to handle full folder updates for associations [#6218]

• Remove default cfg usage from all relevant regtests; replaced with either pipeline alias or Step instance [#6391]

resample

• Refactor resample_spec to use a separate function for computing the output rectified WCS for lamp data. [#6296]

• Fix a crash in resample_spec due to undefined variance arrays. [#6305]

• Fix handling of weight_type parameter to allow for user override. [#6406]

• Add support for specifying custom output WCS parameters to the resample step. [#6364]

• Make output_shape to be in the "normal" (nx, ny) order. [#6417]

• Updated drizzle version to 1.13.4 which contains a fix for the bug due to which some 0-weight input pixels may contribute to the output image. [#6517]

• Updated step docs to indicate that the default weighting type is now "ivm" [#6529]

• Fixed a bug in the ResampleSpecData.build_interpolated_output_wcs() due to which, under cerain circumstances, computed output image shape could be very large resulting in (very) large memory usage and/or incorrect output WCS. [#6533]

residual_fringe

• Added documentation on step [#6387]
• Fixed incorrect data model name [#6487]
• Added user option to give wavelength range that no correction will be applied [#6545]

skymatch

• Improved reliability when matching sky in images with very close sky footprints. [#6421]

• Updated code in skymatch.region.py with latest improvements and bug fixes from stsci.skypac.regions.py. [#6451]

• Updated documentation to clarify details of flat-fielding versus distortion corrections [#6546]

source_catalog

• Fixed issue with non-finite positions for aperture photometry. [#6206]

• Fixed the documentation for bkg_boxsize to reflect that its data type should be integer. [#6300]

• Renamed filter_kernel to kernel in the call to detect_sources to match the new name of the argument in photutils. [#6527]

wavecorr

• Location of source in NIRSpec fixed slit updated (keywords SCRCXPOS, SRCYPOS). [#6243, #6261]

• Fixed the computation of model.slits[i].source_xpos for Nirspec fixed slit data. [#6457]

wfs_combine

• Changed method of loading input association from datamodels.load() to Step.loadaslevel3_asn() to prevent error when target acq exposure not present [#6464]

wfss_contam

• Updated to process all defined spectral orders for the grism mode [#6175]

• Added step documentation [#6210]

• Fixed handling of filter/pupil names for NIRISS WFSS mode [#6233]

- Python
Published by stscieisenhamer about 4 years ago

jwst - 1.3.3

What's Changed

• Avoid photutils 1.2.0 [#6378]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST Build 7.8.2

Changes in jwst 1.3.2

associations

• Enhanced level-2b ASN rules for NIRSpec internal lamp exposures to handle certain opmode/grating/lamp combinations that result in no data on one of the detectors. [#6304]

cube_build

• Fix bug when creating cubes using output_type=channel. [#6138]

• Move computationally intensive routines to c extensions and removed miri psf weight function. [#6093]

• Moved variable definitions to top of code in c extension to support changes in #6093. [#6255]

• Moved cube blotting to a c extension [#6256]

pipeline

• Updated calwebbtso3 to be more robust in handling null results from the ``tsophotometry`` step. [#6265]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST Build 7.8.1

Changes in jwst v1.3.1

lib

• Fixed a bug in settelescopepointing that was setting wrong meta for the pointing quality [#6264]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST Build 7.8.1

Changes in jwst v1.3.0

associations

• Ensure no Lv3_WFSC associations created on group candidates [#6131]

datamodels

• Add new PATTTYPE values for MIRI Coronagraphic flats: 4QPMLFLAT, 4QPMPFLAT, LYOTLFLAT, LYOTPFLAT. [#6232]

• Update DarkModel to use uint32 for DQ array. [#6228]

• Add NOUTPUTS keyword to the DarkModel schema. [#6213]

lib

• Add overriding of the matrix calculations to set_telescope_pointing.py [#5843]

• Add guide star-based pointing algorithm to set_telescope_pointing.py [#5843]

resample

Fix the extreme memory consumption seen in resampling of variance arrays. [#6251]

tweakreg

• Add an upper tweak threshold of 10 arcsec to tweakreg [#6252]

wfs_combine

-- Add option to flip the dither locations so that images with different filters will have the same pixel locations [#6101]

-- Fixed the refine option to correctly use the cross correlation to align the images if the WCS is off [#6101]

- Python
Published by nden over 4 years ago

jwst - JWST Build 7.8

Release Notes

The JWST calibration pipeline (v1.2.3) has been made available for installation on PyPi and github. A high-level list of updates in this build is given below.

Association generator rules updates

• Properly segregate NIRCam + NIRISS parallel Wide Field Slitless Spectroscopy (WFSS) exposures by instrument
• Process MIRI MRS dedicated background observations as stand-alone science
• Only associate direct images obtained using the same instrument channel with WFSS grism images
• Generate "spec3" associations for MIRI MRS observations that don't use a dither pattern
• Don't create ASN's for NIRCam Engineering Template exposures that use EXPTYPE='NRCGRISM' and PUPIL='CLEAR'
• Only use exposures from other primary nod positions as background members for NIRSpec fixed-slit observations that employ sub-pixel dithering

Updates to the Level-1b settelescopepointing script to:

• Moved the JWST[XYZ] and JWSTD[XYZ] keywords from the primary header to the SCI extension header

Updates to Level-2a processing for all exposure modes include:

• Updated the "refpix" step to properly handle subarray exposures that use 4 amplifiers for readout
• Updated the "jump" step to detect jumps in integrations containing only 3 or 4 groups
• Refactored the Ordinary Least Squares (OLS) algorithms in the "ramp_fit" step

Updates to Level-2b processing for all exposure modes include:

• Fix the computation of S_REGION for exposures that straddle the RA=0 boundary
• Added new step parameter to the "background" step that allows saving the combined background image

Updates to Level-2b spectroscopic (calwebb_spec2) processing include:

• Updated the "srctype" step to populate SRCTYPE based on the "is_extended" flag for WFSS exposures
• "cube_build" step updates to improve processing efficiency
• Implemented variance and error propagation in the "extract_1d" step

Updates to the Level-3 imaging (calwebb_image3) processing include:

• Updated the "resample" step to propagate variance and error arrays
• Modified the "source_catalog" step to compute photometric errors
• Modified the "sourcecatalog" step to store "isextended" instead of "is_star" for each source
• Modified the "source_catalog" step to compute concentration indexes as flux ratios instead of magnitude differences

Updates to the Level-3 spectroscopic (calwebb_spec3) processing include:

• Updated the "resample_spec" step to propagate variance and error arrays
• "cube_build" step updates to improve processing efficiency
• Implemented variance and error propagation in the "extract_1d" step

Updates to the Level-3 TSO (calwebb_tso3) pipeline include:

• Modified the "outlier_detection" step to use simple sigma clipping up the stack of integrations within an exposure

Updates to the Level-3 AMI (calwebb_ami3) pipeline include:

• Fix sign error in AMI pupil phase results

The complete change log follows:

datamodels

• Add back and use "CALCULATED" for ENGQLPTG. [#6135]

• Convert incoming Path objects to strings in datamodels.open [#6130]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST Build 7.8 rc3

ami_analyze

• Fix to AMI pupil phases sign error [#6128]

datamodels

• Update moving target schema to match b7.8 keyword schema. [#6129]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST Build 7.8 rc2

associations

• Asn_Lv2WFSS: Add instrument constraint. [#6114]

• Asn_Lv2NRSLAMPSpectral: Allow msaspec only if msametfl is available. [#6085]

combine_1d

• Added SRCTYPE to COMBINE1D output extension headers, propagated from EXTRACT1D inputs [#6079]

cube_build

• Fix some typos in the the arguments documentation. [#6077]

datamodels

• Updated enum lists for ENGQLPTG and PATTTYPE keywords [#6081]

• Removed obsolete keyword NDITHPTS and updated attributes for NRIMDTPT [#6083]

• Added units to CombinedSpecModel table output [#6082]

• Added keywords OSSVER, DETMODE, CMDTSEL, NODTYPE, and GSV3_PA to the core schema [#6086]

• Remove ModelContainer schema and refactor use of association table metadata within. [#6094]

general

• Make CRDS context reporting pytest plugin disabled by default. [#6070]

• Removed all usage of sys.path, in associations and jwst.stpipe [#6098]

lib

• Updated settelescopepointing to populate ENGQLPTG keyword with new allowed values [#6088]

outlier_detection

• Avoid using 'linear' interpolation method as default for blot due to a bug in the implimentation of the bilinear interpolator in the drizzle package. Now the default value will be 'poly5'. [#6116]

ramp_fitting

• Re-enable multiprocessing in RampFitStep by moving code back from stcal package. [#6119]

scripts

• Add migratedata command with support for migrating spectable in x1d files produced with <= 1.1.0 of this package. [#6055]

tweakreg

• Remove attached tweakreg catalog from datamodel before exiting step [#6102]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST Build 7.8 rc1

ami_analyze

• Create copy of input datamodel to avoid overwriting input. [#5828]

assign_wcs

• Convert the ra values to array in util.wrap_ra, but if input is a list return a list [#6031]

• Moved the routine wrapra from cubebuild to assignwcs.util. The sregion is now correct for data that cross ra boundary. [#6026]

• Changed evaluation of grism bounding box center from averaged extrema of transformed bounding box to transformed centroid of source_cat object [#5809]

• Added pixel shift to MSA slits due to 0-indexing in NIRSpec slit validation code, fixing difference between bounding box locations during the separate halves of assign_wcs runs [#5927]

• Added logic to prevent the sending of an empty list of slits to the validateopenslits function, so a proper error message is provided to the user [#5939]

• Added computed spectral_region to model.meta.wcsinfo. [#5969]

associations

• Add rule Asn_MIRMRSBackground to treat background as science. [#6046]

• Updated level2b WFSS rules to only consider exposures from the same instrument channel when matching direct images with grism images in NIRCam WFSS observations. [#5786]

• Removed PATTTYPE='None' constraint from Lv3MIRMRS association rule to generate spec3 associations for undithered MRS observations. [#5804]

• Updated level2b WFSS rules to only consider exposures using the same PUPIL value (cross filter) when matching direct images with grism images in NIRISS WFSS observations. [#5896]

• Updated level2b and level3 TSO rules to exclude exposures with EXPTYPE=NRCTSGRISM and PUPIL=CLEAR, which can result from NIRCam engineering template observations. [#5946]

• Updated level2b NIRSpec FS rules to exclude exposures sharing a primary dither location from the list of background exposures [#5994]

background

• Remove unused SubtractImagesStep [#5919]

• Added new step parameter to optionally save the combined, average background image: save_combined_background. [#5954]

calwebb_spec2

• Updated documentation to indicate that masterbackground is applied to NIRSpec MOS exposures in the calwebbspec2 pipeline [#5913]

calwebb_spec3

• Updated documentation to indicate that masterbackground is applied to NIRSpec MOS exposures in the calwebbspec2 pipeline [#5913]

csv_tools

• The csv_tools subpackage was removed [#6006]

cube_build

• Fixed typo in CubeBuildStep spec for grating [#5839]

• Update code to read in spectral and spatial size of exposure on the sky [#5991]

• For calspec2 pipeline skip determining the dq plane in cube_build [#5991]

• Remove certain WCS keywords that are irrelevant after cube_build. [#6032]

datamodels

• Added is_star to slitmeta [#5788]

• Update keyword comments for NIRSpec grating wheel (GWA) keywords [#5844]

• Moved functions in dqflags and dynamic_mask to stcal [#5898]

• API change - stcal.dqflags.interpret_bit_flags and stcal.dynamicdq.dynamic_mask now require the mnemonic_map as input. [#5898, #5914]

• Implemented new data models SpecKernelModel, SpecProfileModel, SpecTraceModel, and WaveMapModel for use by new NIRISS SOSS reference files in optimized 1D extraction [#5925]

• Added FULLP to SUBARRAY enum list in core, subarray, and keyword_psubarray schemas [#5947]

• Moved JWST[XYZ] and JWST[DXDYDZ] keywords from primary to SCI extension header and updated their comment fields to indicate they'll now be in the barycentric frame. Also added the new OBSGEO[XYZ] keywords to the SCI extension header, which are in the geocentric frame. [#6050]

• Added a new datamodel, SegmentationMapModel that has an uint32 data array for storing the segmentation map output from source_catalog. [#6051]

documentation

• Update documentation, deprecating primary use of CFG files [#5901]

• Update pipeline introduction document to include segmentation map (segm) in list of data products [#5956]

• Update assign_mtwcs step docs and reference the assign_mtwcs step in the calwebb_image3 and calwebb_spec3 pipeline docs [#6024]

extract_1d

• Implemented error and variance propagation for all modes but those utilizing IFU cubes [#6014]

extract_2d

• For WFSS removed setting srctype to UNKNOWN; added setting is_star in slitmeta [#5788]

• In NRC_TSGRISM mode replaced FITS WCS keywords with JWST specific ones. [#6005]

• Added specsys to slits. [#6005]

general

• Update file naming conventions documentation to clarify when optional components will be used. [#5796]

• Update DQFLAGS table in RTD docs with new definitions for persistence and ad_floor in bits five and six [#5815]

• Update data products, calwebb_image3, and source_catalog docs to include information about the segmentation map product [#5949]

• Replace documentation references to ambiguous class names with full paths. [#6017]

jump

• Update the step to detect jumps in three and four group integations [#5915].

• Change the default S/N ratio for not flagging neighbors to be a higher value to better reflect the correct IPC.

lib

• Update update_mt_kwds function in set_telescope_pointing.py to populate the TARGRA/TARGDEC [#5808]

• moved basic_utils.multiple_replace to stcal. [#5898]

• Implemented window clipping algorithm for WFSS contamination corrections. [#5978]

• Updated set_velocity_aberration and utc_to_tdb to access the JWST position and velocity keywords from the SCI extension header, rather than the primary header. [#6050]

master_background

• Updated documentation to more fully describe the various ways in which the step is applied [#5913]

outlier_detection

• Outlier detection on non-dithered images is implemented with a simple sigma clipping, dithered outlier detection cleaned up and HST specific steps removed and additional tests added. [#5822]

ramp_fitting

• Refactoring OLS code for ramp fitting to improve readability and maintenance. Also, reference to nreads is being removed and replaced with ngroups to remove and confusion on functionality. [#5872]

• Refactoring ramp fit code separating OLS and GLS code into their own file. [#5951]

• Refactoring ramp fit code in preparation for moving code to STCAL. [#6010]

• Moved ramp fit code to STCAL. [#6023]

• Now that ramp fitting has been moved to STCAL, for the JWST unit tests to pass need to use STCAL 0.2.1 or greater. The bug fix for JP-1920 were made in STCAL, which affected JWST unit tests for ramp fitting. [#6038]

refpix

• Added code to handle NIR subarrays that use 4 readout amplifiers. Uses and applies reference pixel signal from available amplifiers and side reference pixel regions, including odd-even column separation if requested [#5926]

• Fixed a bug introduced in #5926 that affected refpix calibration of 1-amp NIR subarrays [#5937]

• Added regression test and unit test for NIR 4-amp subarray correction [#5967]

resample

• Fix resample_spec output size from input images crossing RA=0 [#5929]

• Propagate variance arrays into SlitModel used as input for ResampleSpecStep [#5941]

• Remove certain WCS keywords that are irrelevant after resampling. [#5971]

• Propagate error and variance arrays in ResampleStep for imaging data. [#6036]

• Propagate error and variance arrays in ResampleSpecStep for 2D spectral data [#6041]

• Record pixel_scale_ratio and pixfrac from ResampleStep in header keywords PXSCLRT and PIXFRAC, respectively, or meta.resample.pixel_scale_ratio and meta.resample.pixfrac. [#6044]

source_catalog

• Updated the concentration indices to be calculated as flux ratios instead of magnitude differences. The CI column names have also been renamed to list the larger EE first, e.g. CI_50_30. [#5810]

• Aperture-corrected total fluxes and magnitudes are now computed for all sources. [#5996]

• Photometric errors are now computed using the new resampled total error array. [#5997]

• The nn_dist column was replaced by a nn_label column indicating the label number of the nearest neighbor. [#5998]

• The is_star column was replaced by a is_extended column with inverted boolean values. [#6018]

• Circular aperture sizes now scale in the case of non-native pixel scales in the resampled image. [#6045]

• Segmentation map output dtype is now uint32 [#6051]

srctype

• Added section for WFSS mode data to set srctype based on is_star value [#5788]

transforms

• Added is_star to GrismObject [#5788]

tweakreg

• Fix a bug due to models_grouped now returning odict_values instead of lists. [#6022]

• Updated documentation to include the new "rshift" option for fit geometry [#5899]

wfss_contam

• Implemented basic step structure to apply WFSS contamination corrections, along with the necessary grism library modules [#5508]

- Python
Published by jdavies-st over 4 years ago

jwst - JWST v1.1.0 (Build 7.7.1)

assign_mtwcs

• Fixed a bug which caused the step to fail with MultiSlitModel input. [#JP-1907]

assign_wcs

• Added velocity aberration-corrected frame 'v2v3vacorr' to the WCS pipeline which takes into account DVA effects. [#5602]

• Renamed MIRI frame 'V2_V3_spatial' to 'v2v3_spatial' and 'V2_V3_vacorr_spatial' to 'v2v3vacorr_spatial'. Added axes names to the 'v2v3' frame for nircam, niriss, miri, and fgs. Renamed axes for nirspec from V2 and V3 to v2 and v3. [#5765]

• Changed units of the 'v2v3' frame for nircam from u.deg to u.arcsec [#5765]

• Added spectral frames to the output WCS frame of TSO and WFSS observations. [#5771]

associations

• Warn about duplicate product names and do not write duplicate associations [#5721]

• Added new Lvl2 rule, Asn_Lv2NRSLAMPImage, to run Image2 pipeline for NRSLAMP exposures with OPMODE=image [#5740]

• Ignore duplicate product names while handling Level 2 associations [#5780]

• Constraint added to Asn_Lv3Coron to remove background exposures [#5781]

combine_1d

• Pull sourceid from input x1d headers (from sourcecatalog) to populate c1d output headers [#5759]

cube_build

• Added support for cross-dichroic configurations [#5722]

• Added infrastructure to support NIRSpec opaque + grating options to build lamp mode data [#5757]

• When building MIRI internal_cal type cubes removed the requirement that cdelt1=cdelt2 [#5757]

datamodels

• Updated keyword_readpatt, core, preadpatt schemas for new MIRI detector readout patterns 'FASTR1', 'FASTR100' and 'SLOWR1' [#5670]

• Added extrx and extry to multispec datamodel. These values are center of extraction region for IFU data [#5685]

• Added segmentation map output file name to core schema keywords, under keyword 'SEGMFILE' [#5730]

• Added '1LOS' to PATTTYPE enum list in core.schema datamodel [#5728]

• Added 'IMAGE' to OPMODE enum list [#5745]

• Added source_id to combinedspec and multicombinedspec schemas to populate combine1d output headers [#5759]

extract_1d

• Adding writing SRCTYPE, EXTRX, and EXTRY to extracted spec for IFU data [#5685]

• Only update the output x1d data using the PRIMARY input data. Prevents SCI data in x1d data [#5694]

• Fixed bug in background region fitting for image columns/rows that have zero weight for all pixels [#5696]

• Determine the background using sigma clipping of entire extended region for extended source IFU data [#5743]

group_scale

• Fix premature model closing in groupscalestep [#5692]

lib

• Make EngDB_Value public for JSDP use [#5669]

• Update code in set_velocity_aberration.py functions based on Colin Cox suggestions: simplify DVA scale computation and improve apparent RA and DEC aberrated position computation. Also, attributes ra_offset and dec_offset of datamodel.meta.velocity_aberration have been renamed to va_ra_ref and va_dec_ref and their corresponding FITS keywords have been renamed from DVA_RA and DVA_DEC to VA_RA and VA_DEC. [#5666]

• Make getwcsvaluesfromsiaf public for JSDP use [#5669]

outlier_detection

• Remove hard-coded MRS outlier detection values now that a parameter reference file exists. [#5753]

photom

• Fixed handling of NIRSpec IFU extended source data, so that the flux calibration gets converted to surface brightness [#5761]

pipeline

• Remove references to Numpy globals np.int, np.float, np.bool and np.str in the package. [#5769]

ramp_fitting

• Fixed bug in handling NGROUPS=2 exposures for pixels that saturate in group 2. Proper slope, err, and other quantities are now computed from the good data in group 1. [#5700]

• Update documentation to define optimal weighting algorithm [#5682]

resample

• Make inverse variance weight_type="ivm" the default weighting scheme for multiple exposures resampled into a single output. [#5738]

source_catalog

• Added the segmentation map as an output data file, with suffix "segm". [#5730]

srctype

• Changed default SRCTYPE for non-primary NIRSpec slits in a FIXEDSLIT exposure to 'EXTENDED' rather than 'POINT' [#5671]

• Changed logic for handling NIRSpec MOS exposures to blank out the "global" value of SRCTYPE, to ensure that only the individual slit-specific values of SRCTYPE get used downstream. [#5754]

stpipe

• Make jwst.stpipe independent of the rest of the jwst package and move core code to spacetelescope/stpipe. [#5695, #5720, #5752]

- Python
Published by jdavies-st almost 5 years ago

jwst - JWST Build 7.7.1 rc1

Final release notes are in the jwst v1.1.0 (Build 7.7.1) section.

- Python
Published by jdavies-st almost 5 years ago

jwst - JWST Build 7.7

Summary of changes in the 0.18.x release

Updates to Level-2a processing for all exposure modes

• Fixed bug in the minimum number of groups per integration for the jump detection step by changing it from 3 to 5
• Reworked the jump step to reduce memory usage
• Updated the rampfit step to add 'DONOT_USE' DQ flag to pixels that have all groups flagged as saturated
• Turned the MIRI "reset" step back on in the level-2a pipeline
• Updated the saturation step to use the A-to-D limit of 65535 as the saturation threshold for pixels flagged with "NOSATCHECK" in the saturation reference file
• Updated the saturation step to flag groups having values below the A-to-D floor (zero)

Updates to Level-2b processing for all exposure modes

• Enhance the flatfield step to flag MIRI imager NONSCIENCE pixels as DONOTUSE
• Enhancements to assign_wcs to add FITS SIP approximation keywords to imaging mode WCS

Updates to Level-2b spectroscopic (calwebb_spec2) processing

• Enable the resample_spec step for NIRSpec line lamp exposures
• Enhancements and bug fixes to the extract_1d step for extracting and applying aperture corrections to IFU mode data
• Bug fixes to the wavecorr step to produce correct wavelength shifts
• Enable processing of NRSLAMP exposures in the assignwcs and resample_spec steps
• Enhancements and bug fixes to cube_build for handling single cubes
• Bug fix for extract_1d when determining source RA/Dec in input resampled Slit data
• Enhanced extract_1d to use an extract1d reference file to guide processing for NIRCam TSGRISM exposures, allowing for column-by-column fitting and subtraction of background signal
• Bug fix for extract_1d when there's only one spectrum instance for a WFSS source
• Updated flatfield step branch logic to handle NRSLAMP as a spectroscopic exposure
• Updated NIRSpec fixed-slit processing in the flat_field and photom steps to compute and save correction values for both point and uniform sources in the primary slit when it contains a point source, in order to support master background corrections

Updates to the Level-3 imaging (calwebb_image3) processing

• Bug fix in outlier_detection to account for background signal when blotting the median-combined image back to individual exposure's space
• Bug fix in the skymatch step to prevent failures when attempting to compute statistics on a single pixel
• Implemented memory checks in the outlier_detection and resample steps to prevent the creation of huge arrays and subsequent memory allocation errors
• Added "pixelscaleratio" parameter to the resample step to allow for finer output grid
• Added support for the new fitting geometry mode "rshift" in the tweakreg step

Updates to the Level-3 spectroscopic (calwebb_spec3) processing

• Update the NIRSpec MOS master background logic to only proceed with processing after verifying that there are both background and source slits available in the input dataset
• Enhancement to the combine_1d step to produce separate extensions for each spectral order

Updates to the Level-3 TSO (calwebb_tso3) pipeline

• Updated the tsophotometry step to place the photometric aperture at the location given by the XREFSCI, YREF_SCI keyword values, instead of using CRPIX1, CRPIX2
• Fixed the flux units in the source_catalog output
• Updated the white_light step to allow for the specification of wavelength limits to restrict the portion of the spectrum used to compute the integrated flux

Updates to the Level-3 AMI (calwebb_ami3) pipeline

• Complete overhaul of the ami_analyze step to use the latest ImPlaneIA algorithms from the AMI WG
• Enhancements to the ami_analyze step to allow two user-settable parameter

Detailed notes

documentation

• Update documentation introduction to include installation and CRDS setup instructions. [#5659]

combine1d

• Fixed code error in combine1d, creating extensions per spectral order with the same input data [#5644]

ramp_fitting

• Fix a bug in estimating the max number of segments that will be needed to fit any pixel [#5653]

settelescopepointing

• Update the check in settelescopepointing that determines whether an exposure is TSO mode to always consider hardwired TSO EXP_TYPEs as TSO, regardless of TSOVISIT and NINTS settings. [#5657]

white_light

• Fixed error causing multi-segment data to reject int_times for MJDs [#5566]

- Python
Published by jdavies-st about 5 years ago

jwst - JWST Build 7.7 rc3

associations

• JWSTDMS-410 Asn_Lv2NRSLAMPSpectral: Break out the negative cases [#5635]

• Update MIRI LRS-Fixedslit ALONG-SLIT-NOD backgrounds strategies [#5620]

cube_build

• Do not allow varibles defined in spec (part of the cubebuildstep class) to be changed, to allow calspec2 to loop over a list of files and run the pipeline. [#5603]

datamodels

• Updated schemas for new keywords CROWDFLD, PRIDTYPE, PRIDTPTS, PATTNPTS, SMGRDPAT, changed name of SUBPXPNS to SUBPXPTS, and new allowed values for PATTTYPE. [#5618]

flat_field

• Added DONOTUSE to pixels flagged as NON_SCIENCE for non-NIRSpec data [#5601]

outlier_detection

• Account for the background subtracted data in the blot image for determining the noise image used in flagging outliers [#5601]

settelescopepointing

• Updated to populate XREFSCI, YREFSCI keywords for all TSO exposures, not just NRC_TSGRISM mode. [#5616]

- Python
Published by jdavies-st about 5 years ago

jwst - JWST Build 7.7 rc2

combine1d

• Output FITS now contains separate combine1d extensions for each spectral order present in the data [#5204]

datamodels

• Fix missing CHANNEL entry in distortion reffile schema. [#5553]

extract_1d

• For IFU data (NIRSpec and MIRI) the extraction radius is now a varying size based on wavelength. The apcorr correction is a function of wavelength and radius size. Fixes a bug in units conversion for applying the apcorr correction. The units are now correctly converted from arcseconds to pixels. Added an new method to apply the apcorr correction for IFU data. [#5506]

pipeline

• Removed all unnecessary parameter settings from cfg files for all steps and pipelines, and removed references to step config files from most pipeline modules (only kept those that are necessary for intended functionality). [#5574]

skymatch

• Fixed a bug due to which sky matching may fail under certain circumstances such as using 'mode' statistics on a single pixel (after sigma-clipping). [#5567]

stpipe

• Removed unused LinearPipeline class. [#5590]

wavecorr

• Fixed bugs in wavecorr. [#5570]

- Python
Published by jdavies-st about 5 years ago

jwst - JWST Build 7.7 rc1

ami

• Update code to use two new input parameters: psfoffset,rotationsearch [#5548]

• Update code and unit tests to use new ami_analyze algorithms [#5390]

• Update ami_analyze to extract a SUB80 subarray from full-frame images [#5437]

assign_wcs

• Add nrs_verify to the NIRSpec exposure list [#5403]

• Enable resample_spec for NIRSpec line lamp exposures [#5484]

• Added SIP approximation to WCS for imaging modes. FITS WCS keywords added to meta.wcsinfo. [#5507]

• Fix bug where subarray bounding boxes were 1 pixel too small. [#5543]

• Mark Nirspec slits which project on less than one pixel as invalid. [#5554]

associations

• Add new dither keyword subpxpts to constraints [#5525]

• Add further constraints to rule Asn_Lv2NRSLAMPSpectral such that associations are created only when LAMP is on and OPMODE indicates a valid optical path. [#5496]

• Restrict association creation based on optical path for NIRSpec Fixed-slit and IFU [#5504]

• Asn_Lv3SpecAux: Add optical element constraint [#5479]

• Add utility asn_gather [#5468]

• Do not allow target acqs to be considered TSO [#5385]

• Add NRS_VERIFY to the list of target acq/confirmation images [#5395]

cube_build

• When making SINGLE type cubes for outlier detection or mrs_imatch data not in the appropriate channel/grating is skipped [#5347]

• If outlier detection has flagged all the data on a input file as DONOTUSE, then skip the file in creating an ifucube [*5347]

• Refactor DataTypes handling of ModelContainer. [#5409]

datamodels

• Skip serializing None in datamodels to be compatible with asdf>=2.8 [#5371]

• Implement full class deprecator decorator and use for MIRIRampModel [#5382]

• Add NRSVERIFY to the core schema as an allowed EXPTYPE [#5395]

• Remove logging from DataModel.close [#5413]

• Updated keyword schemas for EXP_TYPE and MODULE, to keep in sync with the JWST Keyword Dictionary [#5452]

• Added flatfield and photom correction arrays to slit data models [#5460]

• Move core jwst.datamodels code to stdatamodels package and add it as an install dependency [#5433]

• Update schemas to include new allowed SUBARRAY values for FGS ASIC tuning modes [#5531]

• Add meta.visit.pointingengdbquality entry to correspond to ENGQLPTG keyword [#5556]

• Update Moving Target CHEBY table extension schema for changes to column definitions in the JWSTKD and SDP [#5558]

extract_1d

• Fixed bug involving the determination of source RA/Dec for resampled Slit data. [#5353]

• Updated to use an EXTRACT1D reference file for NIRCam TSGRISM exposures; added step param "bkg_fit" to allow for mean and median options in background computation, in addition to the existing polynomial fit; fixed bug in background computation that was preventing background subtraction from ever happening. [#5414]

• Fixed bug involving the processing of WFSS observations when there's only one spectrum instance for a given source. [#5439]

fits_generator

• Addressed deprecated get_children method of XML parser. Changed type of PATTSIZE from float to string in templates. [#5536]

flatfield

• Fixed bug in sending NIRSpec AUTOWAVE exposures to the spectroscopic processing branch. [#5356]

• Updated branch logic to handle NRS_LAMP exposures as spectroscopic. [#5370]

• Updated NIRSpec fixed-slit processing to compute and save correction values for both point and uniform sources in the primary slit when it contains a point source, in order to support master background corrections. [#5462]

jump

• Fixed bug in the minimum number of groups per integration for the jump detection step by changing it from 3 to 5. [#5376]

• Various rework to reduce memory usage and increase readability. [#5404]

master_background

• Update the NIRSpec MOS master background logic to only proceed with processing after verifying that there are both background and source slits available in the input dataset. [#5370]

outlier_detection

• Implement memory check in resample to prevent huge arrays [#5354]

photom

• Updated NIRSpec fixed-slit processing to compute and save correction values for both point and uniform sources in the primary slit when it contains a point source, in order to support master background corrections. [#5463]

pipeline

• Update Image3Pipeline to allow sky subtraction when input contains only one image (group). [#5423]
• Enable resample_spec for NIRSpec line lamp exposures in Spec2Pipeline [#5484]

ramp_fitting

• Update to store output as an IFUImageModel for NIRSpec AUTOWAVE exposures using the IFU mode. [#5356]

• Update to add 'DONOTUSE' DQ flag to pixels with all groups flagged as saturated. [#5367]

resample

• Implement memory check in resample to prevent huge arrays [#5354]

• Add pixel_scale_ratio parameter to allow finer output grid. [#5389]

• Enable resample_spec for NIRSpec line lamp exposures [#5484]

reset

• Turn the step back on for the calwebb_detector1 pipeline [#5485]

saturation

• Set saturation threshold to A-to-D limit of 65535 for pixels flagged with NOSATCHECK in the saturation reference file, instead of skipping any test of those pixels. [#5394]
• Flag groups values below A/D floor (0 DN) (#5422)

settelescopepointing

• Add logging of the found quaternion information [#5495]
• Handle cases where engineering database's pointing mnemonics are all zero over the requested time range [#5540]
• Set value of keyword ENGQLPTG to CALCULATED or PLANNED depending on whether pointing telemetry was used to update the WCS [#5556]

skymatch

• Fix a bug in skymatch that would result in a crash when skymethod contains 'global' and the single image group's sky cannot be computed (e.g., because all pixels are flagged as "bad"). [#5440]

stpipe

• Implement utility function all_steps and fix crds reference file retrieval for non-datamodels [#5492]

tso_photometry

• Place aperture using header keywords XREFSCI and YREFSCI instead of CRPIX1 and CRPIX2 [#5533]

• Fixed the flux units in the output photometry catalog. [#5529]

tweakreg

• Add support for the new fitgeom mode: 'rshift' that can fit only for shifts and a rotation. [#5475]

wfs_combine

• Add checking for bad pixels by using DONOTUSE rather than DQ>0. [#5500, #5519]

white_light

• Add support for step parameters min_wavelength and max_wavelength to modify the wavelength region over which the flux integration is calculated. [#5501]

- Python
Published by jdavies-st about 5 years ago

jwst - JWST Build 7.6

Release Notes

The JWST calibration pipeline (v0.17.1) has been made available on PyPi and Github. A high-level list of updates in this build is given below.

Association generator rules have been updated to:

• Fix incorrect product names for level-3 IFU products

Updates to Level-2a processing for all exposure modes include:

• Enabled creation of the "rateints" product for all exposures, even when NINTS=1

Updates to Level-2b processing for all exposure modes include:

• Enabled application of the "filteroffset" correction for NIRCam and NIRISS imaging modes in the assign_wcs step
• The flat-field step has been updated to set DQ='DONOTUSE' for reference file pixels that have values of NaN or zero, as well as reference file pixels flagged as 'NO_FLAT'.

Updates to Level-2b spectroscopic (calwebb_spec2) processing include:

• The ability to perform master background subtraction for NIRSpec MOS exposures
• The ability to process NIRSpec internal lamp exposures
• Improved calculation of bounding boxes for grism images in the assign_wcs step
• Updated the assign_wcs step to allow for user-settable extraction heights in grism (WFSS) images
• The ability to apply minimal processing of MIRI MRS TSO exposures
• Changed the default weighting in the cube_build step to "emsm"
• The ability to perform aperture corrections for point source extracted spectra in the extract_1d step
• Bug fixes in flat-fielding for NIRSpec fixed-slit exposures

Updates to the Level-3 imaging (calwebb_image3) processing include:

• The outlier_detection step has been fixed so that it does not subtract background from the science data

Updates to the Level-3 spectroscopic (calwebb_spec3) processing include:

• Implemented corrections to master background subtraction for NIRSpec IFU exposures
• Updated the master_background step to allow for saving of the 2D master background data

Updates to the Level-3 Coronagraphic (calwebb_coron3) pipeline include:

• Implemented bad pixel replacement in the alignrefs step **Updates to the Level-3 TSO (calwebbtso3) pipeline include:**

• Fixed a bug in the computation of integration time stamps

Complete change log:

associations

• Add product name override to the IFUGratingBkg class, to prevent the default "clear" suffix showing up in NIRSpec IFU product names. [#5326]

barshadow

• Implement using a user-supplied correction which overrides all references. [#5302]

• Implement applying the inverse operation. [#5302]

blendmeta

• Do not close files that were not opened by blendmodels [#5299]

cube_build

• If every wavelength plane of the IFU cube contains 0 data, cube_build is skipped [#5294]

• Remove "clear" suffix from MIRI MRS product name templates [#5326]

flat_field

• Update how the flat field reference dq mask is used for NIRSpec MOS data [#5284]

• Implement providing a user-supplied flat field which overrides all references. [#5302]

• Implement applying the inverse operation. [#5302]

master_backround

• Create new step MasterBackgroundNrsSlits step to handle NIRSpec MOS data in Spec2Pipeline [#5317]

• Implement option to save the 2d version of the calculated master background [#5317]

outlier_detection

• Fix bug where background was being subtracted on the input data [#4858]

pathloss

• Implement using a user-supplied correction which overrides all references. [#5302]

• Implement applying the inverse operation. [#5302]

photom

• Implement using a user-supplied correction which overrides all references. [#5302]

• Implement applying the inverse operation. [#5302]

pipeline

• Spec3Pipeline check whether master background subtraction has already occurred. [#5308]

• Implement master background subtraction in Spec2Pipeline for NIRSpec MOS data. [#5302]

• Include the per-slit failure traceback in any RuntimeError raised in Spec2Pipeline. [#5315]

ramp_fitting

• Reinstate copying of INT_TIMES table to output rateints product for TSO exposures. [#5321]

tso_photometry

• Fix a bug in the computation of integration time stamps when the INT_TIMES table is not available. [#5318]

- Python
Published by jdavies-st over 5 years ago

jwst - JWST Build 7.6 rc1

Release Notes

align_refs

• Add bad pixel replacement for target and psf images [#4973]

assign_mtwcs

• Skip the step if any input MT_RA/DEC keyword values are missing. [#5015]

assign_wcs

• Enabled filteroffset correction for NIRISS and NIRCAM imaging modes. [#5018, #5027]

• Pass an optional input_frame parameter in assign_wcs.util.wcs_from_footprintss. [#5120]

• Improved calculation of bounding boxes in grism images. [#5122]

• Added two new optional parameters to utils.cerate_grism_bbox - wfss_extract_half_height and wavelength_range. [#5140]

• Shifted the bounding box of a resampled WCS by - 0.5 px to account for the center of the pixel. [#5241]

• Enable NIRSpec lamp processing in calspec2 pipeline. [#5267]

associations

• Update diagrams in documentation to change sloper to detector1. [#4986]

• Update level-3 rules to exclude IFU exposures from calwebb_tso3 associations. [#5202]

• Fix formatting error in Asn_IFUGrating product name construction. [#5231]

barshadow

• Correct bar shadow parity bug for yslit. [#5095]

combine_1d

• Skip spectra that are degenerate when combining [#5037]

cube_build

• Changed default weighting to 'emsm'. [#5277]

• Fixed formatting of NIRSpec s3d output product names. [#5231]

• Modified NIRSpec blotting to the find min and max ra and dec for each slice and only invert those values on slice that fall in range [#5144]

• Changed default weighting back to 'msm' until NIRSPEC cube pars ref file contains emsm info [#5134]

• Added checks read from cube pars reference file that parameters have valid data [#5134]

• Change the name of default cube type from world to skyalign [#4974]

• Add ifualign cubes to be cubes rotated on sky to align with ifu instrument plane [#4974]

• Change the name of MIRI alpha-beta cube type to internal_cal [#4974]

• Add ability to make NIRSpec internal_cal ifu cubes aligned with slicer plane [#4974]

• Change default weighting from msm to emsm [#4974]

• NIRSpec IFU cubes built from all wavelengths rather than those defined in cube par ref file [#4974]

• Removed wavelength planes that contained only 0 data. These planes are edge cases [#4974]

datamodels

• Add iscopy to ModelContainer init [#5256]

• Re-enable FITS-hash by default. [#5191]

• Add blend rule for keywords DETECTOR and MODULE. [#4998]

• Add methods Model.info and Model.search. [#4660]

• Trim MTRA, MTDEC keyword comments to fit within FITS record. [#4994]

• Add enum list and default value of 'NONE' for meta.instrument.lamp_mode [#5022]

• Add TIMEUNIT keyword to schemas. [#5109]

• Split pathloss object into pathloss_ps and pathloss_un in schemas. [#5112]

• Add "PERSISTENCE" DQ flag definition. [#5137]

• Fix nonsensical premature closing of FITS file of a DataModel. [#4930]

• Add a hash set/check to DataModel I/O to check whether schema traversal is necessary. [#5110]

• Update underlying MultiExposureModel from the SourceModelContainer models. [#5154]

• Add new MIRI LRS dither patterns to PATTTYPE enum list. [#5254]

extract_1d

• Implement aperture corrections in the Extract1dStep. [#4902]

• Fix bug in creating a polynomial fit used in background extraction. [#4970]

• Recheck the input model container in run_extract1d to select the correct processing [#5076]

• Rework/refactor many functions for style and readability. [#5079]

• Checks subwcs and new_slit variables exist before trying to delete them. [#5093]

• Parameter mmag_extract is now propagated to the extraction routine. [#5122]

• Updated the logic for when and how to use the source position to offset the location of the extraction regions specified in the EXTRACT1D reference file. [#5157]

• Fixed the conversion of flux to surface brightness for IFU extended source case [#5201]

• Fixed bugs in aperture correction for NIRSpec multi-slit modes. [#5260]

extract_2d

• Check that subwcs and new_slit variables exist before trying to delete them [#5093]

• Move NIRSpec wavecorr routines to the wavecorr step. [#5133]

• Added a new optional integer parameter to extract2d (``wfssextracthalfheight``) which allows a user to specify the extraction height in the cross-dispersion direction for WFSS mode. [#5140]

flat_field

• For NIRSpec BOTS and ALLSLITS add the slit start corner to the subarray start corner when determining what region of the flat_field reference files to extract. [#5269]

• Enable NIRSpec lamp processing in calspec2 pipeline. [#5267]

fringe

• Update the fringe step to handle 3D inputs for MIRI MRS TSO mode. [#5202]

master_background

• Fix open files bug [#4995]

• Update to include pathloss corrections to NIRSpec IFU background [#5125]

mrs_imatch

• MRSIMatchStep to create its ModelContainers with iscopy=True [#5256]

outlier_detection

• Update median filter to use numpy's nanmedian. [#5114]

• Fix outlier_detection bug when saving intermediate results. [#5108]

• Update logic to correctly handle input CubeModel that have only 1 integration. [#5211]

pathloss

• Fix bug in NIRSpec IFU data that causes valid pixel dq flags to set to NON-SCIENCE in the region of an overlapping bounding box slice [#5047]

• Update to save both point source and uniform source 2D pathloss correction arrays to output. [#5112]

persistence

• Flag pixels with high persistence using "PERSISTENCE" DQ flag instead of "DONOTUSE". [#5137]

pipeline

• Refactor the Image3Pipeline to use stpipe infrastructure. [#4990]

• Fix Coron3Pipeline to blend headers just from each input science model, not every integration. [#5007]

• Fix open files bug in get_config_from_reference class method, and in Spec2Pipeline, Spec3Pipeline and tso3. [#4995]

• Update calwebb_tso3 to do more robust checking of input data type. [#5107]

• Update the Spec2Pipeline to include the new wavecorr step and put srctype before wavecorr. [#5133]

• Update the Spec2Pipeline to skip extract_1d for IFU data that have not had a cube built (e.g. MIRI MRS TSO), and update the calwebb_tso-spec2.cfg configuration to turn on the fringe step and turn off cube_build for MIRI MRS TSO. [#5202]

• Update the Coron3Pipeline logic to correctly handle inputs that have only 1 integration. [#5211]

• Refactor Spec2Pipeline for execution logic and step flow isolation [#5214]

• Update Ami3Pipeline to only process psf and science members from the input ASN. [#5243]

• Enable NIRSpec lamp processing in calspec2 pipeline. [#5267]

photom

• Fix bug in NIRSpec IFU data that causes valid pixel dq flags to set to NON-SCIENCE in the region of an overlapping bounding box slice [#5047]

ramp_fitting

• Add multi-processing capability. [#4815]

• Fix crash when DRPFRMS1 is not set [#5096]

• Update to always create the rateints product, even when NINTS=1. [#5211]

resample_spec

• Fix artifacts in resampled NIRSpec slit data caused by NaNs in the WCS [#5217]

source_catalog

• Use gwcs.WCS instead of FITS WCS. [#5120]

• Changed the type of column is_star from float to bool. [#5140]

• Implemented algorithm for determining whether a source is a star. [#5234]

stpipe

• Limit reference file prefetch to the first "science" exptype when a pipeline has an association as input. [#5031]

• Remove further sloper references. [#4989]

• Enable prefetch of pars reference files for associations. [#5249]

transforms

• Wrap first spherical angle ("RA") at 360 degrees in the forward V23ToSky transformation and to 180 degrees for the inverse transformation ("V2"). This is now done using models defined in astropy and gwcs packages replacing V23ToSky model in JWST's WCS pipeline. [#5206]

wavecorr

• Implemented the wavecorr step by pulling routines from the extract_2d step. [#5133]

- Python
Published by jdavies-st over 5 years ago

jwst - JWST build 7.5

Release Notes

Highlights

The Level-1b script "settelescopepointing" has been updated to insert moving target coordinate keywords into level-1b product headers when the coordinate data is available in a moving target position table extension provided by SDP.

Association generator rules have been updated to:

• Limit NIRSpec IFU level 3 associations to contain data from a single grating+filter combination
• Produce level 2b and 3 associations for nodded observations for all spectroscopic modes
• Exclude dark exposures from all associations

Updates to Level-2a processing for all exposure modes include:

• Significant reduction in the memory footprint for processing of all exposure types

Updates to Level-2b processing for all exposure modes include:

• Populate ASNPOOL and ASNTABLE keywords for all products using an ASN to drive processing

Updates to Level-2b spectroscopic (calwebb_spec2) processing include:

• Bug fixes and refactoring of WCS transforms for WFSS exposures

Updates to the Level-3 imaging (calwebb_image3) processing include:

• Only load science and background members from an input ASN file
• The new capability to align image WCS to the Gaia catalog
• Added new capability to align moving target exposures in the moving target coordinate frame
• Source catalog generation has been completely rewritten to include new types of source measurements
• Updates to several steps to make them more robust to garbage data
• Many bug fixes to the creation of combined/resampled NIRSpec and MIRI LRS spectra

Updates to the Level-3 spectroscopic (calwebb_spec3) processing include:

• Update level-2b source-based products to include metadata from input exposures
• 1-D extracted products for WFSS mode now contain all data for a given source in a single x1d product
• Combined 1-D products for WFSS mode use the new product type suffix "c1d"
• Updated mrs_imatch to make it more robust to data that is out of specification

Updates to the Level-3 WFS&C (calwebb_wfs-image3) pipeline include:

• Updated the ASNTABLE keyword in all combined (wfscmb) image products

Full Release notes

assign_wcs

• Update keyword and attribute usage around SkyObject to reflect updated keywords. [#4943]
• Refactor PPS origin of NIRSpec MOS shutters from top left to bottom left. [#4959] associations
• Modify NIRSpec IFU level-3 ASN rules to include only one grating per association [#4926]

calwebb_coron3

• Update coron3 for new outlier detection application [#4968]

datamodels

• Add to_container to CubeModel to convert a cube to a list of images [#4968]
• Add getarray_noinit to DataModel to access arrays without causing initialization [#4968]
• Limit looping over HDU's while resolving arrays in schema [#4951]
• Relax asdf requirement and use validator flag when asdf 2.6.x is installed [#4905]
• Updated core schema to include recent Keyword Dictionary changes (remove TIME-END; add TDB-BEG, TDB-MID, TDB-END, XPOSURE, TELAPSE) [#4925]
• Populate meta.asn.table_name when an association is loaded into a ModelContainer. [#4873]

extract_1d

Add aperture correction in extract_1d processing. [#4902]

lib

Update SkyObject keys. [#4943]

mrs_imatch

Fix mrsimatch to avoid calls to sigmaclipped_stats with all-zero arrays. [#4944]

photom

Fix flux units in photom for MultiSlit cases. [#4958]

pipeline

Updated calwebbimage3 pipeline to only load science and background member types from an input ASN. [#4937] Updated the calwebbspec2 pipeline to only use the basename of the source catalog file when updating the source_catalogue keyword for WFSS inputs. [#4940]

rscd

Fixed bug when the READPATT/SUBARRAY data is not found in RSCD reference file [#4934]

source_catalog

Add more concentration indices and update step docs. [#4906, #4908] Added fallback background estimation method to make background estimation moare robust. [#4929] Fixed the nearest-neighbor code to handle the case of exactly one detected source. [#4929] Update abmag error calculation. [#4945] Exit gracefully if APCORR ref file is missing. [#4948]

tweakreg

Added aligntogaia processing as an option [#4599]

- Python
Published by nden over 5 years ago